ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1j20 |
|---|---|
| Clone Library Name | barley_pub |
>FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 365 Score = 67.8 bits (164), Expect = 7e-12 Identities = 30/42 (71%), Positives = 34/42 (80%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + DIMV LAA+DGI+W DYKKQLKKAEQWNVEVY Sbjct: 324 GLKGMEKGIDDIMVSLAAEDGIDWFDYKKQLKKAEQWNVEVY 365 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 320 VYMCGLKGMEK 288 VYMCGLKGMEK Sbjct: 320 VYMCGLKGMEK 330
>FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 67.4 bits (163), Expect = 9e-12 Identities = 30/42 (71%), Positives = 33/42 (78%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + DIMV LAAKDGI+W DYKKQLKK EQWNVEVY Sbjct: 321 GLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 320 VYMCGLKGMEK 288 VYMCGLKGMEK Sbjct: 317 VYMCGLKGMEK 327
>FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 360 Score = 65.1 bits (157), Expect = 4e-11 Identities = 28/42 (66%), Positives = 34/42 (80%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + DIMV LAAKDGI+W++YK+ LKKAEQWNVEVY Sbjct: 319 GLKGMEKGIDDIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 320 VYMCGLKGMEK 288 VYMCGLKGMEK Sbjct: 315 VYMCGLKGMEK 325
>FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 369 Score = 63.5 bits (153), Expect = 1e-10 Identities = 27/42 (64%), Positives = 34/42 (80%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + DIMV LAA +GI+W++YK+QLKKAEQWNVEVY Sbjct: 328 GLKGMEKGIDDIMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY 369
>FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 60.5 bits (145), Expect = 1e-09 Identities = 25/42 (59%), Positives = 32/42 (76%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + DIMV + KDGI+W++YK+ LKKAEQWNVEVY Sbjct: 322 GLKGMEKGIDDIMVSIRPKDGIDWIEYKRTLKKAEQWNVEVY 363 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 320 VYMCGLKGMEK 288 VYMCGLKGMEK Sbjct: 318 VYMCGLKGMEK 328
>FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 59.3 bits (142), Expect = 2e-09 Identities = 27/42 (64%), Positives = 31/42 (73%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + +IM LA +DGI W DYKKQLKKAEQWNVEVY Sbjct: 321 GLKGMEQGIDEIMSALAERDGIVWADYKKQLKKAEQWNVEVY 362
>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 44.3 bits (103), Expect = 8e-05 Identities = 19/42 (45%), Positives = 25/42 (59%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GLR + AAK+G+ W DY+K LKKA +W+VE Y Sbjct: 399 GLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440
>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 44.3 bits (103), Expect = 8e-05 Identities = 19/42 (45%), Positives = 25/42 (59%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GLR + AAK+G+ W DY+K LKKA +W+VE Y Sbjct: 399 GLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440
>FENR_ANASO (P21890) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 44.3 bits (103), Expect = 8e-05 Identities = 19/42 (45%), Positives = 25/42 (59%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GLR + AAK+G+ W DY+K LKKA +W+VE Y Sbjct: 399 GLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440
>FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 294 Score = 37.7 bits (86), Expect(2) = 5e-04 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + M A K ++W DY+K+LKK +W+VE Y Sbjct: 253 GLKGMEGGIDEGMSAAAGKFDVDWSDYQKELKKKHRWHVETY 294 Score = 23.1 bits (48), Expect(2) = 5e-04 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -1 Query: 317 YMCGLKGME 291 Y+CGLKGME Sbjct: 250 YICGLKGME 258
>FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 402 Score = 35.4 bits (80), Expect(2) = 6e-04 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + + A K G+NW + ++ +KK +W+VEVY Sbjct: 361 GLKGMQPPIDETFTAEAEKRGLNWEEMRRSMKKEHRWHVEVY 402 Score = 25.0 bits (53), Expect(2) = 6e-04 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1 Query: 320 VYMCGLKGME 291 VYMCGLKGM+ Sbjct: 357 VYMCGLKGMQ 366
>FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 386 Score = 34.3 bits (77), Expect(2) = 0.001 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDY-KKQLKKAEQWNVEVY 182 GLR + M AAK+G +W ++ K LKK +W+VE Y Sbjct: 344 GLRGMEPGIDEAMTAAAAKNGADWQEFLKGTLKKEGRWHVETY 386 Score = 25.0 bits (53), Expect(2) = 0.001 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1 Query: 320 VYMCGLKGME 291 VYMCGL+GME Sbjct: 340 VYMCGLRGME 349
>FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 33.9 bits (76), Expect(2) = 0.002 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GLR M D+A +G W K LKK ++W+VE Y Sbjct: 322 GLRGMEDGIQQCMEDIAKANGTTWDAVVKGLKKEKRWHVETY 363 Score = 25.0 bits (53), Expect(2) = 0.002 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1 Query: 320 VYMCGLKGME 291 VYMCGL+GME Sbjct: 318 VYMCGLRGME 327
>FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 413 Score = 33.5 bits (75), Expect(2) = 0.003 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ + LA ++G W +++++KK +W+VE Y Sbjct: 372 GLKGMEPGIDEAFTALAEQNGKEWTTFQREMKKEHRWHVETY 413 Score = 24.6 bits (52), Expect(2) = 0.003 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1 Query: 317 YMCGLKGME 291 YMCGLKGME Sbjct: 369 YMCGLKGME 377
>FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 377 Score = 35.4 bits (80), Expect(2) = 0.011 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GLR + + +A K G +W + QLKK +QW+VEVY Sbjct: 336 GLRGMMPGIQETLKRVAEKRGESWEEKLSQLKKNKQWHVEVY 377 Score = 20.8 bits (42), Expect(2) = 0.011 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = -1 Query: 320 VYMCGLKGM 294 +Y CGL+GM Sbjct: 332 IYFCGLRGM 340
>FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 33.9 bits (76), Expect(2) = 0.014 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ D + +A + G +W QLKK +QW+VEVY Sbjct: 337 GLKGMMPGIQDTLKKVAEQRGESWEQKLSQLKKNKQWHVEVY 378 Score = 21.9 bits (45), Expect(2) = 0.014 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 Query: 320 VYMCGLKGM 294 +Y CGLKGM Sbjct: 333 IYFCGLKGM 341
>FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 375 Score = 33.9 bits (76), Expect(2) = 0.014 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ D + +A + G +W QLKK +QW+VEVY Sbjct: 334 GLKGMMPGIQDTLKRVAERRGESWEQKLSQLKKNKQWHVEVY 375 Score = 21.9 bits (45), Expect(2) = 0.014 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 Query: 320 VYMCGLKGM 294 +Y CGLKGM Sbjct: 330 IYFCGLKGM 338
>FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 33.5 bits (75), Expect(2) = 0.018 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ D + +A + G +W QLKK +QW+VEVY Sbjct: 337 GLKGMMPGIQDTLKRVAEQRGESWEQKLSQLKKNKQWHVEVY 378 Score = 21.9 bits (45), Expect(2) = 0.018 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 Query: 320 VYMCGLKGM 294 +Y CGLKGM Sbjct: 333 IYFCGLKGM 341
>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 354 Score = 32.7 bits (73), Expect(2) = 0.050 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -2 Query: 307 GLRAWRRAXXDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 182 GL+ D++ +A + G+N+ ++ + LK QW+VEVY Sbjct: 313 GLKGMMPGIQDMLERVAKEKGLNYEEWVEGLKHKNQWHVEVY 354 Score = 21.2 bits (43), Expect(2) = 0.050 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 Query: 320 VYMCGLKGM 294 +Y CGLKGM Sbjct: 309 MYFCGLKGM 317
>Y013_NPVAC (P41423) Hypothetical 38.7 kDa protein in PK1-LEF1 intergenic| region Length = 327 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 Query: 262 LAAKDGINWLDYKKQLKKAEQWNVEVY*SSSSCHCH 155 +AA+D N DYKK A+QW+ V S C+ H Sbjct: 20 IAAEDRFNADDYKKYHINAQQWSHIVKWDSFKCNTH 55
>SRE27_CAEEL (O62488) Serpentine receptor class epsilon-27 (Protein sre-27)| Length = 364 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -1 Query: 188 GLLIIIIVSLP-WKDMHANVFPT*FSFLLQM 99 G+ + + S+P WK + N FP+ F FL+++ Sbjct: 298 GICTVAMYSIPAWKKRYKNAFPSIFCFLMRL 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,704,492 Number of Sequences: 219361 Number of extensions: 573283 Number of successful extensions: 1283 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1282 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
