ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1j16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_627368.1| Cryptosporidium parvum Iowa II hypothetical pro... 48 0.037
2dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 46 0.15
3gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 46 0.15
4ref|XM_493895.1| Oryza sativa (japonica cultivar-group), predic... 44 0.58
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
6dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
7dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 44 0.58
8ref|NM_120061.1| Arabidopsis thaliana hydrolase, hydrolyzing O-g... 42 2.3
9gb|DQ490515.1| Emericella nidulans alpha-galactosidase (AN8138-2... 42 2.3
10ref|XM_676315.1| Aspergillus nidulans FGSC A4 alpha-galactosidas... 42 2.3
11emb|CT009641.2| Pan troglodytes chromosome X BAC PTB-007I17, com... 42 2.3
12emb|CR683301.2|CNS0FQ6P Tetraodon nigroviridis full-length cDNA 42 2.3
13ref|XM_660787.1| Cryptosporidium hominis TU502 Myb-like DNA-bind... 42 2.3
14emb|CR648095.2|CNS0EZ1H Tetraodon nigroviridis full-length cDNA 42 2.3
15emb|CR639300.2|CNS0ES96 Tetraodon nigroviridis full-length cDNA 42 2.3
16emb|CR962120.1|PTB065B04 Pan troglodytes chromosome X BAC PTB-06... 42 2.3
17emb|Z93848.1|HSU35G3 Human DNA sequence from clone LL0XNC01-35G3... 42 2.3
18emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chro... 42 2.3
19gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 42 2.3
20emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, ... 42 2.3
21emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, B... 42 2.3
22gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell ... 42 2.3
23gb|AY059825.1| Arabidopsis thaliana putative endo-1, 4-beta-gluc... 42 2.3
24emb|BX826717.1|CNS0A45J Arabidopsis thaliana Full-length cDNA Co... 42 2.3
25gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 42 2.3
26gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 42 2.3
27emb|AL732498.15| Mouse DNA sequence from clone RP23-323E6 on chr... 42 2.3
28ref|XM_420183.1| PREDICTED: Gallus gallus similar to Alpha-galac... 40 9.0
29gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 9.0
30emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 40 9.0
31ref|XM_799551.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.0
32ref|XM_808666.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.0
33emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encepha... 40 9.0
34emb|BX323577.16| Zebrafish DNA sequence from clone CH211-277N6 i... 40 9.0
35emb|BX323037.10| Zebrafish DNA sequence from clone DKEYP-8B6 in ... 40 9.0
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
38gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, comple... 40 9.0
39gb|AF373806.1| Sinorhizobium meliloti GTP cyclohydrolase/3,4-dih... 40 9.0
40ref|XM_218601.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 9.0
41dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.0
42dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
43dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
44dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
45ref|XM_317857.2| Anopheles gambiae str. PEST ENSANGP00000014192 ... 40 9.0
46ref|XM_310816.2| Anopheles gambiae str. PEST ENSANGP00000008011 ... 40 9.0
47ref|XM_309208.2| Anopheles gambiae str. PEST ENSANGP00000005397 ... 40 9.0
48dbj|AK072932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
49dbj|AK070960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
50emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 9.0
51gb|AF006190.1|AF006190 Heliothis virescens GABA-gated chloride c... 40 9.0

>ref|XM_627368.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4840),
            partial mRNA
          Length = 7230

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 134  gaagttgaagttgtagctgttgat 157
            ||||||||||||||||||||||||
Sbjct: 6802 gaagttgaagttgtagctgttgat 6779



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 378     gagatgctgatctgcgcgccgaggccgagct 408
               ||||||| ||||| |||||||||||||||||
Sbjct: 2804480 gagatgccgatctccgcgccgaggccgagct 2804510



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 378     gagatgctgatctgcgcgccgaggccgagct 408
               ||||||| ||||| |||||||||||||||||
Sbjct: 2827302 gagatgccgatctccgcgccgaggccgagct 2827332



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>ref|XM_493895.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 513

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 540 gccgccgtggtggccatggtga 561
           ||||||||||||||||||||||
Sbjct: 387 gccgccgtggtggccatggtga 366



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 540    gccgccgtggtggccatggtga 561
              ||||||||||||||||||||||
Sbjct: 937554 gccgccgtggtggccatggtga 937575



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>dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122C02, full
           insert sequence
          Length = 865

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 540 gccgccgtggtggccatggtga 561
           ||||||||||||||||||||||
Sbjct: 452 gccgccgtggtggccatggtga 431



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>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 540   gccgccgtggtggccatggtga 561
             ||||||||||||||||||||||
Sbjct: 27951 gccgccgtggtggccatggtga 27972



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>ref|NM_120061.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
           AT4G39010 mRNA, complete cds
          Length = 1835

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 530 gtcgttgacggccgccgtggtggccatggtgag 562
           |||| ||||||||||||||||||  ||||||||
Sbjct: 70  gtcggtgacggccgccgtggtggtgatggtgag 38



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>gb|DQ490515.1| Emericella nidulans alpha-galactosidase (AN8138-2) mRNA, complete cds
          Length = 2253

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 516  ttctcggcggaggtgtcgttgacgg 540
            ||||| |||||||||||||||||||
Sbjct: 1313 ttctcagcggaggtgtcgttgacgg 1289



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>ref|XM_676315.1| Aspergillus nidulans FGSC A4 alpha-galactosidase C precursor
            (AN8138.2), mRNA
          Length = 2253

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 516  ttctcggcggaggtgtcgttgacgg 540
            ||||| |||||||||||||||||||
Sbjct: 1313 ttctcagcggaggtgtcgttgacgg 1289



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>emb|CT009641.2| Pan troglodytes chromosome X BAC PTB-007I17, complete sequence
          Length = 68055

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 548   ggtggccatggtgagcacggtggtg 572
             ||||| |||||||||||||||||||
Sbjct: 15338 ggtggtcatggtgagcacggtggtg 15362



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>emb|CR683301.2|CNS0FQ6P Tetraodon nigroviridis full-length cDNA
          Length = 815

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 tcaccttcttctccatggtct 345
           |||||||||||||||||||||
Sbjct: 160 tcaccttcttctccatggtct 140



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>ref|XM_660787.1| Cryptosporidium hominis TU502 Myb-like DNA-binding domain
            (Chro.80556) partial mRNA
          Length = 5922

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 134  gaagttgaagttgtagctgttgatg 158
            |||| ||||||||||||||||||||
Sbjct: 5524 gaagctgaagttgtagctgttgatg 5500



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>emb|CR648095.2|CNS0EZ1H Tetraodon nigroviridis full-length cDNA
          Length = 1458

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 tcaccttcttctccatggtct 345
           |||||||||||||||||||||
Sbjct: 852 tcaccttcttctccatggtct 832



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>emb|CR639300.2|CNS0ES96 Tetraodon nigroviridis full-length cDNA
          Length = 1478

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 tcaccttcttctccatggtct 345
           |||||||||||||||||||||
Sbjct: 861 tcaccttcttctccatggtct 841



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>emb|CR962120.1|PTB065B04 Pan troglodytes chromosome X BAC PTB-065B04, complete sequence
          Length = 35005

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    attgatgataattaagataaa 79
             |||||||||||||||||||||
Sbjct: 24109 attgatgataattaagataaa 24129



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>emb|Z93848.1|HSU35G3 Human DNA sequence from clone LL0XNC01-35G3 on chromosome X
           Contains the 5' end of a gene for the possible ortholog
           of mouse glycine receptor alpha 4 subunit (GLRA4),
           complete sequence
          Length = 39796

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 548 ggtggccatggtgagcacggtggtg 572
           ||||| |||||||||||||||||||
Sbjct: 833 ggtggtcatggtgagcacggtggtg 857



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>emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chromosome 10 Contains the
             3' end of the gene for apobec-1 complementation factor
             (ACF) (ASP), the gene for a novel protein similar to
             N-acylsphingosine amidohydrolase (non-lysosomal
             ceramidase) 2 (ASAH2), the cathepsin L-like 2 (CTSLL2)
             pseudogene, three novel pseudogenes (KIAA1553), a novel
             gene, a protein geranylgeranyltransferase type I beta
             subunit (PGGT1B) pseudogene and a CpG island, complete
             sequence
          Length = 178899

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   caccttcttctccatggtctg 346
             |||||||||||||||||||||
Sbjct: 47031 caccttcttctccatggtctg 47051



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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     gatgataattaagataaagcg 82
              |||||||||||||||||||||
Sbjct: 319934 gatgataattaagataaagcg 319914



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>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
          Length = 198987

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 530   gtcgttgacggccgccgtggtggccatggtgag 562
             |||| ||||||||||||||||||  ||||||||
Sbjct: 93269 gtcggtgacggccgccgtggtggtgatggtgag 93301



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>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project)
          Length = 100469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 530   gtcgttgacggccgccgtggtggccatggtgag 562
             |||| ||||||||||||||||||  ||||||||
Sbjct: 55259 gtcggtgacggccgccgtggtggtgatggtgag 55291



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>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 159970

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 128    agtgtcgaagttgaagttgtagctg 152
              ||||||||||||||||||| |||||
Sbjct: 118453 agtgtcgaagttgaagttgaagctg 118429



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>gb|AY059825.1| Arabidopsis thaliana putative endo-1, 4-beta-glucanase (At4g39010;
           F19H22.110) mRNA, complete cds
          Length = 1836

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 530 gtcgttgacggccgccgtggtggccatggtgag 562
           |||| ||||||||||||||||||  ||||||||
Sbjct: 70  gtcggtgacggccgccgtggtggtgatggtgag 38



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>emb|BX826717.1|CNS0A45J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB57ZE01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1760

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 530 gtcgttgacggccgccgtggtggccatggtgag 562
           |||| ||||||||||||||||||  ||||||||
Sbjct: 48  gtcggtgacggccgccgtggtggtgatggtgag 16



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>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 128   agtgtcgaagttgaagttgtagctg 152
             ||||||||||||||||||| |||||
Sbjct: 59958 agtgtcgaagttgaagttgaagctg 59934



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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
             sequence
          Length = 318665

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 128   agtgtcgaagttgaagttgtagctg 152
             ||||||||||||||||||| |||||
Sbjct: 86847 agtgtcgaagttgaagttgaagctg 86823



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>emb|AL732498.15| Mouse DNA sequence from clone RP23-323E6 on chromosome 4, complete
              sequence
          Length = 145881

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 499    gcctgagcctcttggtgttct 519
              |||||||||||||||||||||
Sbjct: 100936 gcctgagcctcttggtgttct 100956



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>ref|XM_420183.1| PREDICTED: Gallus gallus similar to Alpha-galactosidase A precursor
            (Melibiase) (Alpha-D-galactoside galactohydrolase)
            (Alpha-D-galactosidase A) (Agalsidase alfa) (LOC422188),
            mRNA
          Length = 3972

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 549  gtggccatggtgagcacggtggtg 572
            |||| |||||||||||||||||||
Sbjct: 1490 gtggtcatggtgagcacggtggtg 1467



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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     cgcgccgaggccgagcttgg 411
               ||||||||||||||||||||
Sbjct: 1377067 cgcgccgaggccgagcttgg 1377048



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>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    gatctgcgcgccgaggccga 405
              ||||||||||||||||||||
Sbjct: 124379 gatctgcgcgccgaggccga 124360



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>ref|XM_799551.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506215.19) partial mRNA
          Length = 4810

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 534  ttgacggccgccgtggtggc 553
            ||||||||||||||||||||
Sbjct: 1190 ttgacggccgccgtggtggc 1171



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>ref|XM_808666.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511285.4) partial mRNA
          Length = 1905

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 534  ttgacggccgccgtggtggc 553
            ||||||||||||||||||||
Sbjct: 1190 ttgacggccgccgtggtggc 1171



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>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 267509

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 472   tgctcatctcctcctcctcgtaca 495
             |||| |||||||||||||||||||
Sbjct: 89350 tgcttatctcctcctcctcgtaca 89373



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>emb|BX323577.16| Zebrafish DNA sequence from clone CH211-277N6 in linkage group 24,
           complete sequence
          Length = 55628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 599 gtagctgatgctgtggatct 618
           ||||||||||||||||||||
Sbjct: 946 gtagctgatgctgtggatct 965



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>emb|BX323037.10| Zebrafish DNA sequence from clone DKEYP-8B6 in linkage group 24, complete
              sequence
          Length = 173818

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 599    gtagctgatgctgtggatct 618
              ||||||||||||||||||||
Sbjct: 172756 gtagctgatgctgtggatct 172775



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 250      tgctcctggtcgcgatggccatga 273
                ||||||||| ||||||||||||||
Sbjct: 20701156 tgctcctggccgcgatggccatga 20701133



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 471      gtgctcatctcctcctcctc 490
                ||||||||||||||||||||
Sbjct: 27980990 gtgctcatctcctcctcctc 27981009



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>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence
          Length = 166892

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 406   gcttggggaaccctgccctaatgg 429
             ||||||||| ||||||||||||||
Sbjct: 34316 gcttggggacccctgccctaatgg 34339



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>gb|AF373806.1| Sinorhizobium meliloti GTP cyclohydrolase/3,4-dihydroxy-2-butanone
            4-phosphate synthase (ribA) gene, complete cds
          Length = 1426

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  gatctgcgcgccgaggccga 405
            ||||||||||||||||||||
Sbjct: 1098 gatctgcgcgccgaggccga 1079



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>ref|XM_218601.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           FLJ23311 (predicted) (LOC308607), mRNA
          Length = 3460

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ggtgctcctggtcgcgatgg 267
           ||||||||||||||||||||
Sbjct: 264 ggtgctcctggtcgcgatgg 283



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 386     gatctgcgcgccgaggccga 405
               ||||||||||||||||||||
Sbjct: 6166149 gatctgcgcgccgaggccga 6166130



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>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_A08
          Length = 119304

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   gtgctcatctcctcctcctc 490
             ||||||||||||||||||||
Sbjct: 24652 gtgctcatctcctcctcctc 24671



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>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0427B07
          Length = 172058

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 250    tgctcctggtcgcgatggccatga 273
              ||||||||| ||||||||||||||
Sbjct: 123563 tgctcctggccgcgatggccatga 123540



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>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1123_G04
          Length = 124666

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 471    gtgctcatctcctcctcctc 490
              ||||||||||||||||||||
Sbjct: 108442 gtgctcatctcctcctcctc 108461



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>ref|XM_317857.2| Anopheles gambiae str. PEST ENSANGP00000014192
           (ENSANGG00000011703), partial mRNA
          Length = 1299

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 473 gctcatctcctcctcctcgt 492
           ||||||||||||||||||||
Sbjct: 864 gctcatctcctcctcctcgt 845



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>ref|XM_310816.2| Anopheles gambiae str. PEST ENSANGP00000008011 (ENSANGG00000006038),
            partial mRNA
          Length = 3390

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 586  cctcgtcgagcctgtagctgatgc 609
            ||||||||||| ||||||||||||
Sbjct: 1852 cctcgtcgagcgtgtagctgatgc 1829



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>ref|XM_309208.2| Anopheles gambiae str. PEST ENSANGP00000005397 (ENSANGG00000004156),
            partial mRNA
          Length = 7809

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  agttgtagctgttgatgccg 161
            ||||||||||||||||||||
Sbjct: 2962 agttgtagctgttgatgccg 2943



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>dbj|AK072932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144J15, full
           insert sequence
          Length = 842

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 250 tgctcctggtcgcgatggccatga 273
           ||||||||| ||||||||||||||
Sbjct: 591 tgctcctggccgcgatggccatga 614



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>dbj|AK070960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B22, full
           insert sequence
          Length = 1485

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 471 gtgctcatctcctcctcctc 490
           ||||||||||||||||||||
Sbjct: 216 gtgctcatctcctcctcctc 235



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 430     tggaattgtagccgagcttgagct 453
               |||||||| |||||||||||||||
Sbjct: 4568087 tggaattgaagccgagcttgagct 4568064



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>gb|AF006190.1|AF006190 Heliothis virescens GABA-gated chloride channel isoform a1 mRNA,
           partial cds
          Length = 669

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 549 gtggccatggtgagcacggtggtg 572
           |||| |||||||||||||||||||
Sbjct: 498 gtggtcatggtgagcacggtggtg 475


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,297,309
Number of Sequences: 3902068
Number of extensions: 5297309
Number of successful extensions: 105229
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104688
Number of HSP's gapped (non-prelim): 541
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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