ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1j15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465531.1| Oryza sativa (japonica cultivar-group), mRNA 137 4e-29
2ref|XM_507481.1| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
3ref|XM_507480.1| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
4ref|XM_507479.1| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
5ref|XM_507478.1| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
6ref|XM_507477.1| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
7ref|XM_507476.1| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
8ref|XM_506800.2| PREDICTED Oryza sativa (japonica cultivar-group... 137 4e-29
9dbj|AB112061.1| Oryza sativa (indica cultivar-group) OsCTP gene,... 137 4e-29
10dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
11dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
12dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
13dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
14dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
15dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
16dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
17dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
19dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
20gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 42 1.6
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.6
22emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chr... 42 1.6
23ref|NM_191437.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
24ref|XM_415711.1| PREDICTED: Gallus gallus similar to huntingtin ... 40 6.4
25gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome... 40 6.4
26gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosom... 40 6.4
27emb|AL033510.1|CEY40H7A Caenorhabditis elegans YAC Y40H7A, compl... 40 6.4
28ref|XM_504397.1| Yarrowia lipolytica CLIB122, YALI0E25784g predi... 40 6.4
29gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, c... 40 6.4
30gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, co... 40 6.4
31dbj|AK122911.1| Homo sapiens cDNA FLJ16588 fis, clone TESTI40010... 40 6.4
32gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand ... 40 6.4
33ref|NM_070429.1| Caenorhabditis elegans Y40H7A.3 (Y40H7A.3) mRNA... 40 6.4
34ref|NM_070428.1| Caenorhabditis elegans Y40H7A.2 (Y40H7A.2) mRNA... 40 6.4
35emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chr... 40 6.4
36gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Canc... 40 6.4
37dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 6.4
38emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, com... 40 6.4
39gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, co... 40 6.4
40emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.4 
>ref|XM_465531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1103

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 610
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>ref|XM_507481.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1112

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 615
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>ref|XM_507480.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1110

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 610
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>ref|XM_507479.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1110

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 610
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>ref|XM_507478.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1115

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 615
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>ref|XM_507477.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1116

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 724 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 665

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 664 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 616
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>ref|XM_507476.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1114

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 720 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 661

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 660 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 612
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>ref|XM_506800.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1130

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 725 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 666

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 665 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 617
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>dbj|AB112061.1| Oryza sativa (indica cultivar-group) OsCTP gene, complete cds
          Length = 741

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 316 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 257

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 256 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 208
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>dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G07, full
           insert sequence
          Length = 1110

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 610
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>dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C03, full
           insert sequence
          Length = 1115

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 615
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>dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F05, full
           insert sequence
          Length = 1110

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 610
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>dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G09, full
           insert sequence
          Length = 1114

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 720 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 661

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 660 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 612
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>dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B07, full
           insert sequence
          Length = 1112

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 723 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 664

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 663 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 615
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>dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E10, full
           insert sequence
          Length = 1114

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 722 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 663

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 662 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 614
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>dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G08, full
           insert sequence
          Length = 1103

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 718 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 659

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 658 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 610
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>dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085D08, full
           insert sequence
          Length = 1130

 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcttcatggcttatattggacagtgccttctccattgagaacaggtagtccctattatat 422
           |||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||  
Sbjct: 725 tcttcatggcatatgttggacaatgccttctccattgagaacaggtaatccctgttattc 666

                                                            
Query: 423 ccattagggccactggctgtagcaatttgccttgccatatcctccaaag 471
           ||||| |||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 665 ccattggggccattggctgtagcaatttgccttgccatgtcctccaaag 617
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 378      ttggacagtgccttctccattgagaacaggtagtccctattatatccattagggccactg 437
                ||||||| |||||||||||||||||||||||| ||||| ||||  ||||| |||||| ||
Sbjct: 15776747 ttggacaatgccttctccattgagaacaggtaatccctgttattcccattggggccattg 15776806

                                 
Query: 438      gctgtagcaatttgcct 454
                |||||||||||||||||
Sbjct: 15776807 gctgtagcaatttgcct 15776823
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>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1342_D02
          Length = 125460

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 378   ttggacagtgccttctccattgagaacaggtagtccctattatatccattagggccactg 437
             ||||||| |||||||||||||||||||||||| ||||| ||||  ||||| |||||| ||
Sbjct: 34687 ttggacaatgccttctccattgagaacaggtaatccctgttattcccattggggccattg 34746

                              
Query: 438   gctgtagcaatttgcct 454
             |||||||||||||||||
Sbjct: 34747 gctgtagcaatttgcct 34763
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 383   cagtgccttctccattgagaa 403
             |||||||||||||||||||||
Sbjct: 85782 cagtgccttctccattgagaa 85802
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 283     cgtcggagccggtaaccttcttctc 307
               ||||||||||||| |||||||||||
Sbjct: 1270477 cgtcggagccggtcaccttcttctc 1270453



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     cgacctgcccagcaccttcc 330
               ||||||||||||||||||||
Sbjct: 1530479 cgacctgcccagcaccttcc 1530498
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>emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chromosome 11, complete
             sequence
          Length = 76047

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 383   cagtgccttctccattgagaa 403
             |||||||||||||||||||||
Sbjct: 28524 cagtgccttctccattgagaa 28544
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>ref|NM_191437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 cctcacctcatccgcaagca 348
           ||||||||||||||||||||
Sbjct: 166 cctcacctcatccgcaagca 185
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>ref|XM_415711.1| PREDICTED: Gallus gallus similar to huntingtin interacting protein
           1 (LOC417463), mRNA
          Length = 7071

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 gcccagcaccttcctcacct 336
           ||||||||||||||||||||
Sbjct: 721 gcccagcaccttcctcacct 702
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>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence
          Length = 245088

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    tctcaggctttcgcattagcactc 37
             |||||||||||| |||||||||||
Sbjct: 22520 tctcaggctttcccattagcactc 22497
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>gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosome 9, complete sequence
          Length = 185810

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    tctcaggctttcgcattagcactc 37
             |||||||||||| |||||||||||
Sbjct: 73038 tctcaggctttcccattagcactc 73061
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>emb|AL033510.1|CEY40H7A Caenorhabditis elegans YAC Y40H7A, complete sequence
          Length = 86086

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 440   tgtagcaatttgccttgccatatc 463
             ||||||| ||||||||||||||||
Sbjct: 21868 tgtagcattttgccttgccatatc 21891



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 440   tgtagcaatttgccttgccatatc 463
             ||||||| ||||||||||||||||
Sbjct: 17559 tgtagcattttgccttgccatatc 17536
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>ref|XM_504397.1| Yarrowia lipolytica CLIB122, YALI0E25784g predicted mRNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 448 tttgccttgccatatcctccaaag 471
           ||||||||| ||||||||||||||
Sbjct: 665 tttgccttgtcatatcctccaaag 642
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>gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, complete sequence
          Length = 171265

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   agagatgtgcacagctggag 264
             ||||||||||||||||||||
Sbjct: 39723 agagatgtgcacagctggag 39742
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>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence
          Length = 176485

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   agagatgtgcacagctggag 264
             ||||||||||||||||||||
Sbjct: 37857 agagatgtgcacagctggag 37838
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>dbj|AK122911.1| Homo sapiens cDNA FLJ16588 fis, clone TESTI4001036, highly  similar
            to Dihydropyridine-sensitive L-type, calcium channel
            beta-3 subunit
          Length = 4029

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  cctgcccagcaccttcctca 333
            ||||||||||||||||||||
Sbjct: 1071 cctgcccagcaccttcctca 1052
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>gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand 1, SCYA4, chemokine
             K203, and chemokine ah294 genes, complete cds
          Length = 112034

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   gcccagcaccttcctcacct 336
             ||||||||||||||||||||
Sbjct: 14416 gcccagcaccttcctcacct 14435
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>ref|NM_070429.1| Caenorhabditis elegans Y40H7A.3 (Y40H7A.3) mRNA, complete cds
          Length = 765

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 440 tgtagcaatttgccttgccatatc 463
           ||||||| ||||||||||||||||
Sbjct: 393 tgtagcattttgccttgccatatc 370
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>ref|NM_070428.1| Caenorhabditis elegans Y40H7A.2 (Y40H7A.2) mRNA, complete cds
          Length = 846

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 440 tgtagcaatttgccttgccatatc 463
           ||||||| ||||||||||||||||
Sbjct: 474 tgtagcattttgccttgccatatc 451
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>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete
             sequence
          Length = 210141

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gtcagaggaaaatgccatct 176
             ||||||||||||||||||||
Sbjct: 32569 gtcagaggaaaatgccatct 32588
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>gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144383

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   cctgcccagcaccttcctca 333
             ||||||||||||||||||||
Sbjct: 72530 cctgcccagcaccttcctca 72549
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    ccactggctgtagcaatttg 451
              ||||||||||||||||||||
Sbjct: 770330 ccactggctgtagcaatttg 770349
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>emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, complete sequence
          Length = 120606

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 56    ccacaatagttgccaaagnaaaa 78
             |||||||||||||||||| ||||
Sbjct: 33549 ccacaatagttgccaaagtaaaa 33527
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>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   tccagccatgccgctcttct 206
             ||||||||||||||||||||
Sbjct: 89307 tccagccatgccgctcttct 89326
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 448     tttgccttgccatatcctccaaag 471
               ||||||||| ||||||||||||||
Sbjct: 3060218 tttgccttgtcatatcctccaaag 3060195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,463,913
Number of Sequences: 3902068
Number of extensions: 3463913
Number of successful extensions: 90268
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90137
Number of HSP's gapped (non-prelim): 131
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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