>PDXS_METMA (Q8PUA5) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-)|
          Length = 301

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -2

Query: 346 GDIXGKAGRCREEVXLGSRHHAAEFDFSLEVITRRAGTMLGFCSGNLALTCSALLM 179
           G+I   AG+ +EE+ + +R   A  +  +E    +   ++ F +G +A    A LM
Sbjct: 176 GEIRALAGKTKEELIMVAREIEAPIELVVETAKMQRLPVVNFAAGGVATPADAALM 231

>PDXS_METAC (Q8TQH6) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-)|
          Length = 301

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -2

Query: 346 GDIXGKAGRCREEVXLGSRHHAAEFDFSLEVITRRAGTMLGFCSGNLALTCSALLM 179
           G+I   AG+ +EE+ + +R   A  +  +E    +   ++ F +G +A    A LM
Sbjct: 176 GEIRALAGKTKEELIMVAREIEAPIELVVETAKMQRLPVVNFAAGGVATPADAALM 231

>RGF3_SCHPO (Q9Y7U5) Rho1 guanine nucleotide exchange factor 3|
          Length = 1275

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +3

Query: 183 NNAEHVRARXPEQKPNMVPARRVITSRLKSNSAA*CLDPSXTSSRHRPALPXISPILYYT 362
           NN+ H  +  P Q P  + +RRV +  ++S+       PS T+ R  P  P  S    YT
Sbjct: 65  NNSPHRFSYSPPQHPASINSRRVASYTVQSS-------PSRTTYRQLPNEPQNSAA--YT 115

Query: 363 ALLPLPMKLF 392
                P  LF
Sbjct: 116 TYSSFPNALF 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,283,203
Number of Sequences: 219361
Number of extensions: 985836
Number of successful extensions: 1912
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)