Clone Name | rbasd1i24 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009346.1| Triticum aestivum clone wlm4.pk0022.h2:fis, full insert mRNA sequence Length = 2433 Score = 987 bits (498), Expect = 0.0 Identities = 657/705 (93%), Gaps = 19/705 (2%) Strand = Plus / Minus Query: 3 gtatgtgtccacaccacgnaacaattaaccatgtacatcaacgtcagtgca--aagnaac 60 |||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 2348 gtatgtgtccactccacg-aacaattaaccatgtacatcaacgtcagtgcaccaaagaac 2290 Query: 61 gaaaa-ctaccat-gtttccccttatcaggatcattaaattttctgacgccgactaagta 118 ||||| |||||| ||||||| | || ||||||||| |||||||||||||||||||| Sbjct: 2289 gaaaaactaccaacgtttcccttgatgaggatcatttaattttctgacgccgactaatct 2230 Query: 119 acctctgaatcatctaacgaccaaaatgtacagggttctctctatataggaggcagc--- 175 |||||||||| ||||||||||||||||||| |||||||| |||||||||||| Sbjct: 2229 --ctctgaatcacctaacgaccaaaatgtacaaggttctct----ataggaggcagcaca 2176 Query: 176 -----tctaggcattctgcaccgtcatgatggcgagggcctctcttgcctgcccgaggat 230 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2175 ctggctctaggcattctgcaccgtcatgatggcgagggcctctcttgcctgccccaggat 2116 Query: 231 gttgaacaccgtcgcggcgatgtgcgacggcgtcagcccggcctccgccagctgatcggc 290 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 2115 gttgaacaccgtcgcggcgatgtgcgacggcgtcagcccggcttccaccagctgatcggc 2056 Query: 291 gggcgatccatggtcgatgtacttgtcgggaagcaccaccggccgccacttaagtttgcc 350 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2055 cggtgatccatggtcgatgtacttgtcgggaagcaccaccggccgccacttaagtttgcc 1996 Query: 351 gtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaagccgccgatgga 410 ||| |||||||| || || |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1995 gtccagaaggccatccagggccatgaactgagccacgtgtgaaccgaagccgccgatgga 1936 Query: 411 gccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcctgatgagggcgtg 470 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1935 gccttcctcgacggtgatgatcacctcgtgggacttggcgaggctcctgatgagggcgtg 1876 Query: 471 gtccaagggcttgcagaacctggcgtcggcgacggtgaccctgaggccgtgctgcgccac 530 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1875 gtccaacggcttgcagaacctggcgtcggcgacggtgaccctgaggccgtggtgcgccac 1816 Query: 531 gatggacgaggcggccatgcagtactgcaccgccgacccgtaccccagcagcgccaccct 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1815 gatggacgaggcggccatgcagtactgcaccgccgacccgtaccccagcagcgccaccct 1756 Query: 591 ctcgccctcgatcatgatcctgcctttgccgacctcgatggcagtgcctttgtagttttc 650 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1755 ctcgccctcgatcatgatcctgcctttgccgacctcgatggcggtgcctttgtagttttc 1696 Query: 651 cggcaacgggacgccgatgccgttgcctctcggatagcggaagca 695 ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1695 cggcaacgggacgccgatgccgttgcccctcggatagcggaagca 1651
>gb|AY110050.1| Zea mays CL392_1 mRNA sequence Length = 2624 Score = 557 bits (281), Expect = e-155 Identities = 428/477 (89%) Strand = Plus / Minus Query: 219 ctgcccgaggatgttgaacaccgtcgcggcgatgtgcgacggcgtcagcccggcctccgc 278 |||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||| || Sbjct: 2432 ctgccccaggatgttgaacaccgacgcggcgatgtgtgacggcgtcagcccagcctcggc 2373 Query: 279 cagctgatcggcgggcgatccatggtcgatgtacttgtcgggaagcaccaccggccgcca 338 |||||||||||| ||||||||||||||||||||| |||| |||||||||| ||| ||||| Sbjct: 2372 cagctgatcggccggcgatccatggtcgatgtacctgtcaggaagcaccagcggtcgcca 2313 Query: 339 cttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaa 398 ||| ||||||||||||||||||||||| || ||||||||||| || |||||||||||||| Sbjct: 2312 cttgagtttgccgtcgagaaggccgtccagggccatgaactgggcgacgtgcgagccgaa 2253 Query: 399 gccgccgatggagccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcct 458 |||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| Sbjct: 2252 cccgccgatggagccttcctccacggtgatgagcacctcgtgggacttggccaggctcct 2193 Query: 459 gatgagggcgtggtccaagggcttgcagaacctggcgtcggcgacggtgaccctgaggcc 518 ||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| Sbjct: 2192 gatcagggcgtggtccagcggcttgcagaacctcgcgtcggcgacggtgaccttgaggcc 2133 Query: 519 gtgctgcgccacgatggacgaggcggccatgcagtactgcaccgccgacccgtaccccag 578 ||| || ||| | ||||| ||| | || |||||||||||| ||||||||||||||||| Sbjct: 2132 gtggcgctgcaccagggacgcggcagtcaggcagtactgcactgccgacccgtaccccag 2073 Query: 579 cagcgccaccctctcgccctcgatcatgatcctgcctttgccgacctcgatggcagtgcc 638 ||||||||||| |||||||| | || ||||||||||||||||||||||| || |||||| Sbjct: 2072 cagcgccacccggtcgccctcaagcaggatcctgcctttgccgacctcgaggggagtgcc 2013 Query: 639 tttgtagttttccggcaacgggacgccgatgccgttgcctctcggatagcggaagca 695 ||||||||| ||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 2012 tttgtagttgggcggcaacgggacgccaacgccgttgcctctcgggtagcggaagca 1956
>gb|AY946271.1| Zea mays 1-deoxy-D-xylulose 5-phosphate synthase 1 (dxs1) mRNA, partial cds Length = 1573 Score = 549 bits (277), Expect = e-153 Identities = 427/477 (89%) Strand = Plus / Minus Query: 219 ctgcccgaggatgttgaacaccgtcgcggcgatgtgcgacggcgtcagcccggcctccgc 278 |||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||| || Sbjct: 1404 ctgccccaggatgttgaacaccgacgcggcgatgtgtgacggcgtcagcccagcctcggc 1345 Query: 279 cagctgatcggcgggcgatccatggtcgatgtacttgtcgggaagcaccaccggccgcca 338 |||||||||||| ||||||||||||||||||||| |||| |||||||||| ||| ||||| Sbjct: 1344 cagctgatcggccggcgatccatggtcgatgtacctgtcaggaagcaccagcggtcgcca 1285 Query: 339 cttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaa 398 ||| ||||||||||||||||||||||| || ||||||||||| || | |||||||||||| Sbjct: 1284 cttgagtttgccgtcgagaaggccgtccagggccatgaactgggcgatgtgcgagccgaa 1225 Query: 399 gccgccgatggagccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcct 458 |||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| Sbjct: 1224 cccgccgatggagccttcctccacggtgatgagcacctcgtgggacttggccaggctcct 1165 Query: 459 gatgagggcgtggtccaagggcttgcagaacctggcgtcggcgacggtgaccctgaggcc 518 ||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| Sbjct: 1164 gatcagggcgtggtccagcggcttgcagaacctcgcgtcggcgacggtgaccttgaggcc 1105 Query: 519 gtgctgcgccacgatggacgaggcggccatgcagtactgcaccgccgacccgtaccccag 578 ||| || ||| | ||||| ||| | || |||||||||||| ||||||||||||||||| Sbjct: 1104 gtggcgctgcaccagggacgcggcagtcaggcagtactgcactgccgacccgtaccccag 1045 Query: 579 cagcgccaccctctcgccctcgatcatgatcctgcctttgccgacctcgatggcagtgcc 638 ||||||||||| |||||||| | || ||||||||||||||||||||||| || |||||| Sbjct: 1044 cagcgccacccggtcgccctcaagcaggatcctgcctttgccgacctcgaggggagtgcc 985 Query: 639 tttgtagttttccggcaacgggacgccgatgccgttgcctctcggatagcggaagca 695 ||||||||| ||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 984 tttgtagttgggcggcaacgggacgccaacgccgttgcctctcgggtagcggaagca 928
>ref|XM_475227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2658 Score = 468 bits (236), Expect = e-128 Identities = 440/508 (86%) Strand = Plus / Minus Query: 188 gcaccgtcatgatggcgagggcctctcttgcctgcccgaggatgttgaacaccgtcgcgg 247 ||||||||||||||||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 2647 gcaccgtcatgatggcgagcgcctccctcgcctggcccagcacgttgaacaccgtcgccg 2588 Query: 248 cgatgtgcgacggcgtcagcccggcctccgccagctgatcggcgggcgatccatggtcga 307 |||||||||||||||||||||| ||||||||||||||||| || || || || ||||||| Sbjct: 2587 cgatgtgcgacggcgtcagccctgcctccgccagctgatccgccggtgacccgtggtcga 2528 Query: 308 tgtacttgtcgggaagcaccaccggccgccacttaagtttgccgtcgagaaggccgtcga 367 ||||| ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| Sbjct: 2527 tgtacctgtcgggtagcaccagcggccgccacttgagtttgccgtcgaggaggccgtcga 2468 Query: 368 gagccatgaactgagccacgtgcgagccgaagccgccgatggagccttcctcgacggtga 427 | ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 2467 gggccatgaactgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtga 2408 Query: 428 tgatcacctcgtgggatttggcgaggctcctgatgagggcgtggtccaagggcttgcaga 487 || |||||||||||| |||| || ||||||||||| | ||||||| |||||||||| Sbjct: 2407 ggagcacctcgtgggagctggccagcctcctgatgagcgtttggtccagcggcttgcaga 2348 Query: 488 acctggcgtcggcgacggtgaccctgaggccgtgctgcgccacgatggacgaggcggcca 547 |||| |||||||||||||| ||| ||||||||||| || |||| | |||| ||||| | Sbjct: 2347 acctcgcgtcggcgacggtcaccttgaggccgtgccgctccaccagcgacgctgcggcga 2288 Query: 548 tgcagtactgcaccgccgacccgtaccccagcagcgccaccctctcgccctcgatcatga 607 |||||||||||||||||| |||||||| ||||||||||||||||||||||| | || | Sbjct: 2287 ggcagtactgcaccgccgaaccgtacccaagcagcgccaccctctcgccctccagcagta 2228 Query: 608 tcctgcctttgccgacctcgatggcagtgcctttgtagttttccggcaacgggacgccga 667 ||| |||||||| ||||||| || | |||||||||||| || | ||||||||||| Sbjct: 2227 ccctccctttgcctacctcgaggggaacgcctttgtagttgggtggtagcgggacgccga 2168 Query: 668 tgccgttgcctctcggatagcggaagca 695 ||||||||||||| || ||||||||||| Sbjct: 2167 tgccgttgcctcttgggtagcggaagca 2140
>dbj|AK104851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A10, full insert sequence Length = 2522 Score = 468 bits (236), Expect = e-128 Identities = 440/508 (86%) Strand = Plus / Minus Query: 188 gcaccgtcatgatggcgagggcctctcttgcctgcccgaggatgttgaacaccgtcgcgg 247 ||||||||||||||||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 2271 gcaccgtcatgatggcgagcgcctccctcgcctggcccagcacgttgaacaccgtcgccg 2212 Query: 248 cgatgtgcgacggcgtcagcccggcctccgccagctgatcggcgggcgatccatggtcga 307 |||||||||||||||||||||| ||||||||||||||||| || || || || ||||||| Sbjct: 2211 cgatgtgcgacggcgtcagccctgcctccgccagctgatccgccggtgacccgtggtcga 2152 Query: 308 tgtacttgtcgggaagcaccaccggccgccacttaagtttgccgtcgagaaggccgtcga 367 ||||| ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| Sbjct: 2151 tgtacctgtcgggtagcaccagcggccgccacttgagtttgccgtcgaggaggccgtcga 2092 Query: 368 gagccatgaactgagccacgtgcgagccgaagccgccgatggagccttcctcgacggtga 427 | ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 2091 gggccatgaactgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtga 2032 Query: 428 tgatcacctcgtgggatttggcgaggctcctgatgagggcgtggtccaagggcttgcaga 487 || |||||||||||| |||| || ||||||||||| | ||||||| |||||||||| Sbjct: 2031 ggagcacctcgtgggagctggccagcctcctgatgagcgtttggtccagcggcttgcaga 1972 Query: 488 acctggcgtcggcgacggtgaccctgaggccgtgctgcgccacgatggacgaggcggcca 547 |||| |||||||||||||| ||| ||||||||||| || |||| | |||| ||||| | Sbjct: 1971 acctcgcgtcggcgacggtcaccttgaggccgtgccgctccaccagcgacgctgcggcga 1912 Query: 548 tgcagtactgcaccgccgacccgtaccccagcagcgccaccctctcgccctcgatcatga 607 |||||||||||||||||| |||||||| ||||||||||||||||||||||| | || | Sbjct: 1911 ggcagtactgcaccgccgaaccgtacccaagcagcgccaccctctcgccctccagcagta 1852 Query: 608 tcctgcctttgccgacctcgatggcagtgcctttgtagttttccggcaacgggacgccga 667 ||| |||||||| ||||||| || | |||||||||||| || | ||||||||||| Sbjct: 1851 ccctccctttgcctacctcgaggggaacgcctttgtagttgggtggtagcgggacgccga 1792 Query: 668 tgccgttgcctctcggatagcggaagca 695 ||||||||||||| || ||||||||||| Sbjct: 1791 tgccgttgcctcttgggtagcggaagca 1764
>dbj|AK064944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P14, full insert sequence Length = 2576 Score = 468 bits (236), Expect = e-128 Identities = 440/508 (86%) Strand = Plus / Minus Query: 188 gcaccgtcatgatggcgagggcctctcttgcctgcccgaggatgttgaacaccgtcgcgg 247 ||||||||||||||||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 2312 gcaccgtcatgatggcgagcgcctccctcgcctggcccagcacgttgaacaccgtcgccg 2253 Query: 248 cgatgtgcgacggcgtcagcccggcctccgccagctgatcggcgggcgatccatggtcga 307 |||||||||||||||||||||| ||||||||||||||||| || || || || ||||||| Sbjct: 2252 cgatgtgcgacggcgtcagccctgcctccgccagctgatccgccggtgacccgtggtcga 2193 Query: 308 tgtacttgtcgggaagcaccaccggccgccacttaagtttgccgtcgagaaggccgtcga 367 ||||| ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| Sbjct: 2192 tgtacctgtcgggtagcaccagcggccgccacttgagtttgccgtcgaggaggccgtcga 2133 Query: 368 gagccatgaactgagccacgtgcgagccgaagccgccgatggagccttcctcgacggtga 427 | ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 2132 gggccatgaactgcgcgacgtgggagccgaacccgccgatggagccttcctcgacggtga 2073 Query: 428 tgatcacctcgtgggatttggcgaggctcctgatgagggcgtggtccaagggcttgcaga 487 || |||||||||||| |||| || ||||||||||| | ||||||| |||||||||| Sbjct: 2072 ggagcacctcgtgggagctggccagcctcctgatgagcgtttggtccagcggcttgcaga 2013 Query: 488 acctggcgtcggcgacggtgaccctgaggccgtgctgcgccacgatggacgaggcggcca 547 |||| |||||||||||||| ||| ||||||||||| || |||| | |||| ||||| | Sbjct: 2012 acctcgcgtcggcgacggtcaccttgaggccgtgccgctccaccagcgacgctgcggcga 1953 Query: 548 tgcagtactgcaccgccgacccgtaccccagcagcgccaccctctcgccctcgatcatga 607 |||||||||||||||||| |||||||| ||||||||||||||||||||||| | || | Sbjct: 1952 ggcagtactgcaccgccgaaccgtacccaagcagcgccaccctctcgccctccagcagta 1893 Query: 608 tcctgcctttgccgacctcgatggcagtgcctttgtagttttccggcaacgggacgccga 667 ||| |||||||| ||||||| || | |||||||||||| || | ||||||||||| Sbjct: 1892 ccctccctttgcctacctcgaggggaacgcctttgtagttgggtggtagcgggacgccga 1833 Query: 668 tgccgttgcctctcggatagcggaagca 695 ||||||||||||| || ||||||||||| Sbjct: 1832 tgccgttgcctcttgggtagcggaagca 1805
>gb|AF024512.1|AF024512 Oryza sativa CLA1 transketolase-like protein (CLA1) mRNA, nuclear gene encoding putative chloroplast protein, partial cds Length = 1785 Score = 321 bits (162), Expect = 2e-84 Identities = 315/366 (86%) Strand = Plus / Minus Query: 330 cggccgccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtg 389 |||||||||||| |||||||||||||| ||||||||||| ||||||||||| || ||||| Sbjct: 1784 cggccgccacttgagtttgccgtcgaggaggccgtcgagggccatgaactgcgcgacgtg 1725 Query: 390 cgagccgaagccgccgatggagccttcctcgacggtgatgatcacctcgtgggatttggc 449 |||||||| |||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 1724 ggagccgaacccgccgatggagccttcctcgacggtgaggagcacctcgtgggagctggc 1665 Query: 450 gaggctcctgatgagggcgtggtccaagggcttgcagaacctggcgtcggcgacggtgac 509 || ||||||||||| | ||||||| |||||||||||||| |||||||||||||| || Sbjct: 1664 cagcctcctgatgagcgtttggtccagcggcttgcagaacctcgcgtcggcgacggtcac 1605 Query: 510 cctgaggccgtgctgcgccacgatggacgaggcggccatgcagtactgcaccgccgaccc 569 | ||||||||||| || |||| | |||| ||||| | |||||||||||||||||| || Sbjct: 1604 cttgaggccgtgccgctccaccagcgacgctgcggcgaggcagtactgcaccgccgaacc 1545 Query: 570 gtaccccagcagcgccaccctctcgccctcgatcatgatcctgcctttgccgacctcgat 629 |||||| ||||||||||||||||||||||| | || | ||| |||||||| ||||||| Sbjct: 1544 gtacccaagcagcgccaccctctcgccctccagcagtaccctccctttgcctacctcgag 1485 Query: 630 ggcagtgcctttgtagttttccggcaacgggacgccgatgccgttgcctctcggatagcg 689 || | |||||||||||| || | |||||||||||||||||||||||| || ||||| Sbjct: 1484 gggaacgcctttgtagttgggtggtagcgggacgccgatgccgttgcctcttgggtagcg 1425 Query: 690 gaagca 695 |||||| Sbjct: 1424 gaagca 1419
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 264 bits (133), Expect = 4e-67 Identities = 226/257 (87%) Strand = Plus / Plus Query: 343 agtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaagccg 402 |||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||| ||| Sbjct: 141542 agtttgccgtcgaggaggccgtcgagggccatgaactgcgcgacgtgggagccgaacccg 141601 Query: 403 ccgatggagccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcctgatg 462 ||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||| Sbjct: 141602 ccgatggagccttcctcgacggtgaggagcacctcgtgggagctggccagcctcctgatg 141661 Query: 463 agggcgtggtccaagggcttgcagaacctggcgtcggcgacggtgaccctgaggccgtgc 522 || | ||||||| |||||||||||||| |||||||||||||| ||| ||||||||||| Sbjct: 141662 agcgtttggtccagcggcttgcagaacctcgcgtcggcgacggtcaccttgaggccgtgc 141721 Query: 523 tgcgccacgatggacgaggcggccatgcagtactgcaccgccgacccgtaccccagcagc 582 || |||| | |||| ||||| | |||||||||||||||||| |||||||| |||||| Sbjct: 141722 cgctccaccagcgacgctgcggcgaggcagtactgcaccgccgaaccgtacccaagcagc 141781 Query: 583 gccaccctctcgccctc 599 ||||||||||||||||| Sbjct: 141782 gccaccctctcgccctc 141798 Score = 168 bits (85), Expect = 2e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 188 gcaccgtcatgatggcgagggcctctcttgcctgcccgaggatgttgaacaccgtcgcgg 247 ||||||||||||||||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 141264 gcaccgtcatgatggcgagcgcctccctcgcctggcccagcacgttgaacaccgtcgccg 141323 Query: 248 cgatgtgcgacggcgtcagcccggcctccgccagctgatcggcgggcgatccatggtcga 307 |||||||||||||||||||||| ||||||||||||||||| || || || || ||||||| Sbjct: 141324 cgatgtgcgacggcgtcagccctgcctccgccagctgatccgccggtgacccgtggtcga 141383 Query: 308 tgtacttgtcgggaagcaccaccggccgccact 340 ||||| ||||||| ||||||| ||||||||||| Sbjct: 141384 tgtacctgtcgggtagcaccagcggccgccact 141416 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 657 cgggacgccgatgccgttgcctctcggatagcggaagca 695 |||||||||||||||||||||||| || ||||||||||| Sbjct: 141957 cgggacgccgatgccgttgcctcttgggtagcggaagca 141995
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 264 bits (133), Expect = 4e-67 Identities = 226/257 (87%) Strand = Plus / Plus Query: 343 agtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaagccg 402 |||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||| ||| Sbjct: 66092 agtttgccgtcgaggaggccgtcgagggccatgaactgcgcgacgtgggagccgaacccg 66151 Query: 403 ccgatggagccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcctgatg 462 ||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||| Sbjct: 66152 ccgatggagccttcctcgacggtgaggagcacctcgtgggagctggccagcctcctgatg 66211 Query: 463 agggcgtggtccaagggcttgcagaacctggcgtcggcgacggtgaccctgaggccgtgc 522 || | ||||||| |||||||||||||| |||||||||||||| ||| ||||||||||| Sbjct: 66212 agcgtttggtccagcggcttgcagaacctcgcgtcggcgacggtcaccttgaggccgtgc 66271 Query: 523 tgcgccacgatggacgaggcggccatgcagtactgcaccgccgacccgtaccccagcagc 582 || |||| | |||| ||||| | |||||||||||||||||| |||||||| |||||| Sbjct: 66272 cgctccaccagcgacgctgcggcgaggcagtactgcaccgccgaaccgtacccaagcagc 66331 Query: 583 gccaccctctcgccctc 599 ||||||||||||||||| Sbjct: 66332 gccaccctctcgccctc 66348 Score = 168 bits (85), Expect = 2e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 188 gcaccgtcatgatggcgagggcctctcttgcctgcccgaggatgttgaacaccgtcgcgg 247 ||||||||||||||||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 65814 gcaccgtcatgatggcgagcgcctccctcgcctggcccagcacgttgaacaccgtcgccg 65873 Query: 248 cgatgtgcgacggcgtcagcccggcctccgccagctgatcggcgggcgatccatggtcga 307 |||||||||||||||||||||| ||||||||||||||||| || || || || ||||||| Sbjct: 65874 cgatgtgcgacggcgtcagccctgcctccgccagctgatccgccggtgacccgtggtcga 65933 Query: 308 tgtacttgtcgggaagcaccaccggccgccact 340 ||||| ||||||| ||||||| ||||||||||| Sbjct: 65934 tgtacctgtcgggtagcaccagcggccgccact 65966 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 657 cgggacgccgatgccgttgcctctcggatagcggaagca 695 |||||||||||||||||||||||| || ||||||||||| Sbjct: 66507 cgggacgccgatgccgttgcctcttgggtagcggaagca 66545
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 264 bits (133), Expect = 4e-67 Identities = 226/257 (87%) Strand = Plus / Plus Query: 343 agtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaagccg 402 |||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||| ||| Sbjct: 19813468 agtttgccgtcgaggaggccgtcgagggccatgaactgcgcgacgtgggagccgaacccg 19813527 Query: 403 ccgatggagccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcctgatg 462 ||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||| Sbjct: 19813528 ccgatggagccttcctcgacggtgaggagcacctcgtgggagctggccagcctcctgatg 19813587 Query: 463 agggcgtggtccaagggcttgcagaacctggcgtcggcgacggtgaccctgaggccgtgc 522 || | ||||||| |||||||||||||| |||||||||||||| ||| ||||||||||| Sbjct: 19813588 agcgtttggtccagcggcttgcagaacctcgcgtcggcgacggtcaccttgaggccgtgc 19813647 Query: 523 tgcgccacgatggacgaggcggccatgcagtactgcaccgccgacccgtaccccagcagc 582 || |||| | |||| ||||| | |||||||||||||||||| |||||||| |||||| Sbjct: 19813648 cgctccaccagcgacgctgcggcgaggcagtactgcaccgccgaaccgtacccaagcagc 19813707 Query: 583 gccaccctctcgccctc 599 ||||||||||||||||| Sbjct: 19813708 gccaccctctcgccctc 19813724 Score = 168 bits (85), Expect = 2e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 188 gcaccgtcatgatggcgagggcctctcttgcctgcccgaggatgttgaacaccgtcgcgg 247 ||||||||||||||||||| ||||| || ||||| || || | ||||||||||||||| | Sbjct: 19813190 gcaccgtcatgatggcgagcgcctccctcgcctggcccagcacgttgaacaccgtcgccg 19813249 Query: 248 cgatgtgcgacggcgtcagcccggcctccgccagctgatcggcgggcgatccatggtcga 307 |||||||||||||||||||||| ||||||||||||||||| || || || || ||||||| Sbjct: 19813250 cgatgtgcgacggcgtcagccctgcctccgccagctgatccgccggtgacccgtggtcga 19813309 Query: 308 tgtacttgtcgggaagcaccaccggccgccact 340 ||||| ||||||| ||||||| ||||||||||| Sbjct: 19813310 tgtacctgtcgggtagcaccagcggccgccact 19813342 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 657 cgggacgccgatgccgttgcctctcggatagcggaagca 695 |||||||||||||||||||||||| || ||||||||||| Sbjct: 19813883 cgggacgccgatgccgttgcctcttgggtagcggaagca 19813921
>gb|AY583783.1| Elaeis guineensis chloroplast 1-deoxy-D-xylulose-5-phosphate synthase (dxs) mRNA, complete cds Length = 2301 Score = 93.7 bits (47), Expect = 7e-16 Identities = 167/207 (80%) Strand = Plus / Minus Query: 282 ctgatcggcgggcgatccatggtcgatgtacttgtcgggaagcaccaccggccgccactt 341 ||||||||| || || |||||||||||||| |||| ||||| |||| || | |||||| Sbjct: 2076 ctgatcggctggtgacccatggtcgatgtatctgtccggaagaaccaatggtctccactt 2017 Query: 342 aagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagccgaagcc 401 |||||||| || || || || || || |||||||||||||| || || ||||| || || Sbjct: 2016 cagtttgccatcaaggagcccatcaagtgccatgaactgagcaacatgagagccaaatcc 1957 Query: 402 gccgatggagccttcctcgacggtgatgatcacctcgtgggatttggcgaggctcctgat 461 |||||||||||||| ||||| ||||| | || ||| || ||| | || ||||||| || Sbjct: 1956 cccgatggagccttcttcgaccgtgataagcagctcatgtgatctagctaggctccgaat 1897 Query: 462 gagggcgtggtccaagggcttgcagaa 488 |||||| || ||||| ||||||||||| Sbjct: 1896 gagggcatgatccaatggcttgcagaa 1870 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 574 cccagcagcgccaccctctcgccctcgatcatgatcctgcctttgccgacctc 626 ||||| || ||||||||||| ||||| |||| ||||| |||||||| ||||| Sbjct: 1784 cccagaagtgccaccctctcaccctcaatcagtatccttcctttgcccacctc 1732
>gb|AY254391.2| Andrographis paniculata 1-deoxy-D-xylulose-5-phosphate synthase (DXS2) mRNA, partial cds Length = 1985 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 301 tggtcgatgtacttgtcgggaagcaccaccggccgccacttaagtttgccgtcgagaagg 360 ||||||||||| |||| || ||||||| |||||||||||| || ||||||||||||| Sbjct: 1631 tggtcgatgtatctgtccggcagcaccatcggccgccacttgagcttgccgtcgagaaaa 1572 Query: 361 ccgtcgagagccatgaactgagccacgtgcgagccgaagccgccgatggagccttcctcg 420 |||| | | | |||||| ||||||||||||| ||| || |||| ||| |||||||| Sbjct: 1571 ccgttcaacgataagaactgcgccacgtgcgagctgaaccccccgacggaaccttcctca 1512 Query: 421 acggt 425 ||||| Sbjct: 1511 acggt 1507
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 393 gccgaagccgccgatggagccttcctcgacggtgatgatcacctcgtgg 441 |||||||||||||| ||||||||||||||||||||| | || ||||||| Sbjct: 962376 gccgaagccgccgacggagccttcctcgacggtgatcagcatctcgtgg 962424
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 375 gaactgagccacgtgcgagccgaagccgccgatggagccttcctcga 421 |||||| || |||||||||||||||||||||| ||||||||||||| Sbjct: 2897081 gaactgcgcgacgtgcgagccgaagccgccgaccgagccttcctcga 2897127
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 393 gccgaagccgccgatggagccttcctcgacggtgat 428 ||||||||||||||| ||||||||||||| |||||| Sbjct: 4772959 gccgaagccgccgatcgagccttcctcgatggtgat 4772924
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 393 gccgaagccgccgatggagccttcctcgacggtgat 428 ||||||||||||||| ||||||||||||| |||||| Sbjct: 5050472 gccgaagccgccgatcgagccttcctcgatggtgat 5050437 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 gtcgcggcgatgtgcgacggcgtc 264 |||||||||||| ||||||||||| Sbjct: 4391404 gtcgcggcgatgggcgacggcgtc 4391427
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 391 gagccgaagccgccgatggagccttcctcga 421 ||||||||||||||||| ||||||||||||| Sbjct: 858727 gagccgaagccgccgatcgagccttcctcga 858757
>gb|AY254390.1| Andrographis paniculata 1-deoxy-D-xylulose-5-phosphate synthase (DXS1) mRNA, complete cds Length = 2512 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 295 gatccatggtcgatgtacttgtcgggaagcaccaccggccgccacttaagtttgccgtcg 354 ||||||||||||||||| ||| ||||| || | |||| |||||| | ||||||||| Sbjct: 2321 gatccatggtcgatgtatcggtcaggaagaacaagtggcctccactttaatttgccgtca 2262 Query: 355 agaaggccgtcgagagccatgaactgagccacgtg 389 || || || ||||| |||||||||||||| ||||| Sbjct: 2261 aggagcccatcgagggccatgaactgagctacgtg 2227
>emb|AJ291721.1|NTA291721 Nicotiana tabacum partial mRNA for 1-deoxy-D-xylulose 5-phosphate synthase (dxs gene) Length = 882 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 370 gccatgaactgagccacgtgcgagccgaagccgccgatggagccttcctcgacggtgatg 429 ||||| |||||||| || || || ||||| || || || || ||||| || || ||||| Sbjct: 782 gccataaactgagcaacatgagacccgaaacctccaattgatccttcttcaacagtgatt 723 Query: 430 atcacctcgtgggatttggcgaggctcctgatgagggcgtggtcca 475 | ||| ||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 722 agcacttcgtgtgattttgcgaggctccttatgagggcatggtcca 677 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 607 atcctgcctttgccgacctcgatggcagtgcctttgt 643 ||||||||||| |||||||| | || ||||||||||| Sbjct: 545 atcctgcctttaccgacctcaaggggagtgcctttgt 509
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 385 acgtgcgagccgaagccgccgatggagccttcctcga 421 ||||| |||||||| |||||||| ||||||||||||| Sbjct: 712078 acgtgggagccgaatccgccgatcgagccttcctcga 712114
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 393 gccgaagccgccgatggagccttcctcga 421 ||||||||||||||| ||||||||||||| Sbjct: 1249772 gccgaagccgccgatcgagccttcctcga 1249800 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 gtcgcggcgatgtgcgacggcgtc 264 |||||||||||| ||||||||||| Sbjct: 1587726 gtcgcggcgatgggcgacggcgtc 1587703
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 393 gccgaagccgccgatggagccttcctcgacggtgatgatcacctcgtgg 441 ||||||||||||||| | ||||||||||||| ||| | |||||||||| Sbjct: 59838 gccgaagccgccgatcgcgccttcctcgacgacgatcagcacctcgtgg 59790 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 397 aagccgccgatggagccttcctcgacggtgatgatcacctcgtgg 441 ||||||||||| | ||||||||||||| ||| | |||||||||| Sbjct: 3048732 aagccgccgatcgcgccttcctcgacgacgatcagcacctcgtgg 3048688
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 393 gccgaagccgccgatggagccttcctcgacggtgatgatcacctcgtg 440 ||||||||||||||||| ||| ||||||| ||| |||| | ||||||| Sbjct: 2897019 gccgaagccgccgatggcgccctcctcgatggtaatgagcgcctcgtg 2897066
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 gcccgaggatgttgaacaccgt 242 |||||||||||||||||||||| Sbjct: 2609868 gcccgaggatgttgaacaccgt 2609889
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 cgatggagccttcctcgacggtgatg 429 |||||||||||||||||| ||||||| Sbjct: 908966 cgatggagccttcctcgatggtgatg 908991
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 573 ccccagcagcgccaccctctcgccct 598 |||||||||||||||||| ||||||| Sbjct: 4743063 ccccagcagcgccaccctttcgccct 4743038 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 3102239 gagccttcctcgacggtgat 3102220
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 acgtgcgagccgaagccgccgatggagccttcctcgac 422 ||||||||||| || || |||||||| ||||||||||| Sbjct: 916716 acgtgcgagccaaaacctccgatggatccttcctcgac 916753
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 393 gccgaagccgccgatggagccttcctcgacggtgatgatcacctcgtgg 441 |||||||||||| | || ||||||||||| |||||| | | |||||||| Sbjct: 267861 gccgaagccgcccacggcgccttcctcgatggtgatcagcgcctcgtgg 267909 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 cgaggatgttgaacaccgtcgcggcgat 251 ||||||||| ||||||||||||| |||| Sbjct: 1079430 cgaggatgtagaacaccgtcgcgacgat 1079457
>ref|NM_117647.2| Arabidopsis thaliana CLA1 (CLOROPLASTOS ALTERADOS 1) AT4G15560 (CLA1) mRNA, complete cds Length = 2776 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Minus Query: 336 ccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagcc 395 |||||| |||||||| || ||||| || |||||||| | |||||| | ||||||||||| Sbjct: 2327 ccacttgagtttgccatcaagaagaccatcgagagcaagaaactgaacaacgtgcgagcc 2268 Query: 396 gaagccgccgatggagccttc 416 || || || ||||| ||||| Sbjct: 2267 aaaacctccaatggaaccttc 2247
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cggcgatgtgcgacggcgtca 265 ||||||||||||||||||||| Sbjct: 637071 cggcgatgtgcgacggcgtca 637091
>gb|AF107257.1| Homo sapiens chromosome 21q22.1 PAC L12209, complete sequence Length = 139851 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tgtttccccttatcaggatca 92 ||||||||||||||||||||| Sbjct: 73618 tgtttccccttatcaggatca 73638
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cggcgatgtgcgacggcgtca 265 ||||||||||||||||||||| Sbjct: 2550034 cggcgatgtgcgacggcgtca 2550014
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccgccagctgatcggcgggcg 295 ||||||||||||||||||||| Sbjct: 832774 ccgccagctgatcggcgggcg 832754
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cggcgatgtgcgacggcgtca 265 ||||||||||||||||||||| Sbjct: 3762246 cggcgatgtgcgacggcgtca 3762226
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cggcgatgtgcgacggcgtca 265 ||||||||||||||||||||| Sbjct: 2567218 cggcgatgtgcgacggcgtca 2567198
>gb|BC062355.1| Homo sapiens hypothetical gene supported by AK127273, mRNA (cDNA clone IMAGE:4581714) Length = 3520 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 2311 gaaggccgccgagagccatgaactg 2287
>gb|AY034917.1| Arabidopsis thaliana putative DEF (CLA1) protein (At4g15560) mRNA, partial cds Length = 1518 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Minus Query: 336 ccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagcc 395 |||||| |||||||| || ||||| || |||||||| | |||||| | ||||||||||| Sbjct: 1085 ccacttgagtttgccatcaagaagaccatcgagagcaagaaactgaacaacgtgcgagcc 1026 Query: 396 gaagccgccgatggagccttc 416 || || || ||||| ||||| Sbjct: 1025 aaaacctccaatggaaccttc 1005
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccgccagctgatcggcgggcg 295 ||||||||||||||||||||| Sbjct: 146311 ccgccagctgatcggcgggcg 146291
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cggcgatgtgcgacggcgtca 265 ||||||||||||||||||||| Sbjct: 3502615 cggcgatgtgcgacggcgtca 3502595
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccgccagctgatcggcgggcg 295 ||||||||||||||||||||| Sbjct: 165406 ccgccagctgatcggcgggcg 165386
>emb|CR625127.1| full-length cDNA clone CS0DF013YC15 of Fetal brain of Homo sapiens (human) Length = 1182 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 672 gaaggccgccgagagccatgaactg 648
>dbj|AK096776.1| Homo sapiens cDNA FLJ39457 fis, clone PROST2011105 Length = 2329 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 1943 gaaggccgccgagagccatgaactg 1919
>dbj|AK093729.1| Homo sapiens cDNA FLJ36410 fis, clone THYMU2010637 Length = 1937 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 745 gaaggccgccgagagccatgaactg 721
>gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, complete sequence Length = 174133 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 102241 gaaggccgccgagagccatgaactg 102217
>gb|AF428463.1|AF428463 Arabidopsis thaliana AT4g15560/dl3821w mRNA, complete cds Length = 1432 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Minus Query: 336 ccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagcc 395 |||||| |||||||| || ||||| || |||||||| | |||||| | ||||||||||| Sbjct: 1220 ccacttgagtttgccatcaagaagaccatcgagagcaagaaactgaacaacgtgcgagcc 1161 Query: 396 gaagccgccgatggagccttc 416 || || || ||||| ||||| Sbjct: 1160 aaaacctccaatggaaccttc 1140
>gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B21, complete sequence Length = 176875 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 133529 gaaggccgccgagagccatgaactg 133553
>gb|BC047304.1| Homo sapiens, clone IMAGE:4915405, mRNA Length = 1363 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 gaaggccgtcgagagccatgaactg 380 |||||||| |||||||||||||||| Sbjct: 835 gaaggccgccgagagccatgaactg 811
>gb|BT002340.1| Arabidopsis thaliana clone C104921 putative DEF (CLA1) protein (At4g15560) mRNA, complete cds Length = 2185 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Minus Query: 336 ccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagcc 395 |||||| |||||||| || ||||| || |||||||| | |||||| | ||||||||||| Sbjct: 2016 ccacttgagtttgccatcaagaagaccatcgagagcaagaaactgaacaacgtgcgagcc 1957 Query: 396 gaagccgccgatggagccttc 416 || || || ||||| ||||| Sbjct: 1956 aaaacctccaatggaaccttc 1936
>dbj|BS000176.1| Pan troglodytes chromosome 22 clone:RP43-006O21, map 22, complete sequences Length = 146754 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tgtttccccttatcaggatca 92 ||||||||||||||||||||| Sbjct: 56143 tgtttccccttatcaggatca 56163
>gb|AY946270.1| Zea mays 1-deoxy-D-xylulose 5-phosphate synthase 2 (dxs2) mRNA, partial cds Length = 1658 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 244 gcggcgatgtgcgacggcgtcagcccggcctcc 276 |||||||||||| |||||||||||| |||||| Sbjct: 1223 gcggcgatgtgccgcggcgtcagccctgcctcc 1191
>emb|Y14333.1|ATTRANSKE Arabidopsis thaliana mRNA for transketolase Length = 2235 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Minus Query: 336 ccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagcc 395 |||||| |||||||| || ||||| || |||||||| | |||||| | ||||||||||| Sbjct: 2091 ccacttgagtttgccatcaagaagaccatcgagagcaagaaactgaacaacgtgcgagcc 2032 Query: 396 gaagccgccgatggagccttc 416 || || || ||||| ||||| Sbjct: 2031 aaaacctccaatggaaccttc 2011
>gb|AY315652.1| Pueraria montana var. lobata 1-deoxy-D-xylulose 5-phosphate synthase (Dxs) mRNA, complete cds Length = 2679 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 331 ggccgccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagc 383 |||| |||||| | |||||| || |||||||| || || |||||||||||||| Sbjct: 2265 ggcctccacttcaatttgccatcaagaaggccatcaagggccatgaactgagc 2213
>dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, section 50/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tgtttccccttatcaggatca 92 ||||||||||||||||||||| Sbjct: 263171 tgtttccccttatcaggatca 263191
>dbj|AP000236.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-355D16, complete sequence Length = 159121 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tgtttccccttatcaggatca 92 ||||||||||||||||||||| Sbjct: 83152 tgtttccccttatcaggatca 83172
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cggcgatgtgcgacggcgtca 265 ||||||||||||||||||||| Sbjct: 1363828 cggcgatgtgcgacggcgtca 1363848
>gb|U27099.1|ATU27099 Arabidopsis thaliana DEF (CLA1) mRNA, complete cds Length = 2458 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Minus Query: 336 ccacttaagtttgccgtcgagaaggccgtcgagagccatgaactgagccacgtgcgagcc 395 |||||| |||||||| || ||||| || |||||||| | |||||| | ||||||||||| Sbjct: 2016 ccacttgagtttgccatcaagaagaccatcgagagcaagaaactgaacaacgtgcgagcc 1957 Query: 396 gaagccgccgatggagccttc 416 || || || ||||| ||||| Sbjct: 1956 aaaacctccaatggaaccttc 1936
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ggcgtcagcccggcctccgcc 279 ||||||||||||||||||||| Sbjct: 56848 ggcgtcagcccggcctccgcc 56828
>dbj|AP000195.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B355D16-T1073, segment 1/8, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tgtttccccttatcaggatca 92 ||||||||||||||||||||| Sbjct: 75970 tgtttccccttatcaggatca 75950
>dbj|AP000091.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, B335D16-P10G11 region, segment 1/7 Length = 100000 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tgtttccccttatcaggatca 92 ||||||||||||||||||||| Sbjct: 75970 tgtttccccttatcaggatca 75950
>ref|NM_031588.1| Rattus norvegicus neuregulin 1 (Nrg1), mRNA Length = 3272 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>ref|XM_476952.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2870 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 478 ggcttgcagaacctggcgtcggcgacggtgac 509 ||||||||||| | ||||||||||||||||| Sbjct: 2044 ggcttgcagaaacgcgcgtcggcgacggtgac 2013
>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0069E11, complete sequence Length = 136959 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 671 cgttgcctctcggatagcgg 690 |||||||||||||||||||| Sbjct: 25200 cgttgcctctcggatagcgg 25181
>ref|XM_592191.2| PREDICTED: Bos taurus similar to heat shock 70kDa protein 1-like (LOC540190), mRNA Length = 1854 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caggatcattaaattttctg 104 |||||||||||||||||||| Sbjct: 250 caggatcattaaattttctg 231
>ref|XM_986362.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 4 (Nrg1), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_986458.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 7 (Nrg1), mRNA Length = 5225 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 322 tggtccaagggcttgcagaa 303
>ref|XM_986492.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 8 (Nrg1), mRNA Length = 1522 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_986605.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 10 (Nrg1), mRNA Length = 5860 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_986645.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 11 (Nrg1), mRNA Length = 5851 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_986682.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 12 (Nrg1), mRNA Length = 5875 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_620642.3| PREDICTED: Mus musculus neuregulin 1, transcript variant 1 (Nrg1), mRNA Length = 1421 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 321 tggtccaagggcttgcagaa 302
>ref|XM_922594.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 18 (Nrg1), mRNA Length = 5213 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 323 tggtccaagggcttgcagaa 304
>ref|XM_922607.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 20 (Nrg1), mRNA Length = 1770 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 321 tggtccaagggcttgcagaa 302
>ref|XM_922629.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 26 (Nrg1), mRNA Length = 5862 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 321 tggtccaagggcttgcagaa 302
>ref|XM_922636.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 27 (Nrg1), mRNA Length = 5853 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 321 tggtccaagggcttgcagaa 302
>ref|XM_922562.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 15 (Nrg1), mRNA Length = 5877 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 321 tggtccaagggcttgcagaa 302
>ref|XM_900835.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 13 (Nrg1), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_900817.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 8 (Nrg1), mRNA Length = 5224 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 322 tggtccaagggcttgcagaa 303
>ref|XM_990248.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 14 (Nrg1), mRNA Length = 5860 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_990278.1| PREDICTED: Mus musculus neuregulin 1, transcript variant 15 (Nrg1), mRNA Length = 5851 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>ref|XM_900803.2| PREDICTED: Mus musculus neuregulin 1, transcript variant 3 (Nrg1), mRNA Length = 5875 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 320 tggtccaagggcttgcagaa 301
>gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete sequence Length = 111276 Score = 40.1 bits (20), Expect = 9.5 Identities = 47/56 (83%) Strand = Plus / Minus Query: 433 acctcgtgggatttggcgaggctcctgatgagggcgtggtccaagggcttgcagaa 488 |||||||| |||||||| ||||| | ||||| | |||||||| ||||||||||| Sbjct: 51107 acctcgtgtgatttggctaggctgcgaatgagtgaatggtccaacggcttgcagaa 51052
>gb|AY057439.2| Azotobacter vinelandii GroEL (groEL) and group II intron-associated open reading frame genes, complete cds; and probable pseudouridylate synthase (rsuA) gene, partial cds Length = 5054 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 549 gagccttcctcgacggtgat 530
>gb|AY195821.1| Uncultured bacterium clone M312053 NirK (nirK) gene, partial cds Length = 306 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 172 cgatgtgcgacggcgtcagc 153
>emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete genome; segment 4/10 Length = 348450 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 gcccgaggatgttgaacaccgtcg 244 ||||||||||||||||||| |||| Sbjct: 48270 gcccgaggatgttgaacacggtcg 48247
>emb|AL022602.1|MLCB268 Mycobacterium leprae cosmid B268 Length = 38859 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gcccgaggatgttgaacaccgtcg 244 ||||||||||||||||||| |||| Sbjct: 36955 gcccgaggatgttgaacacggtcg 36978
>emb|AJ224905.1|AXY224905 Alcaligenes xylosoxidans NCIMB 11015 nirK gene, partial Length = 425 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 199 cgatgtgcgacggcgtcagc 180
>gb|DQ401071.1| Hortaea werneckii ENA P-type ATPase 2 (ENA2) gene, complete cds Length = 3399 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tctgcaccgtcatgatggcg 204 |||||||||||||||||||| Sbjct: 2952 tctgcaccgtcatgatggcg 2933
>gb|DQ401070.1| Hortaea werneckii ENA P-type ATPase 1 (ENA1) gene, complete cds Length = 3733 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tctgcaccgtcatgatggcg 204 |||||||||||||||||||| Sbjct: 3144 tctgcaccgtcatgatggcg 3125
>dbj|AK142537.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630024L06 product:unclassifiable, full insert sequence Length = 4612 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 669 tggtccaagggcttgcagaa 688
>gb|L78814.1|MSGB1554CS Mycobacterium leprae cosmid B1554 DNA sequence Length = 36548 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 gcccgaggatgttgaacaccgtcg 244 ||||||||||||||||||| |||| Sbjct: 20274 gcccgaggatgttgaacacggtcg 20251
>gb|L78813.1|MSGB1551CS Mycobacterium leprae cosmid B1551 DNA sequence Length = 36548 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 gcccgaggatgttgaacaccgtcg 244 ||||||||||||||||||| |||| Sbjct: 20274 gcccgaggatgttgaacacggtcg 20251
>gb|S77424.1| groES=10 kda heat shock protein, groEL=57 kda heat shock protein [Pseudomonas aeruginosa, P1118, O:3, Genomic, 2047 nt] Length = 2047 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 933 gagccttcctcgacggtgat 914
>gb|AY123676.1| Pseudomonas aeruginosa strain ATCC 10145 Cpn60 (cpn60) gene, partial cds Length = 555 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 269 gagccttcctcgacggtgat 250
>dbj|AK051824.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230005F13 product:neuregulin 1, full insert sequence Length = 1630 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 323 tggtccaagggcttgcagaa 304
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 671 cgttgcctctcggatagcgg 690 |||||||||||||||||||| Sbjct: 8346274 cgttgcctctcggatagcgg 8346255
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 478 ggcttgcagaacctggcgtcggcgacggtgac 509 ||||||||||| | ||||||||||||||||| Sbjct: 4855612 ggcttgcagaaacgcgcgtcggcgacggtgac 4855581
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cgtcgagaaggccgtcgaga 369 |||||||||||||||||||| Sbjct: 189047 cgtcgagaaggccgtcgaga 189028
>gb|AE004854.1| Pseudomonas aeruginosa PAO1, section 415 of 529 of the complete genome Length = 11884 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 7514 gagccttcctcgacggtgat 7533
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 478 ggcttgcagaacctggcgtcggcgacggtgac 509 ||||||||||| | ||||||||||||||||| Sbjct: 41096 ggcttgcagaaacgcgcgtcggcgacggtgac 41065
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 478 ggcttgcagaacctggcgtcggcgacggtgac 509 ||||||||||| | ||||||||||||||||| Sbjct: 130125 ggcttgcagaaacgcgcgtcggcgacggtgac 130094
>dbj|AK100909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G24, full insert sequence Length = 2870 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 478 ggcttgcagaacctggcgtcggcgacggtgac 509 ||||||||||| | ||||||||||||||||| Sbjct: 2044 ggcttgcagaaacgcgcgtcggcgacggtgac 2013
>gb|AY644490.1| Uncultured bacterium clone GC234d1-G06 nitrite reductase K (nirK) gene, partial cds Length = 309 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 142 cgatgtgcgacggcgtcagc 123
>gb|AY644486.1| Uncultured bacterium clone GC234d1-E06 nitrite reductase K (nirK) gene, partial cds Length = 323 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 157 cgatgtgcgacggcgtcagc 138
>gb|AY644482.1| Uncultured bacterium clone GC234d1-E01 nitrite reductase K (nirK) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 156 cgatgtgcgacggcgtcagc 137
>gb|AF051831.1|AF051831 Alcaligenes xylosoxidans dissimilatory copper-containing nitrite reductase (nir) gene, complete cds Length = 1709 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 1288 cgatgtgcgacggcgtcagc 1269
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 671 cgttgcctctcggatagcgg 690 |||||||||||||||||||| Sbjct: 8417037 cgttgcctctcggatagcgg 8417018
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 160466 tggtccaagggcttgcagaa 160447
>gb|U17942.1|MIU17942 Mycobacterium intracellulare isolate 1373 65 kDa heat shock protein gene, partial cds Length = 360 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tcgagaaggccgtcgagagc 371 |||||||||||||||||||| Sbjct: 167 tcgagaaggccgtcgagagc 186
>gb|U17072.1|PAU17072 Pseudomonas aeruginosa GroEL (mopA) gene, complete cds Length = 1877 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 567 gagccttcctcgacggtgat 548
>gb|M63957.1|PSEGROESL Pseudomonas aeruginosa heat shock protein (groES and groEL) genes, complete cds Length = 2236 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gagccttcctcgacggtgat 428 |||||||||||||||||||| Sbjct: 927 gagccttcctcgacggtgat 908
>gb|U02323.1|RNU02323 Rattus norvegicus clone ndf42b neu differentiation factor mRNA, complete cds Length = 3136 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02322.1|RNU02322 Rattus norvegicus clone ndf42a neu differentiation factor mRNA, complete cds Length = 2402 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02321.1|RNU02321 Rattus norvegicus clone ndf41 neu differentiation factor mRNA, complete cds Length = 2737 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02320.1|RNU02320 Rattus norvegicus clone ndf40 neu differentiation factor mRNA, partial cds Length = 1255 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02319.1|RNU02319 Rattus norvegicus clone ndf38 neu differentiation factor mRNA, complete cds Length = 2328 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02318.1|RNU02318 Rattus norvegicus clone ndf22 neu differentiation factor mRNA, complete cds Length = 3272 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02317.1|RNU02317 Rattus norvegicus clone ndf20 neu differentiation factor mRNA, complete cds Length = 2525 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>gb|U02316.1|RNU02316 Rattus norvegicus clone ndf19 neu differentiation factor mRNA, complete cds Length = 2908 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tggtccaagggcttgcagaa 488 |||||||||||||||||||| Sbjct: 284 tggtccaagggcttgcagaa 265
>dbj|AB013078.1| Alcaligenes xylosoxidans nir gene for Nitrite Reductase (NiR), complete cds Length = 2375 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgatgtgcgacggcgtcagc 267 |||||||||||||||||||| Sbjct: 1530 cgatgtgcgacggcgtcagc 1511 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,256,748 Number of Sequences: 3902068 Number of extensions: 4256748 Number of successful extensions: 84176 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81255 Number of HSP's gapped (non-prelim): 2912 length of query: 695 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 672 effective length of database: 17,143,297,704 effective search space: 11520296057088 effective search space used: 11520296057088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)