ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1i18 |
|---|---|
| Clone Library Name | barley_pub |
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 95.1 bits (235), Expect = 2e-19 Identities = 43/127 (33%), Positives = 72/127 (56%) Frame = -1 Query: 699 RESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLE 520 + ++ Q K+ + E+ V EK+ F+ +R E+D+ L RK + + + E Sbjct: 857 KTQLELAQKKLHDFQDEIVESRVTREKEMFNFKRAEEDISRLRRKLETTKKPDMVPNCDE 916 Query: 519 KIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAN 340 + +E+ +Y+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGAN Sbjct: 917 ILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAN 976 Query: 339 DVKPIYI 319 D IYI Sbjct: 977 DFHRIYI 983
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 94.7 bits (234), Expect = 2e-19 Identities = 43/127 (33%), Positives = 71/127 (55%) Frame = -1 Query: 699 RESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLE 520 + ++ Q K+ + E+ V EKD F+ +R ++D+ L RK + + E Sbjct: 848 KAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPDNVPKCDE 907 Query: 519 KIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAN 340 + +E+ +Y+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGAN Sbjct: 908 ILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAN 967 Query: 339 DVKPIYI 319 D IYI Sbjct: 968 DFHRIYI 974
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 94.4 bits (233), Expect = 3e-19 Identities = 43/127 (33%), Positives = 71/127 (55%) Frame = -1 Query: 699 RESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLE 520 + ++ Q K+ + E+ V EKD F+ +R ++D+ L RK + + E Sbjct: 846 KAQLELAQKKLHDFQDEIVENSVTKEKDLFNFKRAQEDISRLRRKLETTKKPDNVPKCDE 905 Query: 519 KIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAN 340 + +E+ +Y+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGAN Sbjct: 906 ILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAN 965 Query: 339 DVKPIYI 319 D IYI Sbjct: 966 DFHRIYI 972
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 92.0 bits (227), Expect = 2e-18 Identities = 42/124 (33%), Positives = 71/124 (57%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 ++ VQ+++ + +A EK+ F+ +R ++D+ L RK R + E + Sbjct: 877 LEHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQ 936 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +E+ EY+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGA+D Sbjct: 937 EEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFH 996 Query: 330 PIYI 319 IYI Sbjct: 997 RIYI 1000
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 92.0 bits (227), Expect = 2e-18 Identities = 42/124 (33%), Positives = 71/124 (57%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 ++ VQ+++ + +A EK+ F+ +R ++D+ L RK R + E + Sbjct: 877 LEHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQ 936 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +E+ EY+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGA+D Sbjct: 937 EEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFH 996 Query: 330 PIYI 319 IYI Sbjct: 997 RIYI 1000
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 92.0 bits (227), Expect = 2e-18 Identities = 42/124 (33%), Positives = 71/124 (57%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 ++ VQ+++ + +A EK+ F+ +R ++D+ L RK R + E + Sbjct: 877 LEHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQ 936 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +E+ EY+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGA+D Sbjct: 937 EEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFH 996 Query: 330 PIYI 319 IYI Sbjct: 997 RIYI 1000
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 91.7 bits (226), Expect = 2e-18 Identities = 41/124 (33%), Positives = 71/124 (57%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 ++ VQ+++ + +A EK+ F+ +R ++D+ L RK R + E + Sbjct: 877 LEHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQ 936 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +E+ EY+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGA+D Sbjct: 937 EEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFH 996 Query: 330 PIYI 319 +YI Sbjct: 997 RVYI 1000
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 91.7 bits (226), Expect = 2e-18 Identities = 41/124 (33%), Positives = 71/124 (57%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 ++ VQ+++ + +A EK+ F+ +R ++D+ L RK R + E + Sbjct: 878 LEHVQTRLREIQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQ 937 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +E+ EY+ L C C R+K+ V+TKC+H+FC +C++ RQR+CP C +FGA+D Sbjct: 938 EEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFH 997 Query: 330 PIYI 319 +YI Sbjct: 998 RVYI 1001
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 90.9 bits (224), Expect = 3e-18 Identities = 36/125 (28%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 +++ +++ ++ VA LE + + +R++++L RKA ++ + + ++++ Sbjct: 919 LEKYHAQMKEAQQVVAEKTSSLEAEAYKTKRLQEELAQFKRKAERMKKMEMSGTTIDEVM 978 Query: 510 -QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDV 334 +E+ EY+ L C C+ ++K+ V++KC+H+FC DC++ RQR+CP C +FGAND Sbjct: 979 IEEIREYKETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGANDY 1038 Query: 333 KPIYI 319 +Y+ Sbjct: 1039 HRLYL 1043
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 82.0 bits (201), Expect = 2e-15 Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 5/109 (4%) Frame = -1 Query: 630 ELEKDRFSKRRIEDDLESLSRKASSLRAKTQASS-----VLEKIHQEVSEYRGILKCGVC 466 E+E +F ++R E++LE+L K ++ + VLE+ ++++ E L C C Sbjct: 732 EIEDFKFKRQRAEEELETLRIKYERVKRNESVPAQSGDQVLEEANRQMKE---TLTCPSC 788 Query: 465 RDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 + R K+ ++ KCYHLFC CI+ + RQR+CP C +FGAND I+I Sbjct: 789 KTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIFI 837
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 81.6 bits (200), Expect = 2e-15 Identities = 36/104 (34%), Positives = 60/104 (57%) Frame = -1 Query: 630 ELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQK 451 E+E+ +F ++R E++LE + K + A + + + + + + L C C+ R K Sbjct: 725 EVEEAKFKRQRAEEELELVRVKYERAKRNDSAQTGDQVLQEANRQMKETLTCPSCKTRPK 784 Query: 450 EVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 + ++ KCYHLFC CI+ + RQR+CP C +FGAND I+I Sbjct: 785 DCIMLKCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIFI 828
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 74.3 bits (181), Expect = 3e-13 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 6/131 (4%) Frame = -1 Query: 693 SMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQ------AS 532 + D + +V R ++ L E + S ++ E +L L ++ S Q + Sbjct: 551 AQDALHQEVERVNAKLESTLKEHTDLQESNKKRELELAKLQKQLQSTENILQKYKTNNTN 610 Query: 531 SVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALS 352 S+L++ Q++ R I KC VC K+ IT C H+FC+ C Q+ L R RRCPSC Sbjct: 611 SLLQEDEQQLEALRSIAKCSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRRCPSCNRG 670 Query: 351 FGANDVKPIYI 319 F AND+ I++ Sbjct: 671 FSANDLLSIHL 681
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 70.9 bits (172), Expect = 4e-12 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = -1 Query: 594 EDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCR-DRQKEVVITKCYHLF 418 +++ E RK T A +E+ +R + KC VC +R K+ +I+ C H F Sbjct: 596 DEEHEKEKRKLKDTGVSTSA--------EELKTFRAMCKCSVCNFERWKDRIISLCGHGF 647 Query: 417 CNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 C CIQK + RQRRCP C FGA+DV PI++ Sbjct: 648 CYQCIQKRIETRQRRCPICGRGFGASDVIPIHL 680
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 69.7 bits (169), Expect = 8e-12 Identities = 35/104 (33%), Positives = 53/104 (50%) Frame = -1 Query: 630 ELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQK 451 EL + ++E L+S + SS+L++ +++ R I KC VC K Sbjct: 589 ELNEKNLMMGKLEHKLKSTESLLKKYKTNN-TSSILQEDERQLEALRSIAKCSVCSKNWK 647 Query: 450 EVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 + IT C H+FC C Q+ L R RRCP+C F AND+ I++ Sbjct: 648 DTAITVCGHVFCLGCTQERLAARLRRCPTCNKGFSANDLLSIHL 691
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 68.6 bits (166), Expect = 2e-11 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Frame = -1 Query: 636 LVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEK---------IHQEVSEYRGI 484 + E ++ ++ +++D+ + + L+ + A + + I QE + + Sbjct: 705 VAEAIAEKEARAKLQDEADGQMKIIKKLKERQDAVAAASQTGMSDHEWAITQERDKLLKL 764 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIY 322 LKC C K+ VI KC H FC C+++ + +RQR+CP+C L+F D++ +Y Sbjct: 765 LKCSCCEQNFKQQVIVKCMHTFCKQCLEQRIASRQRKCPACGLAFAKEDIQTLY 818
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 67.8 bits (164), Expect = 3e-11 Identities = 33/104 (31%), Positives = 52/104 (50%) Frame = -1 Query: 630 ELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQK 451 EL++ K + + L+ K SS R K + +E R ++ C VCR K Sbjct: 605 ELKEKAIDKEQEAEKLKVRLDKVSSERDKWKTKCQSNSTEEE-EMLRNLVLCSVCRSNFK 663 Query: 450 EVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 ++ C H+FCN+C+ L NR R+CPSC +F +D P ++ Sbjct: 664 NTILKGCGHVFCNECVDNRLANRMRKCPSCNKAFDRSDAMPAHL 707
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 63.9 bits (154), Expect = 4e-10 Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 7/134 (5%) Frame = -1 Query: 699 RESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRA-------KT 541 + S++++Q + +S ++ L +L + + L K L K Sbjct: 568 KRSLEKLQEESNKSIADMTHLETKLNDTEIELKHFKQKASHLESKCEKLHDTLFRGNNKN 627 Query: 540 QASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + SS E + +E++ +R ++ C +C K + I C H+FC +C ++ L R R+CP+C Sbjct: 628 KGSSD-EALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTC 686 Query: 360 ALSFGANDVKPIYI 319 +F +ND+ +++ Sbjct: 687 NKAFSSNDLLTVHL 700
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 63.5 bits (153), Expect = 6e-10 Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 17/131 (12%) Frame = -1 Query: 660 SRVEVAGLLVELEKDRF--SKRRIEDDLESLSRKASSLRAK-TQASSVLEKIH------- 511 S+ + LV+ E ++ K ++E L L + +L K T + +K+H Sbjct: 513 SKANKSSTLVQQECNKLIEEKAKMESKLNDLEIETKNLATKLTYQENKSKKLHKTLVSNG 572 Query: 510 -------QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALS 352 +E+ +R ++ C +C K+ VI C H+FC DC ++ L R R+CP+C Sbjct: 573 GDNGALAEELENFRTVVYCSLCSKNWKDTVIKTCGHVFCADCCKERLAARMRKCPTCNKG 632 Query: 351 FGANDVKPIYI 319 F +ND+ +++ Sbjct: 633 FSSNDLLVVHL 643
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 61.6 bits (148), Expect = 2e-09 Identities = 30/103 (29%), Positives = 47/103 (45%) Frame = -1 Query: 630 ELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQK 451 E+EK + + D ++ KA L +E R C +CR+ K Sbjct: 612 EVEKMKVRLEHAQKDRDNWKNKA------------LSNSSEEEEMLRTFALCTICRNNFK 659 Query: 450 EVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIY 322 + C HLFCN C+ + NR R+CP+C+ +F DV P++ Sbjct: 660 NTALKTCGHLFCNQCVDDRISNRMRKCPTCSRAFDKMDVMPVH 702
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 58.5 bits (140), Expect = 2e-08 Identities = 21/68 (30%), Positives = 40/68 (58%) Frame = -1 Query: 522 EKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGA 343 + + +E+ +R ++ C +C K + I C H+FC DC ++ L R R+CP+C F + Sbjct: 626 DSMAEELENFRTLVYCSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRKCPTCNKPFSS 685 Query: 342 NDVKPIYI 319 ND+ +++ Sbjct: 686 NDLLMVHL 693
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 57.0 bits (136), Expect = 5e-08 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Frame = -1 Query: 642 GLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQA--SSVLEK------IHQEVSEYRG 487 G ELE + + IE+ + L K SS AK++ ++L + +E+ +R Sbjct: 551 GTKTELES-KIKDKDIEN--KQLKIKVSSAEAKSKKLYKTLLSNGGDNGALAEELENFRT 607 Query: 486 ILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 I+ C +C K + C H+FC+ C ++ L R R+CP+C F +ND+ I++ Sbjct: 608 IIYCSLCSKNWKNTALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSNDLLSIHL 663
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 56.2 bits (134), Expect = 9e-08 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = -1 Query: 507 EVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKP 328 E+ E R I C +C K+ + C H+FC+ C Q L R R+CP+C F ND+ Sbjct: 638 EIDELRSIAMCSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLRKCPNCNKPFSQNDLLT 697 Query: 327 IYI 319 +++ Sbjct: 698 VHL 700
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 49.7 bits (117), Expect = 9e-06 Identities = 20/56 (35%), Positives = 35/56 (62%) Frame = -1 Query: 507 EVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAN 340 E+++ +L+C +C+D + V+T+C H FC+ CI++ L N++ RCP C N Sbjct: 22 ELADLDSLLRCHICKDMLQTPVLTQCGHTFCSLCIREYL-NKESRCPLCLAELRQN 76
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL R+ +CP C Sbjct: 8 VEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLC 64
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLC 64
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 48.1 bits (113), Expect = 3e-05 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRR--CPSCALSFGANDVKPIY 322 +C +C D K+ V++ C HLFC C+ + L R CP C + N V PIY Sbjct: 25 ECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIY 79
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 48.1 bits (113), Expect = 3e-05 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Frame = -1 Query: 609 SKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITK- 433 S + E L L R ++ T+ + +H E L C +C D K + TK Sbjct: 10 SSKTWELSLYELHRTPQAIMDGTEIAVSPRSLHSE-------LMCPICLDMLKNTMTTKE 62 Query: 432 CYHLFCNDCIQKLLRNRQRRCPSC 361 C H FC+DCI LR+ + CP+C Sbjct: 63 CLHRFCSDCIVTALRSGNKECPTC 86
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +E++ ++ + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 VEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 47.4 bits (111), Expect = 4e-05 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L+C +C++ +IT C H FC+ CIQ+ L N +RCP+C Sbjct: 26 LRCHICKEFFTAPMITGCGHTFCSLCIQRYLTNTSQRCPTC 66
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 46.6 bits (109), Expect = 7e-05 Identities = 18/49 (36%), Positives = 33/49 (67%) Frame = -1 Query: 507 EVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 ++++ +L+C +C+D K V+T C H FC+ CI+K L+ ++ +CP C Sbjct: 22 QLTDLDSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQ-KESKCPLC 69
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 46.2 bits (108), Expect = 1e-04 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K+ + TK C H FC+DCI LR+ + CP+C Sbjct: 44 LMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTC 85
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 46.2 bits (108), Expect = 1e-04 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 ++++ + + IL+C +C + KE V TKC H+FC C+ KLL ++ +CP C Sbjct: 8 IQEVQNVLHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC+DCI LR+ + CP+C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC+DCI LR+ + CP+C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC+DCI LR+ + CP+C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC+DCI LR+ + CP+C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC+DCI LR+ + CP+C Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC+DCI LR+ + CP+C Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 45.4 bits (106), Expect = 2e-04 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -1 Query: 543 TQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPS 364 T A+ + ++ E +L+C +C+D K V+T C H FC+ CI+ L N + +CP Sbjct: 5 TSAADFKKSKVPQLQELDDLLRCHICKDFLKNPVLTPCGHTFCSLCIRGYLSN-EPKCPL 63 Query: 363 C 361 C Sbjct: 64 C 64
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 45.4 bits (106), Expect = 2e-04 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = -1 Query: 543 TQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPS 364 T + LEK+ +EV+ C +C D E + +C H FC +CI ++ +N CP Sbjct: 5 TTSKMSLEKMWEEVT-------CSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPE 57 Query: 363 CALSFGANDVKP 328 C F +++P Sbjct: 58 CRQQFLLRNLRP 69
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/46 (43%), Positives = 27/46 (58%) Frame = -1 Query: 486 ILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSF 349 +L+C +C+D K V+T C H FC+ CI+ L N Q CP C F Sbjct: 25 LLRCHICKDFLKVPVLTPCGHTFCSLCIRTHL-NNQPNCPLCLFEF 69
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 44.7 bits (104), Expect = 3e-04 Identities = 23/91 (25%), Positives = 42/91 (46%) Frame = -1 Query: 606 KRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCY 427 +R I +D ++ L + + + L+K+ Q C C++ + V T+C+ Sbjct: 698 QRLIREDCQNQKLWDEVLASLVEGPNFLKKLEQS-------FMCVCCQELVYQPVTTECF 750 Query: 426 HLFCNDCIQKLLRNRQRRCPSCALSFGANDV 334 H C DC+Q+ + + CP+C G N V Sbjct: 751 HNVCKDCLQRSFKAQVFSCPACRHDLGQNYV 781
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 ++++ + + IL+C +C + KE V T+C H+FC C+ KLL ++ +CP C Sbjct: 8 IQEVQNVLHAMQKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLC 64
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 44.7 bits (104), Expect = 3e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALS 352 VS L+C VC+D VIT C H FC+ CI++ L + + +CP+C S Sbjct: 21 VSPLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCL-STEGKCPACRSS 70
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC DCI LR+ + CP+C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC DCI LR+ + CP+C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC DCI LR+ + CP+C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC DCI LR+ + CP+C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITK-CYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C D K + TK C H FC DCI LR+ + CP+C Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 43.9 bits (102), Expect = 5e-04 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = -1 Query: 489 GILKCGVCRDRQKEVV-------ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 G + C +C D E+V T+C H+FC+ C++ L+N CP+C Sbjct: 128 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKRYH 186 Query: 330 PIYI 319 PIYI Sbjct: 187 PIYI 190
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 43.9 bits (102), Expect = 5e-04 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = -1 Query: 489 GILKCGVCRDRQKEVV-------ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 G + C +C D E+V T+C H+FC+ C++ L+N CP+C Sbjct: 132 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKRYH 190 Query: 330 PIYI 319 PIYI Sbjct: 191 PIYI 194
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 43.9 bits (102), Expect = 5e-04 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = -1 Query: 489 GILKCGVCRDRQKEVV-------ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 G + C +C D E+V T+C H+FC+ C++ L+N CP+C Sbjct: 132 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINHKRYH 190 Query: 330 PIYI 319 PIYI Sbjct: 191 PIYI 194
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 43.1 bits (100), Expect = 8e-04 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Frame = -1 Query: 528 VLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLL-----RNRQRRCPS 364 VL++++ + G++ C +C D +E + +KC+H FC CI++ + N + CP Sbjct: 520 VLKRLNNFPGDDIGVVICQLCNDEAEEPIESKCHHKFCRLCIKEYVESFMENNNKLTCPV 579 Query: 363 CALSFGANDVKP 328 C + + +P Sbjct: 580 CHIGLSIDLSQP 591
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 43.1 bits (100), Expect = 8e-04 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALS 352 L+C VC+D VIT C H FC+ CI++ L + + +CP+C S Sbjct: 28 LRCQVCKDFFDNPVITSCSHTFCSLCIRRCL-STEGKCPTCRSS 70
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 43.1 bits (100), Expect = 8e-04 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 Query: 498 EYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDV 334 ++ + C VC E V + C HLFC CI K + + CP+C L G D+ Sbjct: 303 DFLSSVTCQVCDHLLSEPVQSPCRHLFCRSCIAKYIYSLGPHCPACTLPCGPADL 357
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 42.7 bits (99), Expect = 0.001 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%) Frame = -1 Query: 678 QSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVS 499 + +GR R ELE++ + E++ E +S + L Q S E+ +S Sbjct: 69 ERSLGRFRGRFEDEDEELEEEEELEEEEEEEEEDMSHFSLRLEGGRQDSEDEEERLINLS 128 Query: 498 EYRGILKCGVCRDRQKEVV-ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIY 322 E + C +C+ + IT+C H FC CI + RCP C + + +P+Y Sbjct: 129 ELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF-YYSNRCPKC--NIVVHQTQPLY 185
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 42.7 bits (99), Expect = 0.001 Identities = 20/77 (25%), Positives = 38/77 (49%) Frame = -1 Query: 564 ASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRN 385 ++S+ T +L+K+ + + C +C ++IT+C H+FC CI + L+ Sbjct: 607 STSVEDVTDKPELLQKLVAALQDGEDF-DCPICISPPTNIIITRCAHIFCRACILQTLQR 665 Query: 384 RQRRCPSCALSFGANDV 334 + CP C S +D+ Sbjct: 666 SKPLCPLCRGSLTQSDL 682
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 42.0 bits (97), Expect = 0.002 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +C +C D VIT C H+FC CI ++++N Q +CP C Sbjct: 759 ECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLC 800
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Frame = -1 Query: 594 EDDLESLSRKASSLRAKTQASSVLE--------KIHQEVSEYRGILKCGVCRDRQKEVVI 439 ED+ +S ++ A++ + + K+ E ++ L C +CR KE VI Sbjct: 115 EDETNGVSDQSEGKAARSNKRKIEDGDGDQKKRKVDDEEDDFTEDLTCPLCRSLFKEPVI 174 Query: 438 TKCYHLFCNDCIQKLLRNRQR-RCPSC 361 +C H FC CI K + CP C Sbjct: 175 LECGHNFCKHCIDKSWESASAFSCPEC 201
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/86 (24%), Positives = 38/86 (44%) Frame = -1 Query: 597 IEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLF 418 I +D ++ L + + L+K+ Q C C++ + V T+C+H Sbjct: 700 IREDCQNQKLWDEVLSHLVEGPNFLKKLEQS-------FMCVCCQELVYQPVTTECFHNV 752 Query: 417 CNDCIQKLLRNRQRRCPSCALSFGAN 340 C DC+Q+ + + CP+C G N Sbjct: 753 CKDCLQRSFKAQVFSCPACRHDLGQN 778
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Frame = -1 Query: 582 ESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCI 403 E +SR SS A + LEKI Q +L C +C DR K+ + C H FC C+ Sbjct: 17 ELMSRPPSSRPA--DFVNPLEKIEQ-------LLTCPICLDRYKQPKLLPCQHTFCYPCL 67 Query: 402 QKL--LRNRQRRCPSC 361 + +R +CP C Sbjct: 68 ESCADTLHRNLKCPEC 83
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 41.2 bits (95), Expect = 0.003 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 15/105 (14%) Frame = -1 Query: 630 ELEKDRFSKRRIEDDLESLSRKAS-------SLRAKTQASSVLEKIHQE--------VSE 496 +L + KR+ + S+ +S +++A Q +KIH + S+ Sbjct: 228 QLNPHKMKKRKRGPEFVKKSKTSSGNSIQWKNMKAFNQMKDSCKKIHLDNNLLVLDYPSD 287 Query: 495 YRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + + C VC + V T C HLFC CI K ++ CPSC Sbjct: 288 FVKSVSCLVCEHILSDPVQTSCKHLFCRICILKYIKLMGCYCPSC 332
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +C +C D VIT C H+FC CI + ++N Q +CP C Sbjct: 756 ECAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLC 797
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 41.2 bits (95), Expect = 0.003 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C VC + + V T+C H+FC CI L+N + CP C Sbjct: 36 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 74
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 41.2 bits (95), Expect = 0.003 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C VC + + V T+C H+FC CI L+N + CP C Sbjct: 36 CAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 74
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -1 Query: 537 ASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQR-----R 373 ASSVLE I +EV+ C +C + KE V C H FC CI + + Sbjct: 2 ASSVLEMIKEEVT-------CPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGN 54 Query: 372 CPSCALSFGANDVKP 328 CP C + + +++P Sbjct: 55 CPVCRVPYPFGNLRP 69
>RAD5_CRYNE (Q5KPG8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1198 Score = 40.8 bits (94), Expect = 0.004 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Frame = -1 Query: 582 ESLSRKASSLRAKTQAS---SVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCN 412 + ++ A +RA+T + K+ +E+ E C +C + + V+ CYH C Sbjct: 882 DMIAMYAGGIRAETPEDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQ 941 Query: 411 DCIQKLL-----RNRQRRCPSC 361 DCI + + +N+ CPSC Sbjct: 942 DCIVEWIGTCEDQNKIASCPSC 963
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 40.8 bits (94), Expect = 0.004 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = -1 Query: 588 DLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDR-QKEVVITKCYHLFCN 412 D++S KA+S K SS ++ ++ +GI C +C D + V+ KC H FC Sbjct: 529 DIDSDDSKAASPPLKGSVSSEASELDKKE---KGI--CVICMDTISNKKVLPKCKHEFCA 583 Query: 411 DCIQKLLRNRQRRCPSCALSFG 346 CI K + + + CP+C S+G Sbjct: 584 PCINKAM-SYKPICPTCQTSYG 604
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 40.8 bits (94), Expect = 0.004 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = -1 Query: 561 SSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNR 382 SS QAS + ++ Q E +C +C D + ++++ C H FC CI K +R Sbjct: 131 SSSVTSCQASLWMGRVKQLTDEE----ECCICMDGRADLILP-CAHSFCQKCIDK-WSDR 184 Query: 381 QRRCPSCALSF-GAND 337 R CP C L GAN+ Sbjct: 185 HRNCPICRLQMTGANE 200
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 40.8 bits (94), Expect = 0.004 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = -1 Query: 561 SSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNR 382 SS QAS + ++ Q E +C +C D + ++++ C H FC CI K +R Sbjct: 131 SSSVTSCQASLWMGRVKQLTDEE----ECCICMDGRADLILP-CAHSFCQKCIDK-WSDR 184 Query: 381 QRRCPSCALSF-GAND 337 R CP C L GAN+ Sbjct: 185 HRNCPICRLQMTGANE 200
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C D +E +TKC H FC CI + L + RCP C Sbjct: 136 CPICFDMIEEAYMTKCGHSFCYKCIHQSLED-NNRCPKC 173
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C D +E +TKC H FC CI + L + RCP C Sbjct: 138 CPICFDMIEEAYMTKCGHSFCYKCIHQSLED-NNRCPKC 175
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 40.0 bits (92), Expect = 0.007 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = -1 Query: 540 QASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 QAS + ++ Q E +C +C D + ++++ C H FC CI K +R R CP C Sbjct: 138 QASLWMGRVKQLTDEE----ECCICMDGRADLILP-CAHSFCQKCIDK-WSDRHRNCPIC 191 Query: 360 ALSF-GAND 337 L GAN+ Sbjct: 192 RLQMTGANE 200
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 40.0 bits (92), Expect = 0.007 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = -1 Query: 540 QASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 QAS + ++ Q E +C +C D + ++++ C H FC CI K +R R CP C Sbjct: 138 QASLWMGRVKQLTDEE----ECCICMDGRADLILP-CAHSFCQKCIDK-WSDRHRNCPIC 191 Query: 360 ALSF-GAND 337 L GAN+ Sbjct: 192 RLQMTGANE 200
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 40.0 bits (92), Expect = 0.007 Identities = 30/97 (30%), Positives = 47/97 (48%) Frame = -1 Query: 651 EVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCG 472 + AG+L + E E+ ESL+ +SS QAS + ++ Q E +C Sbjct: 113 QAAGVLAQSETS-------EEAAESLTSVSSS-----QASLWMGRLKQPTDED----ECC 156 Query: 471 VCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +C D + ++++ C H FC CI K +R R CP C Sbjct: 157 ICMDGRVDLILP-CAHSFCQKCIDK-WSDRHRSCPVC 191
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 40.0 bits (92), Expect = 0.007 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +C +C+D V T+C H +C+ CI++ L R RCP C Sbjct: 28 RCYICKDLLNAPVRTQCDHTYCSQCIREFLL-RDNRCPLC 66
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 40.0 bits (92), Expect = 0.007 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 8/127 (6%) Frame = -1 Query: 696 ESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEK 517 E + +K+ V+V L+ + E++ E+D L + S+ AK S+ L Sbjct: 837 EDLSSGNNKLITESVDVKTLIPDTEEEEDEVPPFEND--ELDKLIESVEAKFIDSNQLIP 894 Query: 516 IHQEVSEYRGILKCGVCRDRQKE---VVITKCYHLFCNDCIQKL-----LRNRQRRCPSC 361 + +C +C E V+T+C H+FC +C+++ ++ Q++CP+C Sbjct: 895 V-----------ECSICTAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNC 943 Query: 360 ALSFGAN 340 N Sbjct: 944 RRDINLN 950
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 39.3 bits (90), Expect = 0.012 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 +C +C D VIT C H+FC CI +++ + Q +CP C Sbjct: 753 ECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLC 794
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKL--LRNRQRRCPSC 361 S+ L + +EV+ C +C D ++ V C H+FC C + + + CP C Sbjct: 4 SAPLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLC 56 Query: 360 ALSFGANDVKPIY 322 F +++P++ Sbjct: 57 KKPFKKENIRPVW 69
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKL--LRNRQRRCPSC 361 S+ L + +EV+ C +C D ++ V C H+FC C + + + CP C Sbjct: 4 SAPLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLC 56 Query: 360 ALSFGANDVKPIY 322 F +++P++ Sbjct: 57 KKPFKKENIRPVW 69
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 39.3 bits (90), Expect = 0.012 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = -1 Query: 597 IEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILK----CGVCRDRQKEVVITKC 430 ++DD S S +L +SS +E+I E+ L+ C +C +E V T C Sbjct: 31 VKDDSVSGSASTGNL-----SSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPC 85 Query: 429 YHLFCNDCIQKLLRNRQRRCP 367 H FC CI K +R+ +CP Sbjct: 86 GHRFCKACIIKSIRDAGHKCP 106
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 39.3 bits (90), Expect = 0.012 Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = -1 Query: 486 ILKCGVCRDRQK-EVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +L+CG+C + V+I +C H +C+ CI+K L + + +CP+C ++ D++ Sbjct: 22 LLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFL-SYKTQCPTCCVAVTEPDLR 73
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 39.3 bits (90), Expect = 0.012 Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = -1 Query: 486 ILKCGVCRDRQK-EVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVK 331 +L+CG+C + ++I +C H +C+ CI+K L + + +CP+C ++ D+K Sbjct: 22 LLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFL-SYKTQCPTCCVTVTEPDLK 73
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/62 (29%), Positives = 32/62 (51%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPI 325 + E + +C +C++ K VIT C H FC+ CI++ L CP C +++K + Sbjct: 27 LKELDSLQRCYICKEFLKAPVITSCNHTFCSHCIREYLIVNS-HCPLCKAEQFESNLKRV 85 Query: 324 YI 319 + Sbjct: 86 IL 87
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 38.9 bits (89), Expect = 0.015 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLR--NRQRRCPSCALSFGANDVK 331 V E + L+C +C + KE ++ +C H +C +C+ L + + RCP C S + Sbjct: 7 VPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSSP 66 Query: 330 P 328 P Sbjct: 67 P 67
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 38.9 bits (89), Expect = 0.015 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L+C +C + + +IT C H FC+ CI+ LR CP+C Sbjct: 27 LRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHP-MCPAC 66
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 38.9 bits (89), Expect = 0.015 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%) Frame = -1 Query: 636 LVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRD- 460 ++E E+D ++ + E+ R A+ K + ++ KI +E +C +C Sbjct: 770 IIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKIKEEN-------ECSICTQV 822 Query: 459 --RQKEVVITKCYHLFCNDCI------QKLLRNRQRRCPSC 361 E+V+T C H FC CI QK L+ +++ CP+C Sbjct: 823 PIPYSEMVVTPCAHTFCLSCILEHLDFQKELK-KEKLCPNC 862
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 38.9 bits (89), Expect = 0.015 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQK--LLRNRQRRCPSC 361 L C VC + KE V T C H FC C+ + +++ RCP C Sbjct: 11 LSCSVCLELFKEPVTTPCGHNFCTSCLDETWVVQGPPYRCPQC 53
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 38.9 bits (89), Expect = 0.015 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + V T C HLFC CI + L+ CPSC Sbjct: 288 ISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSC 328
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 38.9 bits (89), Expect = 0.015 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI 319 L C +C K+ +T C H FC CI LRN+ CP C+ N + P ++ Sbjct: 50 LLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKS-DCPCCSQHLTNNQLYPNFL 103
>UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC| protein interacting with PKC) (Protein kinase C-binding protein beta-15) Length = 498 Score = 38.9 bits (89), Expect = 0.015 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Frame = -1 Query: 663 RSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGI 484 R+R E + + D + R+ + E+L R+ + + Q + L+ H ++ + + Sbjct: 206 RARPEAYQIPASYQPDEEERARLAGEEEAL-RQYEQRKQQQQEGNYLQ--HVQLEQRSLV 262 Query: 483 L-----KCGVCRD---RQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L +C VC + VV+ +C H FC +C+Q +RN Q SC Sbjct: 263 LNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSC 311
>UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting protein 3| (Hepatitis B virus X-associated protein 4) (HBV-associated factor 4) (RING finger protein 54) Length = 500 Score = 38.5 bits (88), Expect = 0.020 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Frame = -1 Query: 663 RSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGI 484 R+R E + + D + R+ + E+L R+ + + Q + L+ H ++ + + Sbjct: 208 RARPEAYQVPASYQPDEEERARLAGEEEAL-RQYQQRKQQQQEGNYLQ--HVQLDQRSLV 264 Query: 483 L-----KCGVCRD---RQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L +C VC + VV+ +C H FC +C+Q +RN Q SC Sbjct: 265 LNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSC 313
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 38.5 bits (88), Expect = 0.020 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = -1 Query: 567 KASSLRAKTQASSV---LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQK 397 + S L A A+S LE + E S C VC + KE VI +C H FC CI + Sbjct: 3 ETSLLEAGASAASTAAALENLQVEAS-------CSVCLEYLKEPVIIECGHNFCKACITR 55 Query: 396 LLRNRQR--RCPSCALSFGANDVKP 328 + +R CP C + ++P Sbjct: 56 WWEDLERDFPCPVCRKTSRYRSLRP 80
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 38.5 bits (88), Expect = 0.020 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = -1 Query: 567 KASSLRAKTQASSV---LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQK 397 + S L A A+S LE + E S C VC + KE VI +C H FC CI + Sbjct: 3 ETSLLEAGASAASTAAALENLQVEAS-------CSVCLEYLKEPVIIECGHNFCKACITR 55 Query: 396 LLRNRQR--RCPSCALSFGANDVKP 328 + +R CP C + ++P Sbjct: 56 WWEDLERDFPCPVCRKTSRYRSLRP 80
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 38.5 bits (88), Expect = 0.020 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRR--CPSCALSFGANDVK 331 V E + L+C +C + KE ++ +C H +C DC+ L ++ CP C S + Sbjct: 7 VPELQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSSSP 66 Query: 330 P 328 P Sbjct: 67 P 67
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 38.5 bits (88), Expect = 0.020 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = -1 Query: 567 KASSLRAKTQASSV---LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQK 397 + S L A A+S LE + E S C VC + KE VI +C H FC CI + Sbjct: 3 ETSLLEAGASAASTAAALENLQVEAS-------CSVCLEYLKEPVIIECGHNFCKACITR 55 Query: 396 LLRNRQR--RCPSCALSFGANDVKP 328 + +R CP C + ++P Sbjct: 56 WWEDLERDFPCPVCRKTSRYRSLRP 80
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 38.5 bits (88), Expect = 0.020 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCA 358 C +C+ K ++TKC H FC C + R R+ PSCA Sbjct: 253 CIICKSSYKSPIVTKCGHYFCESCALQ----RYRKNPSCA 288
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 38.5 bits (88), Expect = 0.020 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -1 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRN--RQRRCPSCALSFGAND 337 Q +++Y KC +C D + + T C H+FCN CI L ++CP C N Sbjct: 199 QRLADY----KCVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKVHPNK 254 Query: 336 V 334 V Sbjct: 255 V 255
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 38.5 bits (88), Expect = 0.020 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = -1 Query: 546 KTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCP 367 +TQ VL+++ +E+ +C +C+ V+TKC H FC+ C K ++ CP Sbjct: 154 ETQEKEVLKEL-EEIP-----FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMK-VSTNCP 206 Query: 366 SC 361 C Sbjct: 207 IC 208
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 38.1 bits (87), Expect = 0.026 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + V T C HLFC CI +R CPSC Sbjct: 287 ISCQICEHILADPVETTCRHLFCRTCILSCIRVMGCYCPSC 327
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 38.1 bits (87), Expect = 0.026 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = -1 Query: 555 LRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQR 376 + +K + ++LE + + L C +C ++ C H +C DC+ +L Q Sbjct: 1 MNSKVSSPTLLEALSSD------FLACKICLEQLHTPKTLPCLHTYCQDCLAQLDIGGQV 54 Query: 375 RCPSC 361 RCP C Sbjct: 55 RCPEC 59
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 38.1 bits (87), Expect = 0.026 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKL--LRNRQRRCPSC 361 S+ L + +EV+ C +C D ++ V C H+FC C + + + CP C Sbjct: 4 SAPLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLC 56 Query: 360 ALSFGANDVKPIY 322 F +++P++ Sbjct: 57 KKPFKKENIRPVW 69
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 38.1 bits (87), Expect = 0.026 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKL--LRNRQRRCPSC 361 S+ L + +EV+ C +C D ++ V C H+FC C + + + CP C Sbjct: 4 SAPLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLC 56 Query: 360 ALSFGANDVKPIY 322 F +++P++ Sbjct: 57 KKPFKKENIRPVW 69
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 38.1 bits (87), Expect = 0.026 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = -1 Query: 618 DRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVI 439 ++ SKR + L R+ + ++ V+E++ + +C +C + ++ V+ Sbjct: 752 NKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVEELRKGEQG-----ECPICLEALEDAVL 806 Query: 438 TKCYHLFCNDCIQKLLRN-RQRRCPSC 361 T C H C +C+ RN CP C Sbjct: 807 TPCAHRLCRECLLASWRNSTSGLCPVC 833
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 38.1 bits (87), Expect = 0.026 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLR--NRQRRCPSCALSFGANDVK 331 V E L+C VC + KE ++ +C H +C C+ L R + + RCP C ++ Sbjct: 7 VPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSSSSP 66 Query: 330 P 328 P Sbjct: 67 P 67
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 38.1 bits (87), Expect = 0.026 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + V T C H+FC CI + L+ CPSC Sbjct: 291 ISCQICEHILADPVETSCKHVFCRICILRCLKVMGSSCPSC 331
>UB7I3_MOUSE (Q9WUB0) Ubiquitin-conjugating enzyme 7-interacting protein 3| (UbcM4-interacting protein 28) Length = 498 Score = 37.7 bits (86), Expect = 0.034 Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Frame = -1 Query: 663 RSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGI 484 R+R E + + D + R+ + E+L R+ + + Q + L+ H ++ + + Sbjct: 206 RARPETYQIPASYQPDEEERARLAGEEEAL-RQYQQRKQQQQEGNYLQ--HVQLEQRSLV 262 Query: 483 L-----KCGVCRD---RQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L +C VC + VV+ +C H FC +C+Q +RN Q +C Sbjct: 263 LNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVAC 311
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 37.7 bits (86), Expect = 0.034 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +C VC+D ++T C H FC+ CI++ L + +CP C Sbjct: 33 RCHVCKDFYDSPMLTSCNHTFCSLCIRRCL-SVDSKCPLC 71
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 37.7 bits (86), Expect = 0.034 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKP 328 C +C D E V +C H FC +CI ++ + CP C F +++P Sbjct: 16 CPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNLRP 65
>TRI56_HUMAN (Q9BRZ2) Tripartite motif protein 56 (RING finger protein 109)| Length = 755 Score = 37.7 bits (86), Expect = 0.034 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L C +C ++ + C H +C DC+ +L + RCP C Sbjct: 19 LACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGRVRCPEC 59
>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex| combs) Length = 1368 Score = 37.7 bits (86), Expect = 0.034 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 510 QEVSEYRGILKCGVCRDRQKE-VVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFG 346 ++V ++ ++ C +CR + + CYH +C CI K L R CP C S G Sbjct: 24 RDVRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLL-RAVYCPECKASGG 78
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 37.7 bits (86), Expect = 0.034 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -1 Query: 537 ASSVLEKIHQEVSEYRGILK----CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRC 370 +SS +E+I E+ L+ C +C +E V T C H FC CI K +R+ +C Sbjct: 46 SSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKC 105 Query: 369 P 367 P Sbjct: 106 P 106
>RNF26_HUMAN (Q9BY78) RING finger protein 26| Length = 433 Score = 37.7 bits (86), Expect = 0.034 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRN--RQRRCPSC 361 KC +C+D+ K V++ C HL C C + L+R+ R CP C Sbjct: 379 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 421
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 37.7 bits (86), Expect = 0.034 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKL--LRNRQRRCPSC 361 S+ L + +EV+ C +C D ++ V C H+FC C + + + CP C Sbjct: 4 SAPLRSLEEEVT-------CSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLC 56 Query: 360 ALSFGANDVKPIY 322 F +++P++ Sbjct: 57 KKPFTKENIRPVW 69
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 37.7 bits (86), Expect = 0.034 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + V T C H+FC CI + L+ CPSC Sbjct: 290 ISCQICEHILADPVETSCKHVFCRICILRCLKVMGSYCPSC 330
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 37.7 bits (86), Expect = 0.034 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + V T C H+FC CI + L+ CPSC Sbjct: 291 ISCQICEHILADPVETNCKHVFCRVCILRCLKVMGSYCPSC 331
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 37.7 bits (86), Expect = 0.034 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%) Frame = -1 Query: 678 QSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVS 499 + +GR R ELE+D + E++ E +S + L + S E+ + Sbjct: 69 ERSLGRLRGRFEDYDEELEEDEEMEEEEEEE-EEMSHFSLRLESGRADSEDEEERLINLV 127 Query: 498 EYRGILKCGVCRDRQKEVV-ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIY 322 E + C +C+ + IT+C H FC CI + RCP C + + +P+Y Sbjct: 128 ELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF-YYSNRCPKC--NIVVHQTQPLY 184
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 37.4 bits (85), Expect = 0.044 Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 16/101 (15%) Frame = -1 Query: 615 RFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGIL------------KCG 472 R RRI + + R ++ R TQ+SS L + V E I +C Sbjct: 55 RRQNRRIRRRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECS 114 Query: 471 VCRDRQKEV----VITKCYHLFCNDCIQKLLRNRQRRCPSC 361 VC +E V+ KC H+F DCI R+R CP C Sbjct: 115 VCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRS-SCPLC 154
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 37.4 bits (85), Expect = 0.044 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFC 419
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 37.4 bits (85), Expect = 0.044 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C +R K+V I C HL C+ C+ + + CP C Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAWQDSDSQTCPFC 388
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 37.4 bits (85), Expect = 0.044 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQR-RCPSC 361 C VC + + V T+C H+FC CI ++N + CP C Sbjct: 36 CSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYC 75
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 37.4 bits (85), Expect = 0.044 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFC 417
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 37.0 bits (84), Expect = 0.058 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIY 322 C +C + K+V I C HL C+ C+ + + CP C + IY Sbjct: 351 CKICAESNKDVKIEPCGHLLCSCCLAAWQHSDSQTCPFCRCEIKGWEAVSIY 402
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 37.0 bits (84), Expect = 0.058 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Frame = -1 Query: 606 KRRIED-DLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKC 430 KR+IE+ + E K A ASS+ ++ L C +C + K+ V+ C Sbjct: 106 KRKIEEPEPEPKKAKVEEKDASKNASSL-----GAAGDFAEELTCPLCVELFKDPVMVAC 160 Query: 429 YHLFCNDCIQKLLRNRQR-RCPSC 361 H FC CI K + CP C Sbjct: 161 GHNFCRSCIDKAWEGQSSFACPEC 184
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 37.0 bits (84), Expect = 0.058 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -1 Query: 537 ASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCI-----QKLLRNRQRR 373 AS +L + +EV+ C +C + + + C H FC C+ + +L + Sbjct: 2 ASGILVNVKEEVT-------CPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS 54 Query: 372 CPSCALSFGANDVKP 328 CP C +S+ +++P Sbjct: 55 CPVCRISYQPENIRP 69
>RNF19_HUMAN (Q9NV58) RING finger protein 19 (Dorfin) (Double ring-finger| protein) (p38 protein) Length = 838 Score = 37.0 bits (84), Expect = 0.058 Identities = 28/145 (19%), Positives = 63/145 (43%), Gaps = 22/145 (15%) Frame = -1 Query: 693 SMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSR-----------KASSLRA 547 S+ V+ + R+ + L + ++ R + ++ ++ K S Sbjct: 52 SLPSVKKAPKKRRISIGSLFRRKKDNKRKSRELNGGVDGIASIESIHSEMCTDKNSIFST 111 Query: 546 KTQASSVLEKIHQEVSEYRGILKCGVC-----RDRQKEVVITKCYHLFCNDCIQKLLR-- 388 T + + L I +++ ++ ++C +C +DR +++ C+H C DC+++ LR Sbjct: 112 NTSSDNGLTSISKQIGDF---IECPLCLLRHSKDRFPDIMT--CHHRSCVDCLRQYLRIE 166 Query: 387 -NRQR---RCPSCALSFGANDVKPI 325 + R CP C F +D++ I Sbjct: 167 ISESRVNISCPECTERFNPHDIRLI 191
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 36.6 bits (83), Expect = 0.075 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 480 KCGVCRDRQKEV-VITKCYHLFCNDCIQKLLRNRQRRCPSCALSF 349 KC +C DR V + +C H FC C+Q+ +N+ CP C F Sbjct: 102 KCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNK-AECPLCKQPF 145
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 36.6 bits (83), Expect = 0.075 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = -1 Query: 561 SSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNR 382 +SL+ + + S + +V E +C C++ + T C H C DC+ + R + Sbjct: 699 ASLKDRPASGSPFQLFLSKVEE---TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQ 755 Query: 381 QRRCPSCALSFG 346 CP+C G Sbjct: 756 VFSCPACRYDLG 767
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 36.6 bits (83), Expect = 0.075 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 424
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 36.6 bits (83), Expect = 0.075 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 422
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 36.6 bits (83), Expect = 0.075 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%) Frame = -1 Query: 663 RSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGI 484 R R E +E E++ + E+++ S + S RA ++ E++ V E Sbjct: 78 RGRFEDYDEELEEEEEMEEEEEEEEEMSHFSLRLESGRADSEDEE--ERLINLV-ELTPY 134 Query: 483 LKCGVCRDRQKEVV-ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPIY 322 + C +C+ + IT+C H FC CI + RCP C + + +P+Y Sbjct: 135 ILCSICKGYLIDATTITECLHTFCKSCIVRHF-YYSNRCPKC--NIVVHQTQPLY 186
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 36.6 bits (83), Expect = 0.075 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSWQESDGQGCPFC 422
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 36.6 bits (83), Expect = 0.075 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 480 KCGVCRDRQKEV-VITKCYHLFCNDCIQKLLRNRQRRCPSCALSF 349 KC +C DR V + +C H FC C+Q+ +N+ CP C F Sbjct: 103 KCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNK-AECPLCKQPF 146
>RNF19_MOUSE (P50636) RING finger protein 19 (XY body protein) (XYbp)| (Gametogenesis expressed protein GEG-154) (UBCM4-interacting protein 117) (UIP117) Length = 840 Score = 36.2 bits (82), Expect = 0.098 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 11/97 (11%) Frame = -1 Query: 582 ESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVC-----RDRQKEVVITKCYHLF 418 E + K S T + + L I +++ ++ ++C +C +DR +++ C+H Sbjct: 100 EMCADKNSIFSTNTSSDNGLTSISKQIGDF---IECPLCLLRHSKDRFPDIMT--CHHRS 154 Query: 417 CNDCIQKLLR---NRQR---RCPSCALSFGANDVKPI 325 C DC+++ LR + R CP C F +D++ I Sbjct: 155 CVDCLRQYLRIEISESRVNISCPECTERFNPHDIRLI 191
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 36.2 bits (82), Expect = 0.098 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 36.2 bits (82), Expect = 0.098 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (MIAP1) (MIAP-1) Length = 600 Score = 36.2 bits (82), Expect = 0.098 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 1/111 (0%) Frame = -1 Query: 690 MDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIH 511 +D V +K + L E++ + ++ D+ SL A+ +E+ Sbjct: 492 IDTVLAKGNTAATSFRNSLREIDPALYRDIFVQQDIRSLP-------TDDIAALPMEEQL 544 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 +++ E R C VC DR+ +V C HL C DC L R+CP C Sbjct: 545 RKLQEER---MCKVCMDREVSIVFIPCGHLVVCKDCAPSL-----RKCPIC 587
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 36.2 bits (82), Expect = 0.098 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Frame = -1 Query: 519 KIHQEVSEYRGILK---------CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCP 367 ++H+ +S RG L+ C +C + ++ T C HLFC +CI ++ CP Sbjct: 250 RLHRGLSHRRGSLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSK-AECP 308 Query: 366 SCALSF 349 C F Sbjct: 309 LCREKF 314
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 36.2 bits (82), Expect = 0.098 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + K+V I C HL C C+ + + CP C Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAWQESDGQGCPFC 411
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 36.2 bits (82), Expect = 0.098 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Frame = -1 Query: 588 DLESLSRK-----ASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYH 424 DL+SL+R+ S+ + + +E++ Q++ + +C +C + + V+T C H Sbjct: 999 DLDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGNS-KECPICLESADDPVLTPCAH 1057 Query: 423 LFCNDCIQKLLRNRQRRCPSCAL 355 C +C+ R+ PSC L Sbjct: 1058 RMCRECLLTSWRS-----PSCGL 1075
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 36.2 bits (82), Expect = 0.098 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCA 358 C +C+ + ++TKC H FC C + R R+ PSCA Sbjct: 241 CIICKKPYQNPIVTKCGHYFCESCALQ----RYRKNPSCA 276
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 36.2 bits (82), Expect = 0.098 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 KC +CR + V+TKC H FC C + R RC C Sbjct: 261 KCFICRQTFQNPVVTKCRHYFCESCALQHFRTTP-RCYVC 299
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 36.2 bits (82), Expect = 0.098 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 KC +CR + V+TKC H FC C + R RC C Sbjct: 261 KCFICRQSFQNPVVTKCRHYFCESCALQHFRTTP-RCYVC 299
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 36.2 bits (82), Expect = 0.098 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 6/119 (5%) Frame = -1 Query: 663 RSRVEVAGLLVELE---KDRFSKRRIEDDLESLSRKASSL-RAKTQASSVLEKIHQEVSE 496 R E+ GLL+ + K+ + R++ +++ + R + Q S V++ +V Sbjct: 177 RGNYELLGLLIIFQTVFKNVANLRKLWGATKTVQDSGDLIYRFRDQTSDVIDLADPKVLP 236 Query: 495 Y--RGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKPI 325 Y C +C K+ +C H+FC C+ ++ RQ CP C + + P+ Sbjct: 237 YLPEASRTCMLCLSPMKDPSCGECGHVFCWKCVLDWVKERQ-ECPLCRAKMRESQLLPL 294
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 35.8 bits (81), Expect = 0.13 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQK--LLRNRQRRCPSCALSFGA 343 L C +C + KE V T C H FC C+ + ++ CP C + A Sbjct: 11 LSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQA 59
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 35.8 bits (81), Expect = 0.13 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = -1 Query: 483 LKCGVCRDRQKE-VVITKCYHLFCNDCIQ-KLLRNRQRRCPSCALSFGANDVKP 328 L C +C+D + VVI C + +C++CI+ LL + + CP+C NDV P Sbjct: 257 LLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTC----HQNDVSP 306
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 35.8 bits (81), Expect = 0.13 Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 23/108 (21%) Frame = -1 Query: 615 RFS-KRRIEDDLESLSRKASSLRAKTQASSVLEKI------------------HQEVSEY 493 RFS RR +D + L + LR++ SV+ I E E Sbjct: 73 RFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEE 132 Query: 492 RGILKCGVC----RDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + +C VC +D +K +I C HLF DCI L+N CP C Sbjct: 133 KRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQN-NANCPLC 179
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 35.8 bits (81), Expect = 0.13 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = -1 Query: 540 QASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 QAS + ++ Q E +C +C D + ++++ C H FC CI K + R CP C Sbjct: 130 QASMWMGRVKQLTDEE----ECCICMDGKADLILP-CAHSFCQKCIDK-WSGQSRNCPVC 183 Query: 360 ALSFGA 343 + A Sbjct: 184 RIQVTA 189
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 35.8 bits (81), Expect = 0.13 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = -1 Query: 483 LKCGVCRDRQKE-VVITKCYHLFCNDCIQ-KLLRNRQRRCPSCALSFGANDVKP 328 L C +C+D + VVI C + +C++CI+ LL + + CP+C NDV P Sbjct: 258 LLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTC----HQNDVSP 307
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 35.4 bits (80), Expect = 0.17 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDC----IQKLLRNRQRRCPSC 361 C +C++ KE V T C HLFC C ++K + CP C Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLC 56
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 35.4 bits (80), Expect = 0.17 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Frame = -1 Query: 606 KRRIED-DLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKC 430 KR++E+ + E K A A+S+ ++ L C +C + K+ V+ C Sbjct: 107 KRKLEEPEPEPKKAKVEDKDASKTAASL-----GAAGDFAEELTCPLCVELFKDPVMVAC 161 Query: 429 YHLFCNDCIQKLLRNRQR-RCPSC 361 H FC CI K+ + CP C Sbjct: 162 GHNFCRSCIDKVWEGQSSFACPEC 185
>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) Length = 774 Score = 35.4 bits (80), Expect = 0.17 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +S+ + +C C++ V T C H C DC+ + R + CP+C Sbjct: 696 LSKVKEAFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPAC 743
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Frame = -1 Query: 513 HQEVSEYRGILKCGVCRD----RQKEVVITKCYHLFCNDCIQKLLRNRQR--RCPSCA 358 H + R +L+C +C + Q + C H C C++KLL + RCP C+ Sbjct: 9 HLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCS 66
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 35.4 bits (80), Expect = 0.17 Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = -1 Query: 627 LEKDRFSKRRIEDDLESLSRKASSLRA-KTQASSVLEKIHQEVSEY-RGILKCGVCRDRQ 454 +E+ SK+ E +++ +++ + K + + E++ +++ L+C +C + Sbjct: 354 MEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKEEVLSHMNDLLENELQCIICSEYF 413 Query: 453 KEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 E V C H FC+ CI + ++ R+ CP C Sbjct: 414 IEAVTLNCAHSFCSFCINEWMK-RKVECPIC 443
>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (Fragment) Length = 554 Score = 35.4 bits (80), Expect = 0.17 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = -1 Query: 486 ILKCGVCRD-----RQKEVVITKCYHLFCNDCIQKL-LRNRQRRCP 367 +L+CGVC D K + C H C+DC+ +L L R RCP Sbjct: 8 VLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLSRLPLHGRAIRCP 53
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 35.4 bits (80), Expect = 0.17 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -1 Query: 504 VSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +S+ + +C C++ V T C H C DC+ + R + CP+C Sbjct: 704 LSKVKEAFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPAC 751
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 35.4 bits (80), Expect = 0.17 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 9/89 (10%) Frame = -1 Query: 573 SRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKE----VVITKCYHLFCNDC 406 S K+S + K A S + SE +C +C E V IT+C H FC C Sbjct: 826 SPKSSISQDKLDALSANFRDIHSASEQLPSFECAICTTECIEPLSAVSITECLHTFCEPC 885 Query: 405 IQKLLRNRQRR-----CPSCALSFGANDV 334 + + + +Q + CP C + +V Sbjct: 886 LAEYIEFQQNKKLSINCPYCRMPISEANV 914
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 35.4 bits (80), Expect = 0.17 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -1 Query: 489 GILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC--ALSFGANDVK 331 G C VC + ++ V C H+FC+ C+Q+ L+ ++ C C AL+ G V+ Sbjct: 25 GRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVE 79
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 35.4 bits (80), Expect = 0.17 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -1 Query: 489 GILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC--ALSFGANDVK 331 G C VC + ++ V C H+FC+ C+Q+ L+ ++ C C AL+ G V+ Sbjct: 25 GRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVE 79
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -1 Query: 525 LEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + ++ +E E C +CR + V+TKC H FC C K R ++ P C Sbjct: 221 VREVEEEDEEEEVPFACLICRQPFTQPVVTKCGHYFCMGCAAK----RFQKSPKC 271
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Frame = -1 Query: 513 HQEVSEYRGILKCGVCRD----RQKEVVITKCYHLFCNDCIQKLLRNRQR--RCPSCA 358 H + R +L+C +C + Q + C H C C++KLL + RCP C+ Sbjct: 8 HLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCS 65
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 35.4 bits (80), Expect = 0.17 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 KC +C++ K V+T C H FC C K ++ + +C C Sbjct: 198 KCTLCKEDYKSPVVTNCGHYFCGSCFAKDMK-KGTKCFIC 236
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 35.4 bits (80), Expect = 0.17 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -1 Query: 489 GILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC--ALSFGANDVK 331 G C VC + ++ V C H+FC+ C+Q+ L+ ++ C C AL+ G V+ Sbjct: 27 GRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVE 81
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 35.0 bits (79), Expect = 0.22 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRR-----CPSC 361 C +C++ KE V T C HLFC C+ + + CP C Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLC 57
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 35.0 bits (79), Expect = 0.22 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -1 Query: 489 GILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 G C VC + ++ V C H+FC+ C+Q+ L+ ++ C C Sbjct: 25 GRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 67
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 35.0 bits (79), Expect = 0.22 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALS 352 C +C D KE V T C HLFC C L+R+ + S LS Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMC---LIRHMDKASVSGVLS 50
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 35.0 bits (79), Expect = 0.22 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = -1 Query: 486 ILKCGVCRD-----RQKEVVITKCYHLFCNDCIQKL-LRNRQRRCP 367 +L+CGVC D K + C H C+DC+ +L L R RCP Sbjct: 28 VLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCP 73
>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (RING finger protein 46) Length = 574 Score = 35.0 bits (79), Expect = 0.22 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = -1 Query: 486 ILKCGVCRD-----RQKEVVITKCYHLFCNDCIQKL-LRNRQRRCP 367 +L+CGVC D K + C H C+DC+ +L L R RCP Sbjct: 28 VLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCP 73
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 35.0 bits (79), Expect = 0.22 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C K+ +T C H FC CI LRN+ CP C Sbjct: 47 CPICMQIIKDAFLTACGHSFCYMCIITHLRNKS-DCPCC 84
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 35.0 bits (79), Expect = 0.22 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -1 Query: 513 HQEVSEYRGI-LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 H+ SE I +C +CR + V+TKC H FC C + R RC C Sbjct: 243 HEVGSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFR-ATPRCYIC 293
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 35.0 bits (79), Expect = 0.22 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 11/61 (18%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQ------KLLRNRQRR-----CPSCALSFGANDVK 331 C +C D + V+T C H FC +CIQ K+ + ++++ CP C +++ Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKVKKGKKKQKGSFPCPECREMSPQRNLR 75 Query: 330 P 328 P Sbjct: 76 P 76
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 34.7 bits (78), Expect = 0.29 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCI------QKLLRNRQRR 373 S VL I +EV+ C +C + E + C H FC CI + + +R Sbjct: 3 SPVLVDIREEVT-------CPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERS 55 Query: 372 CPSCALSFGANDVKP 328 CP C S+ +++P Sbjct: 56 CPVCQTSYQPGNLRP 70
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 34.7 bits (78), Expect = 0.29 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L C +C +R K + C H FC C+Q + + CP C Sbjct: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVC 63
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 34.7 bits (78), Expect = 0.29 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L C +C +R K + C H FC C+Q + + CP C Sbjct: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVC 63
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 34.7 bits (78), Expect = 0.29 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 L+C +C + E V C H FC+ CI + ++ R+ CP C Sbjct: 401 LQCIICSEYFIEAVTLNCAHSFCSYCINEWMK-RKIECPIC 440
>RAD5_YARLI (Q6C2R8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1025 Score = 34.7 bits (78), Expect = 0.29 Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = -1 Query: 594 EDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFC 415 E L+S+ ++ + +T A +I ++ + +C +C + ++ I+KC H+ C Sbjct: 744 ESQLKSMIQQYND-DTQTSACEYSSEIIAQLQDQSAPPECPICAEDVTKLAISKCLHMGC 802 Query: 414 NDCIQKLLR--NRQRRCPSCALSFGANDVKPIY 322 DC+ +R +++ P C + +K I+ Sbjct: 803 VDCLADNVRFQESKKQTPVCCICRQPAALKDIF 835
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 34.7 bits (78), Expect = 0.29 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 KC +C ++ T C H+FC CI + N ++ CP C Sbjct: 326 KCTLCLSTRQHPTATPCGHVFCWSCIMEWC-NEKQECPLC 364
>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2) (TNFR2-TRAF signaling complex protein 1) (IAP homolog C) (Apoptosis inhibitor 2) (API2) Length = 604 Score = 34.7 bits (78), Expect = 0.29 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = -1 Query: 699 RESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESL-SRKASSLRAKTQASSVL 523 RE +D + K + L E E + ++ D++ + + S L + Q L Sbjct: 493 RELIDTILVKGNIAATVFRNSLQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQ----L 548 Query: 522 EKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 ++ +E + C VC D++ +V C HL C DC L R+CP C Sbjct: 549 RRLQEERT-------CKVCMDKEVSIVFIPCGHLVVCKDCAPSL-----RKCPIC 591
>ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M| Length = 310 Score = 34.7 bits (78), Expect = 0.29 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Frame = -1 Query: 534 SSVLEKIHQEV---SEYRGILKCGVCR----DRQKEVVITKCYHLFCNDCIQKLLRNRQR 376 S +L+ IH V ++++ L+C VC D K V+ +C H F DCI ++ Sbjct: 98 SKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHS- 156 Query: 375 RCPSCALSFGA 343 CP C + G+ Sbjct: 157 TCPLCRNTVGS 167
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 34.7 bits (78), Expect = 0.29 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSCALSFGANDVKP 328 C +C D + V+T C H FC +CI++ + CP C +++P Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSAQRNLRP 67
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 34.7 bits (78), Expect = 0.29 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFG 346 C VC D E I +C H +C CI+ L N +CP C G Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESHL-NINEKCPLCRAHTG 50
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 34.7 bits (78), Expect = 0.29 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C + + ++TKC H FC C K + + +CP C Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQ-KSSKCPIC 278
>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (MIAP2) (MIAP-2) Length = 612 Score = 34.3 bits (77), Expect = 0.37 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 2/115 (1%) Frame = -1 Query: 699 RESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESL-SRKASSLRAKTQASSVL 523 RE +D V K + L E++ + +E +++ + + S L + Q L Sbjct: 501 RELIDTVLVKGNAAANIFKNSLKEIDSTLYENLFVEKNMKYIPTEDVSGLSLEEQ----L 556 Query: 522 EKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 ++ +E + C VC DR+ +V C HL C +C L R+CP C Sbjct: 557 RRLQEERT-------CKVCMDREVSIVFIPCGHLVVCQECAPSL-----RKCPIC 599
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 34.3 bits (77), Expect = 0.37 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L C +C DR + + C H FC C+Q + ++ CP C Sbjct: 20 LVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 34.3 bits (77), Expect = 0.37 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L C +C DR + + C H FC C+Q + ++ CP C Sbjct: 20 LVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVC 62
>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF| receptor) Length = 643 Score = 34.3 bits (77), Expect = 0.37 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAND 337 C +C D + C HLF N C++ L + CP+C +S D Sbjct: 341 CAICWDSMQAARKLPCGHLFHNSCLRSWL-EQDTSCPTCRMSLNIAD 386
>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)| (AMF receptor) (gp78) Length = 643 Score = 34.3 bits (77), Expect = 0.37 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAND 337 C +C D + C HLF N C++ L + CP+C +S D Sbjct: 341 CAICWDSMQAARKLPCGHLFHNSCLRSWL-EQDTSCPTCRMSLNIAD 386
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 34.3 bits (77), Expect = 0.37 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + ++ V+ H+FC+ CI L+N +CP+C Sbjct: 16 ITCHICLGKVRQPVVCTNNHVFCSICIDLWLKNNS-QCPAC 55
>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)| Length = 249 Score = 34.3 bits (77), Expect = 0.37 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 522 EKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSCAL 355 E + Q+VSE C VC DR+K V C HL C +C RRC C + Sbjct: 193 EPLTQQVSE------CKVCFDREKSVCFMPCRHLAVCTEC--------SRRCKRCCV 235
>PIAP_PIG (O62640) Putative inhibitor of apoptosis| Length = 358 Score = 34.3 bits (77), Expect = 0.37 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 C VC D++ +V C HL C DC L R+CP C Sbjct: 311 CKVCMDKEVSIVFIPCGHLVVCKDCAPSL-----RKCPIC 345
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 34.3 bits (77), Expect = 0.37 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +C +CR + V T+C H FC C + +R R+C C Sbjct: 157 RCVLCRGHYRAPVRTRCGHYFCGGCFARRVR-ETRQCAVC 195
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 33.9 bits (76), Expect = 0.49 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 7/64 (10%) Frame = -1 Query: 507 EVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQK-------LLRNRQRRCPSCALSF 349 E S + +C +C + + + C HLFC CIQ+ RCP C L F Sbjct: 245 ENSLFHPTFQCSICLENKNPSALF-CGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEF 303 Query: 348 GAND 337 D Sbjct: 304 QPRD 307
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 33.9 bits (76), Expect = 0.49 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQ--RRCPSC 361 C +C D + V+T C H FC +CI++ + CP C Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPEC 56
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 33.9 bits (76), Expect = 0.49 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC--ALSFGANDVK 331 C VC + ++ V C H+FC+ C+Q+ L+ ++ C C AL+ G V+ Sbjct: 30 CPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVE 80
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 33.9 bits (76), Expect = 0.49 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -1 Query: 510 QEVSEYRGILKCGVCRDRQKEV-VITKCYHLFCNDCIQKLLRNRQRRCPSC 361 Q V + +C +C ++ ++ + C L C CI++ L ++ +CP C Sbjct: 4 QSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHC 54
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 33.9 bits (76), Expect = 0.49 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDC-IQKLLRNRQRRCPSCALSFG 346 C +CR + V+T+C H FC+ C I++ +N +C +C G Sbjct: 264 CLICRKAFTDPVVTRCAHYFCSSCAIKRFAKN--SKCFACGQQTG 306
>ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory protein (Leucine| repeat protein) (VSG expression site-associated protein F14.9) Length = 630 Score = 33.9 bits (76), Expect = 0.49 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = -1 Query: 477 CGVCRDRQKE--VVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFG 346 C VCR+ E V + C H+FC C+ ++ RCPSC G Sbjct: 10 CAVCREPWAEGAVELLPCRHVFCTACVV-----QRWRCPSCQRRIG 50
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 33.9 bits (76), Expect = 0.49 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L C +C DR + + C H FC C+Q + ++ CP C Sbjct: 20 LVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVC 62
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 33.9 bits (76), Expect = 0.49 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Frame = -1 Query: 519 KIHQEVSEYRGILK---------CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCP 367 ++H+ +S R L+ C +C + ++ T C HLFC +CI ++ CP Sbjct: 250 RLHRGLSHRRASLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSK-AECP 308 Query: 366 SCALSF 349 C F Sbjct: 309 LCREKF 314
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 33.9 bits (76), Expect = 0.49 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + ++ VI H+FC+ CI L+N +CP+C Sbjct: 16 ITCHICLGKVRQPVICINNHVFCSICIDLWLKNNS-QCPAC 55
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 33.9 bits (76), Expect = 0.49 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + C +C + ++ VI H+FC+ CI L+N +CP+C Sbjct: 16 ITCHICLGKVRQPVICINNHVFCSICIDLWLKNNS-QCPAC 55
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 33.9 bits (76), Expect = 0.49 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -1 Query: 510 QEVSEYRGILKCGVCRDRQKEV-VITKCYHLFCNDCIQKLLRNRQRRCPSC 361 Q V + +C +C ++ ++ + C L C CI++ L ++ +CP C Sbjct: 4 QSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHC 54
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 33.9 bits (76), Expect = 0.49 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 8/58 (13%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCI--------QKLLRNRQRRCPSCALSFGANDVKP 328 C +C V C H +C+ CI QK LR CP C F + ++P Sbjct: 16 CSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSLRP 73
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 33.5 bits (75), Expect = 0.64 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C VC + ++ V C H+FC+ C+Q+ L+ ++ C C Sbjct: 30 CPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVC 68
>RAD5_SCHPO (P36607) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1133 Score = 33.5 bits (75), Expect = 0.64 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Frame = -1 Query: 486 ILKCGVCRDRQ-KEVVITKCYHLFCNDCIQKLLRNRQRR------CPSCALSFGANDV-K 331 I +C +C + + ++ C H C DC+ + ++ ++RR C +C F DV K Sbjct: 874 ITECPICCNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQPFNEQDVYK 933 Query: 330 PIYI 319 P ++ Sbjct: 934 PFFV 937
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 33.5 bits (75), Expect = 0.64 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYH-LFCNDCIQKLLRNRQRRCPSC 361 +C VC + + + C H LFC DC ++ + CP+C Sbjct: 433 ECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPAC 473
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 33.5 bits (75), Expect = 0.64 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -1 Query: 519 KIHQEVSEYRGILKCGVCRDR-QKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFG 346 ++ +E E C +C Q + KC H FC CI + L+ + + CP C +G Sbjct: 152 RLREEAEEQEST--CPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACPMCGRFYG 207
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 33.5 bits (75), Expect = 0.64 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L+C +C + KE ++ +C H +C C+ L + + RCP C Sbjct: 14 LQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVC 56
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 33.5 bits (75), Expect = 0.64 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 11/61 (18%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQ--------KLLRNRQR---RCPSCALSFGANDVK 331 C +C D + V+T C H FC +CIQ K + +Q+ CP C +++ Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKGKKGKKKQKGSFPCPECREMSPQRNLR 75 Query: 330 P 328 P Sbjct: 76 P 76
>TRC8_DROME (Q7KRW1) Protein TRC8 homolog| Length = 809 Score = 33.1 bits (74), Expect = 0.83 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C +C IT+C H F C++K L Q RCP C Sbjct: 621 CAICYQEMYSAKITRCRHFFHGVCLRKWL-YVQDRCPLC 658
>CLPB1_SYNY3 (P74459) Chaperone clpB 1| Length = 898 Score = 33.1 bits (74), Expect = 0.83 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -1 Query: 696 ESMDQVQSKVGRSRVEVAGLLVELEKDRFSKRRIEDDLESLS----RKASSLRAKTQASS 529 +++D V R ++E+ VELE +R ++ +E LS K L A + Sbjct: 393 KAIDLVDEAAARLKMEITSKPVELED--IDRRLMQLQMEKLSLEGEEKRPGLGADKSSKE 450 Query: 528 VLEKIHQEVSEYRG 487 LEKI QE++E G Sbjct: 451 RLEKIQQEITELEG 464
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 33.1 bits (74), Expect = 0.83 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -1 Query: 537 ASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVIT-KCYHLFCNDCIQKLLRNRQRRCPSC 361 A+++ + Q+ E + +C VC D ++ + HL CN C QKL CP+C Sbjct: 49 AAAITGPLSQQHQELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKL-----SCCPTC 103 Query: 360 ALS 352 S Sbjct: 104 RAS 106
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 33.1 bits (74), Expect = 0.83 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLR----NRQRRCPSC 361 C +C + ++ + ++C+H FC C+ + + CPSC Sbjct: 609 CKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSC 651
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 33.1 bits (74), Expect = 0.83 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -1 Query: 477 CGVCRDR-QKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFG 346 C +C Q + KC H FC CI + L+ + + CP C +G Sbjct: 164 CPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACPMCGRFYG 207
>BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (HIAP2) (HIAP-2) (C-IAP1) (TNFR2-TRAF signaling complex protein 2) (IAP homolog B) Length = 618 Score = 33.1 bits (74), Expect = 0.83 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 C VC D++ VV C HL C +C L R+CP C Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSL-----RKCPIC 605
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 33.1 bits (74), Expect = 0.83 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L+C +C + KE ++ +C H +C C+ L + + RCP C Sbjct: 14 LQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMC 56
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 33.1 bits (74), Expect = 0.83 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLL--RNRQRRCPSC 361 L+C +C + KE ++ +C H +C C+ L + + RCP C Sbjct: 14 LQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMC 56
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 33.1 bits (74), Expect = 0.83 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Frame = -1 Query: 540 QASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQ------KLLRNRQ 379 +A + K+ +E + C +C D + V+T C H FC CIQ + + R+ Sbjct: 2 EAVELARKLQEEAT-------CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRR 54 Query: 378 RR-----CPSC 361 +R CP C Sbjct: 55 KRKGSFPCPEC 65
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 33.1 bits (74), Expect = 0.83 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = -1 Query: 537 ASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRN-----RQRR 373 AS ++ + +EV+ C VC + + V C H FC CI + + Sbjct: 2 ASQFMKNLKEEVT-------CPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFI 54 Query: 372 CPSCALSFGANDVKP 328 CP C +S+ ++++P Sbjct: 55 CPVCRISYQFSNLRP 69
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 32.7 bits (73), Expect = 1.1 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCP 367 L+C +C +E + T C H+FC C+ R+RRCP Sbjct: 16 LECKLCGQVLEEPLCTPCGHVFCASCLLP-WAVRRRRCP 53
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain| associated with RING and Traf domains protein 1) (Malignant 62) (RING finger protein 83) Length = 470 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -1 Query: 483 LKCGVCRDRQKEVV-ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKP 328 L C +C +E V ++ C H FC+ C+Q+ L +CP L + P Sbjct: 16 LLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYP 68
>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24| Length = 405 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -1 Query: 477 CGVCRDR-QKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCA 358 C +CR V+T+C H FC C K R R+ PSCA Sbjct: 310 CIICRGPYSNSPVVTRCGHYFCEACALK----RYRKDPSCA 346
>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell| apoptosis protein) Length = 611 Score = 32.7 bits (73), Expect = 1.1 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 C VC D++ +V C HL C +C L R+CP C Sbjct: 564 CKVCMDKEVSIVFIPCGHLVVCKECAPSL-----RKCPIC 598
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNR-QRRCPSC 361 L C VC D ++ V +C H FC C+ + + CP C Sbjct: 19 LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVC 60
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%) Frame = -1 Query: 483 LKCGVCRDRQKEV-----VITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAN 340 L+C +C +E ++T CYH+F +CI + L + + CP C + N Sbjct: 112 LECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLES-NKTCPVCRRNLDPN 163
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 32.7 bits (73), Expect = 1.1 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C VC DR +V C HL C +C L + CP C Sbjct: 252 CKVCLDRAVSIVFVPCGHLVCAECAPGL-----QLCPIC 285
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C VC + V + C HLFC CI + CP+C Sbjct: 296 CQVCDHLLSDPVQSPCRHLFCRLCIIRYTHALGPNCPTC 334
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = -1 Query: 510 QEVSEYRGILKCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSCALSFGANDV 334 ++V I +C VC D++ V+ C H+ C +C N ++C C + Sbjct: 855 EQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENC-----ANLMKKCVQCR---AVVER 906 Query: 333 KPIYI*CCGG 304 + +I CCGG Sbjct: 907 RVPFIMCCGG 916
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 32.3 bits (72), Expect = 1.4 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = -1 Query: 522 EKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 + +++ + +C VC +RQ++ V+ C H FC C+Q ++CP+C Sbjct: 223 DNLNENADDIEEKYECKVCLERQRDAVLMPCRH-FC-VCVQCYF-GLDQKCPTC 273
>CIP8_ARATH (Q9SPL2) Ubiquitin-protein ligase CIP8 (EC 6.3.2.-)| (COP1-interacting protein 8) Length = 334 Score = 32.3 bits (72), Expect = 1.4 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%) Frame = -1 Query: 549 AKTQASSVLEKIHQEVSEYRGILKCGVCRDRQ------KEVVITKCYHLFCNDCIQKLLR 388 A A LE SE ++ C VC+D K++ CYH DCI L Sbjct: 233 AAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYH---GDCIVPWLG 289 Query: 387 NRQRRCPSCALSFGANDVK 331 R CP C +D + Sbjct: 290 TR-NSCPVCRFQLETDDAE 307
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 9/64 (14%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQR---------RCPSCALSFGANDVK 331 L C +C + + C H FC C++ LL R +CP+C A V Sbjct: 8 LTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKETSATGVN 67 Query: 330 PIYI 319 + + Sbjct: 68 SLQV 71
>ACRBP_CAVPO (Q60485) Acrosin-binding protein precursor (Proacrosin-binding| protein sp32) Length = 543 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/102 (18%), Positives = 48/102 (47%), Gaps = 4/102 (3%) Frame = -1 Query: 696 ESMDQVQSKVGRSRVEVAG----LLVELEKDRFSKRRIEDDLESLSRKASSLRAKTQASS 529 +S++ + +VGR+ + + + L D S D++S +++ Q++ Sbjct: 237 QSVEDMLGRVGRAGLRIGSEPKPQSLSLSSDPHSFTARVRDVDSAPMMIENIQELIQSAQ 296 Query: 528 VLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCI 403 +E++++E + +R + + KE ++ CY + N C+ Sbjct: 297 EMEEMYEEDAYWRSQNHGSLLQLPHKEALLVLCYSIVMNSCV 338
>UNK_DROME (Q86B79) Protein unkempt| Length = 599 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 3/90 (3%) Frame = -1 Query: 621 KDRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQ--EVSEYRGILKCGVCRDRQKE 448 K+R+ +I+ +L + R S + K S + + + +V KC C + + Sbjct: 506 KERYDLAQIQLNLPAELRDLSIQKLKQLQSKLRTDLEEVDKVLYLENAKKCMKCEENNRT 565 Query: 447 VVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 V + C HL CN C + + CP C Sbjct: 566 VTLEPCNHLSICNTCAESV-----TECPYC 590
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 32.3 bits (72), Expect = 1.4 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 441 ITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKP 328 I +C H FC+ C+ LR ++R CP C + N+ KP Sbjct: 276 IVECLHSFCHSCLINHLR-KERFCPRCEMVI--NNAKP 310
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = -1 Query: 549 AKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRN-RQRR 373 A+T ++ + E C VC + + ++ C HL C C+ K + R+ Sbjct: 2 AETMKDITMKNDESQEEEIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESH 61 Query: 372 CPSC 361 CP C Sbjct: 62 CPIC 65 Score = 31.6 bits (70), Expect = 2.4 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -1 Query: 519 KIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQR-RCPSC 361 K+ +++S + L C C++ V+ C H++C C+ + ++ +C C Sbjct: 180 KVSKQIS--KDDLLCSACKELLVRPVVLNCGHVYCEGCVVDMAEESEKIKCQEC 231
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 14/90 (15%) Frame = -1 Query: 588 DLESLSRKAS----SLRAKTQASSVLEKIHQEVSEYRGI--LKCGVCRDRQKEV---VIT 436 +L+SL R S + +K + ++++++ + + + L+C +C ++ + T Sbjct: 871 ELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFT 930 Query: 435 KCYHLFCNDCIQKLL-----RNRQRRCPSC 361 +C H FC C+ + + +N +CP+C Sbjct: 931 ECGHSFCEKCLFEYIEFQNSKNLGLKCPNC 960
>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24| Length = 232 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = -1 Query: 531 SVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +V E+ + S+ + +C +C V T+C HLFC C RN ++ P+C Sbjct: 154 TVTEQQKPDKSKEQVPYRCVLCSKDYTLPVKTECNHLFCQKCFMNRYRNLKK--PNC 208
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 32.0 bits (71), Expect = 1.9 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 510 QEVSEYRGI-LKCGVCRDRQKEVVITKCYHLFCNDC 406 +EV E I KC +C+ K + T+C H+FC C Sbjct: 144 KEVKEKEDIPFKCVLCKSDYKSPIKTECGHIFCKAC 179
>ATL2N_ARATH (O22255) RING-H2 finger protein ATL2N| Length = 227 Score = 32.0 bits (71), Expect = 1.9 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 10/96 (10%) Frame = -1 Query: 618 DRFSKRRIEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGIL------KCGVCRDR 457 +R +RRI L +LS +S R + +VL+KI V + +C VC Sbjct: 58 NRRIRRRIRSHLRTLS---ASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSE 114 Query: 456 QKEV----VITKCYHLFCNDCIQKLLRNRQRRCPSC 361 +E ++ KC H F DCI R+R CP C Sbjct: 115 FEEEDEGRLLPKCGHSFHVDCIDTWFRSRS-TCPLC 149
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 32.0 bits (71), Expect = 1.9 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 Query: 480 KCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 KC CR T+C H FC C+ LL + +C +C Sbjct: 51 KCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTAC 90
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -1 Query: 483 LKCGVCRDRQKEVVITKCYHL-FCNDCIQKLLRNRQRRCPSC 361 L+C VC +RQ++ V+ C H C C L +CP+C Sbjct: 225 LECKVCLERQRDAVLLPCRHFCVCMQCYFAL----DGKCPTC 262
>TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor necrosis factor| type 2 receptor-associated protein 3) Length = 501 Score = 31.6 bits (70), Expect = 2.4 Identities = 10/39 (25%), Positives = 20/39 (51%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSC 361 C CR+ + +C H +C+ C+ +L + + C +C Sbjct: 34 CSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAAC 72
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Frame = -1 Query: 534 SSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLFCNDCIQKLLRNR------QRR 373 S+VL I EV+ C +C + E + C H FC CI N + Sbjct: 3 STVLVDIRDEVT-------CPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSS 55 Query: 372 CPSCALSFGANDVKP 328 CP C S+ +++P Sbjct: 56 CPVCRTSYQPGNLRP 70
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 31.6 bits (70), Expect = 2.4 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = -1 Query: 477 CGVCRDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGAN 340 C +C + V C H FC CI+ ++N C C F ++ Sbjct: 5 CTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRRPFDSS 50
>TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-rich motif| associated to RING and Traf domains protein 1) Length = 470 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 483 LKCGVC-RDRQKEVVITKCYHLFCNDCIQKLLRNRQRRCPSCALSFGANDVKP 328 L C +C + + V ++ C H +C++C+Q+ L +CP L + P Sbjct: 16 LLCPLCGKPMRDSVEVSTCGHRYCDNCLQEFLSEGVFKCPEDQLPLDYAKIYP 68
>YT44_CAEEL (Q11072) Hypothetical RING finger protein B0416.4 in chromosome X| Length = 218 Score = 31.6 bits (70), Expect = 2.4 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Frame = -1 Query: 555 LRAKTQASSVLEKIHQEVSEYRGI----LKCGVCR------DRQKEVVITKCYHLFCNDC 406 +R + + V EK+ Q+ + + C +C D+ +I C H C C Sbjct: 124 VRDRMKVKDVDEKLLQQYMKKENVEFEWRSCFICTMEYSRTDKNLHPIILNCGHNLCRSC 183 Query: 405 IQKLLRNRQRRCP 367 I KL N +CP Sbjct: 184 INKLTGNGIVKCP 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,444,231 Number of Sequences: 219361 Number of extensions: 2069967 Number of successful extensions: 5677 Number of sequences better than 10.0: 322 Number of HSP's better than 10.0 without gapping: 5440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5656 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
