ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1i16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478793.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
2ref|XM_478792.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
4dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6dbj|AK100426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
7dbj|AK060818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
8gb|AF080436.1|AF080436 Oryza sativa mitogen activated protein ki... 137 5e-29
9gb|AY108534.1| Zea mays PCO137357 mRNA sequence 131 3e-27
10gb|AY109196.1| Zea mays PCO137358 mRNA sequence 107 5e-20
11tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specifi... 46 0.15
12emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chr... 46 0.15
13gb|BT003543.1| Drosophila melanogaster RE04975 full insert cDNA 44 0.59
14emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on ch... 44 0.59
15gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 44 0.59
16ref|NM_164924.1| Drosophila melanogaster CG31716-RG, transcript ... 44 0.59
17ref|NM_164923.1| Drosophila melanogaster CG31716-RE, transcript ... 44 0.59
18ref|NM_164922.1| Drosophila melanogaster CG31716-RD, transcript ... 44 0.59
19ref|NM_164921.1| Drosophila melanogaster CG31716-RC, transcript ... 44 0.59
20ref|NM_164920.1| Drosophila melanogaster CG31716-RB, transcript ... 44 0.59
21ref|NM_164919.1| Drosophila melanogaster CG31716-RA, transcript ... 44 0.59
22gb|AC092237.1|AC092237 Drosophila melanogaster, chromosome 2L, r... 44 0.59
23gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, r... 44 0.59
24gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37... 44 0.59
25emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M1... 42 2.3
26gb|AC118283.5| Homo sapiens BAC clone RP11-1398P2 from 4, comple... 42 2.3
27gb|AC147067.4| Homo sapiens BAC clone RP13-1016M1 from 4, comple... 42 2.3
28emb|AJ328561.1|HSA328561 Homo sapiens genomic sequence surroundi... 42 2.3
29gb|AF196969.3| Homo sapiens chromosome X clone LL0XNC01-30I04 ma... 40 9.2
30gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome... 40 9.2
31ref|XM_870979.1| PREDICTED: Bos taurus similar to SH3 and multip... 40 9.2
32gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, com... 40 9.2
33emb|CR848718.8| Zebrafish DNA sequence from clone DKEY-5N8 in li... 40 9.2
34emb|AL591594.9| Human DNA sequence from clone RP11-424N15 on chr... 40 9.2
35gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 9.2
36emb|AL359077.10| Human DNA sequence from clone RP11-176B4 on chr... 40 9.2
37emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 9.2
38gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 40 9.2
39gb|AC090082.3| Homo sapiens chromosome 8, clone CTD-2294B10, com... 40 9.2
40gb|AC015687.11| Homo sapiens chromosome , clone RP11-18M5, compl... 40 9.2
41emb|BX511160.6| Zebrafish DNA sequence from clone DKEY-238J22 in... 40 9.2
42dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 9.2
43dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 9.2
44emb|AL672129.4| Zebrafish DNA sequence from clone BUSM1-104F18 i... 40 9.2
45gb|AC110033.9| Mus musculus chromosome 1, clone RP23-117O18, com... 40 9.2
46emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8... 40 9.2
47gb|AC108796.10| Mus musculus chromosome 1, clone RP23-349L18, co... 40 9.2
48emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in ... 40 9.2
49emb|AL935307.9| Zebrafish DNA sequence from clone DKEY-63P22, co... 40 9.2
50emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chr... 40 9.2
51emb|AL359682.4|CNS05TF0 Human chromosome 14 DNA sequence BAC C-2... 40 9.2 
>ref|XM_478793.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2129

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                        
Query: 228  gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
            |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 1720 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 1661

                                                                        
Query: 288  agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
            | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 1660 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 1604

                                                                        
Query: 348  gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
            ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 1603 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 1544

                                   
Query: 408  acttcatgctttatgtcgaaccc 430
            ||||||||||| |||||||||||
Sbjct: 1543 acttcatgcttcatgtcgaaccc 1521



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 34   ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
            |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 1920 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 1872



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 594  cctccatcatcagagctgccccctgagtcatgcaaa 629
            |||||||||||||||||||| || ||||| ||||||
Sbjct: 1360 cctccatcatcagagctgcctccggagtcctgcaaa 1325
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>ref|XM_478792.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2576

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                        
Query: 228  gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
            |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 1987 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 1928

                                                                        
Query: 288  agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
            | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 1927 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 1871

                                                                        
Query: 348  gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
            ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 1870 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 1811

                                   
Query: 408  acttcatgctttatgtcgaaccc 430
            ||||||||||| |||||||||||
Sbjct: 1810 acttcatgcttcatgtcgaaccc 1788



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 34   ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
            |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 2187 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 2139



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 594  cctccatcatcagagctgccccctgagtcatgcaaa 629
            |||||||||||||||||||| || ||||| ||||||
Sbjct: 1627 cctccatcatcagagctgcctccggagtcctgcaaa 1592
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                            
Query: 228      gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
                |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 23095177 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 23095118

                                                                            
Query: 288      agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
                | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 23095117 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 23095061

                                                                            
Query: 348      gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
                ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 23095060 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 23095001

                                       
Query: 408      acttcatgctttatgtcgaaccc 430
                ||||||||||| |||||||||||
Sbjct: 23095000 acttcatgcttcatgtcgaaccc 23094978



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 34       ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
                |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 23095377 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 23095329



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 594      cctccatcatcagagctgccccctgagtcatgcaaa 629
                |||||||||||||||||||| || ||||| ||||||
Sbjct: 23094817 cctccatcatcagagctgcctccggagtcctgcaaa 23094782
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                          
Query: 228    gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
              |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 170391 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 170332

                                                                          
Query: 288    agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
              | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 170331 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 170275

                                                                          
Query: 348    gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
              ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 170274 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 170215

                                     
Query: 408    acttcatgctttatgtcgaaccc 430
              ||||||||||| |||||||||||
Sbjct: 170214 acttcatgcttcatgtcgaaccc 170192



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 34     ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
              |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 170591 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 170543



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 594    cctccatcatcagagctgccccctgagtcatgcaaa 629
              |||||||||||||||||||| || ||||| ||||||
Sbjct: 170031 cctccatcatcagagctgcctccggagtcctgcaaa 169996
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1699_E05
          Length = 170666

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                         
Query: 228   gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
             |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 39361 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 39302

                                                                         
Query: 288   agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
             | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 39301 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 39245

                                                                         
Query: 348   gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
             ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 39244 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 39185

                                    
Query: 408   acttcatgctttatgtcgaaccc 430
             ||||||||||| |||||||||||
Sbjct: 39184 acttcatgcttcatgtcgaaccc 39162



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 34    ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
             |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 39561 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 39513



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 594   cctccatcatcagagctgccccctgagtcatgcaaa 629
             |||||||||||||||||||| || ||||| ||||||
Sbjct: 39001 cctccatcatcagagctgcctccggagtcctgcaaa 38966
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>dbj|AK100426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C06, full
            insert sequence
          Length = 2576

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                        
Query: 228  gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
            |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 1987 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 1928

                                                                        
Query: 288  agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
            | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 1927 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 1871

                                                                        
Query: 348  gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
            ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 1870 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 1811

                                   
Query: 408  acttcatgctttatgtcgaaccc 430
            ||||||||||| |||||||||||
Sbjct: 1810 acttcatgcttcatgtcgaaccc 1788



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 34   ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
            |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 2187 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 2139



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 594  cctccatcatcagagctgccccctgagtcatgcaaa 629
            |||||||||||||||||||| || ||||| ||||||
Sbjct: 1627 cctccatcatcagagctgcctccggagtcctgcaaa 1592
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>dbj|AK060818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-A05, full
            insert sequence
          Length = 2129

 Score =  145 bits (73), Expect = 2e-31
 Identities = 171/203 (84%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                        
Query: 228  gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
            |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 1720 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 1661

                                                                        
Query: 288  agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
            | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 1660 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 1604

                                                                        
Query: 348  gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
            ||||||||||| |||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 1603 gatggatgaatagctctccttagatgtgccattttccgtgctttgtatttggccatcttt 1544

                                   
Query: 408  acttcatgctttatgtcgaaccc 430
            ||||||||||| |||||||||||
Sbjct: 1543 acttcatgcttcatgtcgaaccc 1521



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 34   ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
            |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 1920 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 1872



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 594  cctccatcatcagagctgccccctgagtcatgcaaa 629
            |||||||||||||||||||| || ||||| ||||||
Sbjct: 1360 cctccatcatcagagctgcctccggagtcctgcaaa 1325
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>gb|AF080436.1|AF080436 Oryza sativa mitogen activated protein kinase kinase (MEK1) mRNA,
            complete cds
          Length = 2432

 Score =  137 bits (69), Expect = 5e-29
 Identities = 170/203 (83%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                        
Query: 228  gggcttcgctggcaggtcggtacacggaaattgtggtgcttaccaacatggaaagactcc 287
            |||||||||| |||||||||||  ||||||||||| | |||||||| ||| |||||||  
Sbjct: 1974 gggcttcgctcgcaggtcggtatgcggaaattgtgattcttaccaatatgaaaagactgt 1915

                                                                        
Query: 288  agcttgctcagtgtaggcttcgtcctgcttgctccattggtggagttgtcgaagtccagt 347
            | |||| |||||| || |||| |||| ||| |||||||     ||||||| |||||||| 
Sbjct: 1914 aacttgttcagtgaagacttcatcctcctttctccattca---agttgtcaaagtccaga 1858

                                                                        
Query: 348  gatggatgaatggctctcttcaagtgtgccattttccgcgctttgtacttggccatcttc 407
            |||||||||||  ||||| | |  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 1857 gatggatgaatacctctccttagatgtgccattttccgtgctttgtatttggccatcttt 1798

                                   
Query: 408  acttcatgctttatgtcgaaccc 430
            ||||||||||| |||||||||||
Sbjct: 1797 acttcatgcttcatgtcgaaccc 1775



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 34   ttaggggtacagattttgttcttgggaggttcggtggcaactgagctcc 82
            |||||| ||||||||||||||||||||| || | ||||| |||||||||
Sbjct: 2175 ttagggttacagattttgttcttgggagatttgttggcagctgagctcc 2127



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 594  cctccatcatcagagctgccccctgagtcatgcaaa 629
            |||||||||||||||||||| || ||||| ||||||
Sbjct: 1614 cctccatcatcagagctgcctccggagtcctgcaaa 1579
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>gb|AY108534.1| Zea mays PCO137357 mRNA sequence
          Length = 670

 Score =  131 bits (66), Expect = 3e-27
 Identities = 160/189 (84%), Gaps = 3/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 242 ggtcggtacacggaaattgtggtgcttaccaacatggaaagactccagcttgctcagtgt 301
           ||||||||| |||||| |||||| ||| |||| ||||||||| | ||||||| |||||| 
Sbjct: 253 ggtcggtacccggaaactgtggttctttccaatatggaaagattgcagcttgttcagtga 194

                                                                       
Query: 302 aggcttcgtcctgcttgctccattggtggagttgtcgaagtccagtgatggatgaatggc 361
           ||||||| ||||  || |||||||  || | ||||||||||| || |||||||| || ||
Sbjct: 193 aggcttcatcctatttactccatt--tgca-ttgtcgaagtcaagagatggatggatagc 137

                                                                       
Query: 362 tctcttcaagtgtgccattttccgcgctttgtacttggccatcttcacttcatgctttat 421
            ||||| || |||||||||||||| |||||||||||||| ||||| || |||||||| ||
Sbjct: 136 cctctttaactgtgccattttccgtgctttgtacttggcaatctttacctcatgcttcat 77

                    
Query: 422 gtcgaaccc 430
           |||||||||
Sbjct: 76  gtcgaaccc 68



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 22  cgtcgaccgcacttaggggtacagattttgttcttgggaggttcggtggcaactgagctc 81
           ||||||| |||  ||||||||||||||||||||  ||||| || ||||||||||||||||
Sbjct: 479 cgtcgacagcatgtaggggtacagattttgttcgcgggagatttggtggcaactgagctc 420

              
Query: 82  cgg 84
           |||
Sbjct: 419 cgg 417
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>gb|AY109196.1| Zea mays PCO137358 mRNA sequence
          Length = 647

 Score =  107 bits (54), Expect = 5e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttgtcgaagtccagtgatggatgaatggctctcttcaagtgtgccattttccgcgctttg 392
           ||||||||||| || |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 522 ttgtcgaagtcaagagatggatggatagccctcttaaactgtgccattttccgtgctttg 463

                                                 
Query: 393 tacttggccatcttcacttcatgctttatgtcgaaccc 430
           |||||||| ||||| || ||||||||||||||||||||
Sbjct: 462 tacttggcgatctttacctcatgctttatgtcgaaccc 425



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 240 caggtcggtacacggaaattgtggtgcttaccaacatggaaagactccagcttgctcagt 299
           ||||| || |||||||||||||||| ||| |||||||||||||| | ||||||| |||||
Sbjct: 612 caggttggcacacggaaattgtggttctttccaacatggaaagattgcagcttgttcagt 553

                   
Query: 300 gtaggctt 307
           | ||||||
Sbjct: 552 gaaggctt 545



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 481 gctcctggaaagaactgaagcaaagccggtcagaaagacctcttctacccatct 534
           |||| ||||| ||||||||||||||| | | ||||||| ||||||| |||||||
Sbjct: 374 gctcttggaatgaactgaagcaaagctgattagaaagatctcttcttcccatct 321
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>tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specific 6 (GAS6) gene,
            complete cds
          Length = 45840

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 557  gggctccttgtctttgacatgttgctc 583
            ||||||||||||||||| |||||||||
Sbjct: 3311 gggctccttgtctttgaaatgttgctc 3337
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>emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chromosome 13 Contains the
             GAS6 gene for growth arrest-specific 6, six novel genes
             and ten CpG islands, complete sequence
          Length = 170020

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 557   gggctccttgtctttgacatgttgctc 583
             ||||||||||||||||| |||||||||
Sbjct: 94557 gggctccttgtctttgaaatgttgctc 94531
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>gb|BT003543.1| Drosophila melanogaster RE04975 full insert cDNA
          Length = 3635

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1870 gttgctcttttcgagctcctcc 1849
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>emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on chromosome 6 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
             and a novel gene, complete sequence
          Length = 138027

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 489   aaagaactgaagcaaagccggtcaga 514
             |||||||||||||||||| |||||||
Sbjct: 47046 aaagaactgaagcaaagctggtcaga 47021
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 396    ttggccatcttcacttcatgct 417
              ||||||||||||||||||||||
Sbjct: 841501 ttggccatcttcacttcatgct 841480
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>ref|NM_164924.1| Drosophila melanogaster CG31716-RG, transcript variant G (CG31716),
            mRNA
          Length = 3373

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1620 gttgctcttttcgagctcctcc 1599
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>ref|NM_164923.1| Drosophila melanogaster CG31716-RE, transcript variant E (CG31716),
            mRNA
          Length = 3562

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1809 gttgctcttttcgagctcctcc 1788
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>ref|NM_164922.1| Drosophila melanogaster CG31716-RD, transcript variant D (CG31716),
            mRNA
          Length = 3490

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1737 gttgctcttttcgagctcctcc 1716
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>ref|NM_164921.1| Drosophila melanogaster CG31716-RC, transcript variant C (CG31716),
            mRNA
          Length = 3560

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1807 gttgctcttttcgagctcctcc 1786
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>ref|NM_164920.1| Drosophila melanogaster CG31716-RB, transcript variant B (CG31716),
            mRNA
          Length = 3399

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1646 gttgctcttttcgagctcctcc 1625
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>ref|NM_164919.1| Drosophila melanogaster CG31716-RA, transcript variant A (CG31716),
            mRNA
          Length = 3623

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  gttgctcttttcgagctcctcc 598
            ||||||||||||||||||||||
Sbjct: 1870 gttgctcttttcgagctcctcc 1849
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>gb|AC092237.1|AC092237 Drosophila melanogaster, chromosome 2L, region 31C-31D, BAC clone
           BACR30M19, complete sequence
          Length = 154779

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 577 gttgctcttttcgagctcctcc 598
           ||||||||||||||||||||||
Sbjct: 768 gttgctcttttcgagctcctcc 789
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>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones
             DS00953 and BACR48K04, complete sequence
          Length = 161754

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 577   gttgctcttttcgagctcctcc 598
             ||||||||||||||||||||||
Sbjct: 60363 gttgctcttttcgagctcctcc 60342
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>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete
              sequence
          Length = 269102

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 577    gttgctcttttcgagctcctcc 598
              ||||||||||||||||||||||
Sbjct: 162631 gttgctcttttcgagctcctcc 162610
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>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   tggaaagactccagcttgctc 296
             |||||||||||||||||||||
Sbjct: 76154 tggaaagactccagcttgctc 76134
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>gb|AC118283.5| Homo sapiens BAC clone RP11-1398P2 from 4, complete sequence
          Length = 130805

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 500   gcaaagccggtcagaaagacc 520
             |||||||||||||||||||||
Sbjct: 38990 gcaaagccggtcagaaagacc 39010
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>gb|AC147067.4| Homo sapiens BAC clone RP13-1016M1 from 4, complete sequence
          Length = 167744

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 500   gcaaagccggtcagaaagacc 520
             |||||||||||||||||||||
Sbjct: 39910 gcaaagccggtcagaaagacc 39930
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>emb|AJ328561.1|HSA328561 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-PB16R
          Length = 741

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 500 gcaaagccggtcagaaagacc 520
           |||||||||||||||||||||
Sbjct: 668 gcaaagccggtcagaaagacc 648
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>gb|AF196969.3| Homo sapiens chromosome X clone LL0XNC01-30I04 map p11.23, complete
             sequence
          Length = 40403

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tttctggctgtgaacatgca 112
             ||||||||||||||||||||
Sbjct: 10012 tttctggctgtgaacatgca 9993
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>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence
          Length = 187883

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   acttggccatcttcacttca 413
             ||||||||||||||||||||
Sbjct: 70322 acttggccatcttcacttca 70303
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>ref|XM_870979.1| PREDICTED: Bos taurus similar to SH3 and multiple ankyrin repeat
           domains 2 isoform 1 (LOC618649), mRNA
          Length = 4428

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 gggccctttgggctcccggg 155
           ||||||||||||||||||||
Sbjct: 515 gggccctttgggctcccggg 496
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>gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, complete sequence
          Length = 184893

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   ctttgacatgttgctctttt 587
             ||||||||||||||||||||
Sbjct: 51411 ctttgacatgttgctctttt 51430
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>emb|CR848718.8| Zebrafish DNA sequence from clone DKEY-5N8 in linkage group 9, complete
              sequence
          Length = 253450

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    cagtgatggatgaatggctc 363
              ||||||||||||||||||||
Sbjct: 238150 cagtgatggatgaatggctc 238169
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>emb|AL591594.9| Human DNA sequence from clone RP11-424N15 on chromosome 1 Contains the
             5' end of the ADSS gene for adenylosuccinate synthase, the
             5' end of the gene for a novel protein (DKFZp686A0738,
             FLJ23552) and two CpG islands, complete sequence
          Length = 152313

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   gtccagtgatggatgaatgg 360
             ||||||||||||||||||||
Sbjct: 86563 gtccagtgatggatgaatgg 86544
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    tcgagctcctccatcatcag 606
              ||||||||||||||||||||
Sbjct: 869760 tcgagctcctccatcatcag 869779
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>emb|AL359077.10| Human DNA sequence from clone RP11-176B4 on chromosome 9 Contains part of
              a novel protein similar to coactivator-associated arginine
              methyltransferase-1 (CARM1), complete sequence
          Length = 182506

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    gtccagtgatggatgaatgg 360
              ||||||||||||||||||||
Sbjct: 140986 gtccagtgatggatgaatgg 141005
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>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 8/10
          Length = 349136

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   gtggtgcttaccaacatgga 279
             ||||||||||||||||||||
Sbjct: 14842 gtggtgcttaccaacatgga 14823
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>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   atcttcacttcatgctttat 421
             ||||||||||||||||||||
Sbjct: 45982 atcttcacttcatgctttat 45963
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>gb|AC090082.3| Homo sapiens chromosome 8, clone CTD-2294B10, complete sequence
          Length = 99486

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   ggtcagaaagacctcttcta 527
             ||||||||||||||||||||
Sbjct: 96270 ggtcagaaagacctcttcta 96289
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>gb|AC015687.11| Homo sapiens chromosome , clone RP11-18M5, complete sequence
          Length = 188571

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    ggtcagaaagacctcttcta 527
              ||||||||||||||||||||
Sbjct: 107407 ggtcagaaagacctcttcta 107388
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>emb|BX511160.6| Zebrafish DNA sequence from clone DKEY-238J22 in linkage group 5,
             complete sequence
          Length = 72990

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 390   ttgtacttggccatcttcacttcatgct 417
             |||| |||||||||| ||||||||||||
Sbjct: 35020 ttgtccttggccatcctcacttcatgct 35047
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     gtggtgcttaccaacatgga 279
               ||||||||||||||||||||
Sbjct: 2487666 gtggtgcttaccaacatgga 2487647
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 395     cttggccatcttcacttcatgctt 418
               |||||||||||||| |||||||||
Sbjct: 2957970 cttggccatcttcaattcatgctt 2957947
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>emb|AL672129.4| Zebrafish DNA sequence from clone BUSM1-104F18 in linkage group 9,
             complete sequence
          Length = 93533

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   cagtgatggatgaatggctc 363
             ||||||||||||||||||||
Sbjct: 60591 cagtgatggatgaatggctc 60610
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>gb|AC110033.9| Mus musculus chromosome 1, clone RP23-117O18, complete sequence
          Length = 260404

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 568   ctttgacatgttgctctttt 587
             ||||||||||||||||||||
Sbjct: 37399 ctttgacatgttgctctttt 37380
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>emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8L8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166894

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 471   gggcacgatcgctcctggaaagaa 494
             |||||||||| |||||||||||||
Sbjct: 43173 gggcacgatcactcctggaaagaa 43196
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>gb|AC108796.10| Mus musculus chromosome 1, clone RP23-349L18, complete sequence
          Length = 188713

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 568   ctttgacatgttgctctttt 587
             ||||||||||||||||||||
Sbjct: 51918 ctttgacatgttgctctttt 51899
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>emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in linkage group 5, complete
              sequence
          Length = 163866

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 390    ttgtacttggccatcttcacttcatgct 417
              |||| |||||||||| ||||||||||||
Sbjct: 124518 ttgtccttggccatcctcacttcatgct 124491
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>emb|AL935307.9| Zebrafish DNA sequence from clone DKEY-63P22, complete sequence
          Length = 234744

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    cagtgatggatgaatggctc 363
              ||||||||||||||||||||
Sbjct: 137512 cagtgatggatgaatggctc 137493
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>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete
              sequence
          Length = 222709

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    acttggccatcttcacttca 413
              ||||||||||||||||||||
Sbjct: 193374 acttggccatcttcacttca 193393
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>emb|AL359682.4|CNS05TF0 Human chromosome 14 DNA sequence BAC C-2561F5 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 116067

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 471    gggcacgatcgctcctggaaagaa 494
              |||||||||| |||||||||||||
Sbjct: 102648 gggcacgatcactcctggaaagaa 102671


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,262,594
Number of Sequences: 3902068
Number of extensions: 5262594
Number of successful extensions: 82342
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82105
Number of HSP's gapped (non-prelim): 237
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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