Clone Name | rbasd1i15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PANB_BACSU (P52996) 3-methyl-2-oxobutanoate hydroxymethyltransfe... | 31 | 4.1 | 2 | RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor (Germin-like pr... | 30 | 9.2 |
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>PANB_BACSU (P52996) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC| 2.1.2.11) (Ketopantoate hydroxymethyltransferase) Length = 277 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = -2 Query: 508 TIGALVTSFSHEVGSLNPGTPQALLQSCATFAAFSCIMEGLNKQQAAMAHTLGGNALTFA 329 T+G V H ++ G P + + F ++ E K AA+ G +AL Sbjct: 55 TVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAAAIVQESGADALKLE 114 Query: 328 HGKG 317 G+G Sbjct: 115 GGEG 118
>RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor (Germin-like protein)| Length = 217 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -2 Query: 439 LLQSCATFAAFSCIMEGLNKQQAAMAHTLGGNALTFAHGKGGVLPPFTLP 290 L++ AT F ++ G N Q+ +TLG + + GG+ PP T P Sbjct: 61 LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHP 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,677,996 Number of Sequences: 219361 Number of extensions: 2031203 Number of successful extensions: 4796 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4670 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4795 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)