Clone Information

BLAST Search Result

Clone Name	rbasd1i14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PNS1_NEUCR (Q870V7) Protein PNS1	43	8e-04
2	34KD_MYCTU (P65637) 34 kDa antigenic protein homolog	39	0.015
3	34KD_MYCBO (P65638) 34 kDa antigenic protein homolog	39	0.015
4	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	37	0.057
5	Y2590_MYCBO (P59983) Hypothetical protein Mb2590	37	0.074
6	Y2560_MYCTU (Q50738) Hypothetical protein Rv2560/MT2637	37	0.074
7	TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containin...	36	0.13
8	EWS_MOUSE (Q61545) RNA-binding protein EWS	35	0.17
9	TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containin...	35	0.22
10	EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing...	35	0.28
11	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	35	0.28
12	PMP13_CHLPN (Q9Z896) Probable outer membrane protein pmp13 precu...	33	0.63
13	Y2118_MYCBO (P64940) Hypothetical protein Mb2118c	33	0.82
14	Y2091_MYCTU (P64939) Hypothetical protein Rv2091c/MT2152	33	0.82
15	YN18_YEAST (P53836) Hypothetical 118.3 kDa protein in ERG24-MET2...	33	0.82
16	OPSD_LOLFO (P24603) Rhodopsin	33	1.1
17	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	33	1.1
18	OPSD_SEPOF (O16005) Rhodopsin	33	1.1
19	OPSD_LOLSU (Q17094) Rhodopsin (Fragment)	33	1.1
20	BRC4_DROME (Q24206) Broad-complex core-protein isoform 6	33	1.1
21	UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000	32	1.4
22	SGP3_CHRVI (O52055) Sulfur globule protein CV3 precursor	32	1.4
23	UVI15_SCHPO (P40388) UV-induced protein uvi15	32	1.8
24	KIN25_CAEEL (Q10925) Probable tyrosine-protein kinase kin-25 (EC...	32	1.8
25	GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10...	32	2.4
26	MGAT2_HUMAN (Q10469) Alpha-1,6-mannosyl-glycoprotein 2-beta-N-ac...	32	2.4
27	POLG_HCVTR (Q81487) Genome polyprotein [Contains: Core protein p...	32	2.4
28	ZCHC2_HUMAN (Q9C0B9) Zinc finger CCHC domain-containing protein ...	32	2.4
29	34KD_MYCPA (Q04959) 34 kDa antigenic protein	31	3.1
30	SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequ...	31	3.1
31	SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequ...	31	3.1
32	CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP ...	31	3.1
33	YV59_CAEEL (P50439) Hypothetical protein F53A9.9	31	4.1
34	NKX25_RAT (O35767) Homeobox protein Nkx-2.5 (Homeobox protein NK...	31	4.1
35	SSBP3_CHICK (Q98948) Single-stranded DNA-binding protein 3 (Sequ...	31	4.1
36	GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated ...	31	4.1
37	OPSD_TODPA (P31356) Rhodopsin	31	4.1
38	DHN3_PEA (P28641) Dehydrin DHN3	31	4.1
39	ANX11_RABIT (P33477) Annexin A11 (Annexin XI) (Calcyclin-associa...	31	4.1
40	CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor	31	4.1
41	YIPF5_RAT (Q5XID0) Protein YIPF5 (YIP1 domain family member 5) (...	30	5.3
42	RPOB_LACPL (Q88XZ3) DNA-directed RNA polymerase beta chain (EC 2...	30	5.3
43	ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/...	30	5.3
44	HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-l...	30	5.3
45	ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/...	30	5.3
46	HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-l...	30	5.3
47	YE9A_SCHPO (O13772) Hypothetical proline/serine-rich protein C17...	30	7.0
48	SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB) (He...	30	7.0
49	CH18_DROSU (P24514) Chorion protein S18	30	7.0
50	SPC3_STRPU (P16537) SPEC3 protein	30	7.0
51	BRO1_DEBHA (Q6BRL3) Vacuolar protein-sorting protein BRO1 (BRO d...	30	7.0
52	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	30	9.1
53	CNC_DROME (P20482) Segmentation protein cap'n'collar	30	9.1
54	RPOB_LACSS (Q38UQ2) DNA-directed RNA polymerase beta chain (EC 2...	30	9.1
55	RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)	30	9.1
56	MAML1_HUMAN (Q92585) Mastermind-like protein 1 (Mam-1)	30	9.1
57	ANXA7_XENLA (Q92125) Annexin A7 (Annexin VII) (Synexin)	30	9.1
58	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	30	9.1
59	PSS_MYCLE (Q9ZBM2) CDP-diacylglycerol--serine O-phosphatidyltran...	30	9.1
60	EOMES_XENLA (P79944) Eomesodermin	30	9.1
61	RPOB3_ENTFC (Q8GCR5) DNA-directed RNA polymerase beta chain (EC ...	30	9.1
62	NKX25_HUMAN (P52952) Homeobox protein Nkx-2.5 (Homeobox protein ...	30	9.1
63	AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathri...	30	9.1
64	SPRR3_RABIT (Q28658) Small proline-rich protein 3 (Cornifin beta)	30	9.1
65	RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif p...	30	9.1
66	RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif p...	30	9.1
67	RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif p...	30	9.1
68	RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif p...	30	9.1

>PNS1_NEUCR (Q870V7) Protein PNS1|
          Length = 554

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = -3

Query: 502 YGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATN----- 338
           YG Q       YGY G P    YGN Y   GY  AP  G P  G    ++PP T+     
Sbjct: 39  YGQQP-----QYGYGGGPPPQQYGNGYGDGGY--APPQGPPPNG----SKPPPTDGYGGP 87

Query: 337 PPSYDQ 320
           PPSYD+
Sbjct: 88  PPSYDE 93

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>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
 Frame = -3

Query: 502 YGDQSAQNNANY---GYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNPP 332
           YG Q AQ  A     G Q +P  P YG+ Y   GY+++P+  Q G   +GYT  P   PP
Sbjct: 191 YGQQGAQQAAGLQSPGPQQSPQPPGYGSQY--GGYSSSPS--QSG---SGYTAQPPAQPP 243

Query: 331 SYDQSXXXXXXXXXXXXXXXXXXXXAKGVSPQPATAAGYGGQ 206
           +   S                        SP P  +AG G Q
Sbjct: 244 AQSGS-------QQSHQGPSTPPTGFPSFSPPPPVSAGTGSQ 278

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>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
 Frame = -3

Query: 502 YGDQSAQNNANY---GYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNPP 332
           YG Q AQ  A     G Q +P  P YG+ Y   GY+++P+  Q G   +GYT  P   PP
Sbjct: 191 YGQQGAQQAAGLQSPGPQQSPQPPGYGSQY--GGYSSSPS--QSG---SGYTAQPPAQPP 243

Query: 331 SYDQSXXXXXXXXXXXXXXXXXXXXAKGVSPQPATAAGYGGQ 206
           +   S                        SP P  +AG G Q
Sbjct: 244 AQSGS-------QQSHQGPSTPPTGFPSFSPPPPVSAGTGSQ 278

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>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYG--QAGYTQPPA 344
           +S P YG Q A ++ +  Y  +    +YG   PQSG      S QP YG  Q  Y Q  +
Sbjct: 95  SSYPGYGQQPAPSSTSGSYGSSSQSSSYGQ--PQSG----SYSQQPSYGGQQQSYGQQQS 148

Query: 343 TNPP 332
            NPP
Sbjct: 149 YNPP 152

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>Y2590_MYCBO (P59983) Hypothetical protein Mb2590|
          Length = 325

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 20/66 (30%)
 Frame = -3

Query: 463 YQGAPADPNYGN----AYPQSGYAAAPTSGQPGYGQA----------------GYTQPPA 344
           + G PADP  GN    +YP  GY A P    PGYG                  GY  PP 
Sbjct: 7   HPGNPADPQGGNQGAGSYPPPGYGAPPPP--PGYGPPPGTYLPPGYNAPPPPPGYGPPPG 64

Query: 343 TNPPSY 326
             PP Y
Sbjct: 65  PPPPGY 70

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>Y2560_MYCTU (Q50738) Hypothetical protein Rv2560/MT2637|
          Length = 325

 Score = 36.6 bits (83), Expect = 0.074
 Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 20/66 (30%)
 Frame = -3

Query: 463 YQGAPADPNYGN----AYPQSGYAAAPTSGQPGYGQA----------------GYTQPPA 344
           + G PADP  GN    +YP  GY A P    PGYG                  GY  PP 
Sbjct: 7   HPGNPADPQGGNQGAGSYPPPGYGAPPPP--PGYGPPPGTYLPPGYNAPPPPPGYGPPPG 64

Query: 343 TNPPSY 326
             PP Y
Sbjct: 65  PPPPGY 70

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>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein homolog)
          Length = 311

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPNYGN-AYPQSGYAAAPTSGQPGYGQ-AGYTQP-P 347
           ++ P Y D+      N  Y G P    YG  +    GY A P   QPGYG  AGY QP P
Sbjct: 5   SAPPPYEDR------NPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP 58

Query: 346 ATNP 335
            T+P
Sbjct: 59  PTHP 62

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>EWS_MOUSE (Q61545) RNA-binding protein EWS|
          Length = 655

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 31/106 (29%), Positives = 36/106 (33%), Gaps = 3/106 (2%)
 Frame = -3

Query: 505 AYGDQSAQNNANYGYQGAPADPNYGNAYPQSGY---AAAPTSGQPGYGQAGYTQPPATNP 335
           AYG QS      YG  G P D +Y  A   + Y   A A + GQP  G +  T P A + 
Sbjct: 35  AYGQQS------YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQ 88

Query: 334 PSYDQSXXXXXXXXXXXXXXXXXXXXAKGVSPQPATAAGYGGQWTA 197
           P                               QPA    YG Q TA
Sbjct: 89  PVQGYGTGAYDSTTATVTTTQASYAAQSAYGTQPAYPT-YGQQPTA 133



 Score = 30.8 bits (68), Expect = 4.1
 Identities = 32/94 (34%), Positives = 37/94 (39%), Gaps = 31/94 (32%)
 Frame = -3

Query: 514 SQPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPT----------SGQP----- 380
           +Q +Y  QSA     YG Q  PA P YG    Q   A APT          + QP     
Sbjct: 108 TQASYAAQSA-----YGTQ--PAYPTYG----QQPTATAPTRPQDGNKPAETSQPQSSTG 156

Query: 379 -------GYGQAGYTQP---------PATNPPSY 326
                  GYGQ+ Y+ P         P T PPSY
Sbjct: 157 GYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSY 190

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>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein) (Responsive to centrifugal force and
           shear stress gene 1 protein)
          Length = 309

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -3

Query: 463 YQGAPADPNYGN-AYPQSGYAAAPTSGQPGYGQ-AGYTQP-PATNP 335
           Y G+P    YG  +    GY A P   QPGYG  AGY QP P  +P
Sbjct: 17  YPGSPPPGGYGQPSVLPGGYPAYPAYPQPGYGHPAGYPQPVPPVHP 62

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>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma|
           breakpoint region 1 protein)
          Length = 656

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 30/103 (29%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
 Frame = -3

Query: 505 AYGDQSAQNNANYGYQGAPADPNYGNAYPQSGY---AAAPTSGQPGYGQAGYTQPPATNP 335
           AYG QS      YG  G P D +Y  A   + Y   A A + GQP  G    T P A + 
Sbjct: 35  AYGQQS------YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQ 88

Query: 334 PSYDQSXXXXXXXXXXXXXXXXXXXXAKGVSPQPATAAGYGGQ 206
           P                               QPA  A YG Q
Sbjct: 89  PVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA-YGQQ 130



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 32/94 (34%), Positives = 37/94 (39%), Gaps = 31/94 (32%)
 Frame = -3

Query: 514 SQPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPT----------SGQP----- 380
           +Q +Y  QSA     YG Q  PA P YG    Q   A APT          + QP     
Sbjct: 108 TQASYAAQSA-----YGTQ--PAYPAYG----QQPAATAPTRPQDGNKPTETSQPQSSTG 156

Query: 379 -------GYGQAGYTQP---------PATNPPSY 326
                  GYGQ+ Y+ P         P T PPSY
Sbjct: 157 GYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSY 190

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>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)|
          Length = 518

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATN 338
           +S P YG Q A ++ +  Y G+    +YG   PQSG      SG  G  Q+   Q  + N
Sbjct: 96  SSYPGYGQQPAPSSTSGSYGGSSQSSSYGQ--PQSG-GYGQQSGYGGQQQSYGQQQSSYN 152

Query: 337 PP 332
           PP
Sbjct: 153 PP 154

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>PMP13_CHLPN (Q9Z896) Probable outer membrane protein pmp13 precursor|
           (Polymorphic membrane protein 13) (Outer membrane
           protein 14)
          Length = 973

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -3

Query: 505 AYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQP--GYGQAGYTQPPATNPP 332
           A G+ +  NN++  +Q   A P   N+ P       P +  P  GYG A +  PPAT PP
Sbjct: 269 ANGNVTFSNNSDLTFQNNTASPQ--NSLPAPTPPPTPPAVTPLLGYGGAIFCTPPATPPP 326

Query: 331 S 329
           +
Sbjct: 327 T 327

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>Y2118_MYCBO (P64940) Hypothetical protein Mb2118c|
          Length = 244

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 31/86 (36%), Positives = 31/86 (36%), Gaps = 25/86 (29%)
 Frame = -3

Query: 508 PAYGDQSAQNNANYGYQGAPADPNYGNAYPQ--SGYA------AAPTS------------ 389
           PAY  Q  Q          PADP Y   YPQ   GYA      A PT             
Sbjct: 47  PAYTPQYQQ----------PADPAYPQQYPQPTPGYAQPEQFGAQPTQLGVPGQYGQYQQ 96

Query: 388 ----GQPG-YGQAGYTQPPATNPPSY 326
               GQPG YGQ G   PP   P  Y
Sbjct: 97  PGQYGQPGQYGQPGQYAPPGQYPGQY 122

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>Y2091_MYCTU (P64939) Hypothetical protein Rv2091c/MT2152|
          Length = 244

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 31/86 (36%), Positives = 31/86 (36%), Gaps = 25/86 (29%)
 Frame = -3

Query: 508 PAYGDQSAQNNANYGYQGAPADPNYGNAYPQ--SGYA------AAPTS------------ 389
           PAY  Q  Q          PADP Y   YPQ   GYA      A PT             
Sbjct: 47  PAYTPQYQQ----------PADPAYPQQYPQPTPGYAQPEQFGAQPTQLGVPGQYGQYQQ 96

Query: 388 ----GQPG-YGQAGYTQPPATNPPSY 326
               GQPG YGQ G   PP   P  Y
Sbjct: 97  PGQYGQPGQYGQPGQYAPPGQYPGQY 122

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>YN18_YEAST (P53836) Hypothetical 118.3 kDa protein in ERG24-MET2 intergenic|
            region
          Length = 1060

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -3

Query: 475  ANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPA 344
            AN  Y   P  P      P + Y   P   QP  G AGY +PPA
Sbjct: 986  ANVNYNTRPQQPWPTPNSPSAHYRPPPNLNQPQNGSAGYYRPPA 1029

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>OPSD_LOLFO (P24603) Rhodopsin|
          Length = 452

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
 Frame = -3

Query: 460 QGAPADPNYGNAYPQSGYAAAPTSGQP-------GYGQAGYTQPPATNPP 332
           Q  PA P  G  YP  GY   P  G P       GY   GY  PP   PP
Sbjct: 385 QQQPAYPPQG--YPPQGYPPPPPQGYPPQGYPPQGYPPQGYPPPPQGPPP 432

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>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 1/102 (0%)
 Frame = -3

Query: 514 SQPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNP 335
           +QP  G  S Q+N  YG Q       YG +   SGY  +  SG  G  Q  Y+   A  P
Sbjct: 19  TQPGQG-YSQQSNQPYGQQSYGG---YGQSTDTSGYGQSSYSGSYGQTQNSYSTQSA--P 72

Query: 334 PSYDQSXXXXXXXXXXXXXXXXXXXXAKGVSPQPATAAG-YG 212
             Y  +                      G  P P++ +G YG
Sbjct: 73  QGYGSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYG 114



 Score = 32.3 bits (72), Expect = 1.4
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYG--QAGYTQPPA 344
           +S P YG Q A ++ +  Y  +     YG   PQ G        Q GYG  Q  Y Q  +
Sbjct: 95  SSYPGYGQQPAPSSTSGSYGSSSQSSGYGQ--PQGG----GYGQQSGYGGQQQSYGQQQS 148

Query: 343 TNPP 332
            NPP
Sbjct: 149 YNPP 152

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>OPSD_SEPOF (O16005) Rhodopsin|
          Length = 464

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 22/52 (42%), Positives = 23/52 (44%)
 Frame = -3

Query: 484 QNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNPPS 329
           Q  A Y  QGA   P  G  YP  GY   P  G  GY   GY  PP   PP+
Sbjct: 382 QQQAAYPPQGAY--PPQGG-YPPQGYPPPPAQG--GYPPQGYPPPPQGYPPA 428



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 25/63 (39%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = -3

Query: 511 QPAYGDQSAQN-NANYGYQGAPADPNYGNAYPQSGYAAAPTSGQP--GYGQAGYTQPPAT 341
           Q AY  Q A      Y  QG P  P  G  YP  GY   P    P  GY   GY  PP  
Sbjct: 384 QAAYPPQGAYPPQGGYPPQGYPPPPAQGG-YPPQGYPPPPQGYPPAQGYPPQGY-PPPQG 441

Query: 340 NPP 332
            PP
Sbjct: 442 APP 444

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>OPSD_LOLSU (Q17094) Rhodopsin (Fragment)|
          Length = 439

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
 Frame = -3

Query: 460 QGAPADPNYGNAYPQSGYAAAPTSGQP-------GYGQAGYTQPPATNPP 332
           Q  PA P  G  YP  GY   P  G P       GY   GY  PP   PP
Sbjct: 378 QQQPAYPPQG--YPPQGYPPPPPQGYPPQGYPPQGYPPQGYPPPPQGPPP 425

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>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6|
          Length = 880

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 427 HSHSWDQPG--LPDNHSLHCFELTDHHMLAAMQDTAHSRLADCTLVLPEHSDHMLLALAH 600
           HSH    P   LP +H LH    T H + AA    AH+           H+ H   A A 
Sbjct: 592 HSHFGQHPLSLLPSHHQLHA---THHELSAAAAHHAHAHA---------HAAH---AHAL 636

Query: 601 SAAGSPAEHTH 633
           + AGSP EH H
Sbjct: 637 ARAGSPMEHHH 647

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>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000|
          Length = 395

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
 Frame = -3

Query: 508 PAYGDQSAQNNAN-----YGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPA 344
           P YG    QNN         Y G P  PNYG A P +    AP    P YG     Q  A
Sbjct: 296 PPYG-APPQNNMGGPRPPQNYGGTPP-PNYGGAPPANNMGGAP---PPNYGGGPPPQYGA 350

Query: 343 TNPPSY 326
             PP Y
Sbjct: 351 VPPPQY 356

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>SGP3_CHRVI (O52055) Sulfur globule protein CV3 precursor|
          Length = 102

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
 Frame = -3

Query: 442 PNYGNAYPQSGYAA-----APTSGQPGYGQAGYTQPPATNPPSYDQ 320
           P +G  YP   Y       AP  G PGY   GY  P  T P +  Q
Sbjct: 57  PYHGGYYPYGLYGVPYGWGAPVYGYPGYVYPGYAYPAPTQPSTKSQ 102

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>UVI15_SCHPO (P40388) UV-induced protein uvi15|
          Length = 87

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPNYGNA--------YPQSGYAAAPTSGQPGY--GQ 368
           ++Q  YGD+        GY  AP    YG          YPQ GYA      Q GY   Q
Sbjct: 2   SAQQFYGDK--------GYAPAPPQQAYGGPNYYPPQQNYPQQGYAPPQGYPQGGYPAQQ 53

Query: 367 AGYTQPPATNPPSYD 323
             Y Q P  + P  D
Sbjct: 54  PMYVQQPQASDPGGD 68

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>KIN25_CAEEL (Q10925) Probable tyrosine-protein kinase kin-25 (EC 2.7.10.2)|
          Length = 1237

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 478  NANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGY 374
            N++ GY      PNYGN +   GY      G PGY
Sbjct: 1048 NSSNGYPQLNGYPNYGNGFQAYGYGMNYHQGYPGY 1082

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>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor|
          Length = 648

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 19/84 (22%)
 Frame = -3

Query: 511 QPAYGDQSAQNNANYGYQGAPADPNYGN------------AYPQSGYAAAPTSGQ----- 383
           QP  G Q  Q    Y Y  +P  P  G             +  QSG A  P  GQ     
Sbjct: 498 QPGQGQQLGQGQQGY-YPTSPQQPGQGQQPGQGQQGHCPTSPQQSGQAQQPGQGQQIGQV 556

Query: 382 --PGYGQAGYTQPPATNPPSYDQS 317
             PG GQ GY       P    QS
Sbjct: 557 QQPGQGQQGYYPTSVQQPGQGQQS 580

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>MGAT2_HUMAN (Q10469) Alpha-1,6-mannosyl-glycoprotein|
           2-beta-N-acetylglucosaminyltransferase (EC 2.4.1.143)
           (Mannoside acetylglucosaminyltransferase 2)
           (N-glycosyl-oligosaccharide-glycoprotein
           N-acetylglucosaminyltransferase II)
           (Beta-1,2-N-acetylglucosam
          Length = 447

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +1

Query: 409 ILTVGRHSHSWDQPGLPDNHSLHCFELTDHHMLAAMQDTAHSRLADCTLVLPEHSDH 579
           +L++G +S S    G+ D   +  ++ T+H+M  A+   A+ +L +CT     + D+
Sbjct: 288 VLSLGTYSASRSFYGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDY 344

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>POLG_HCVTR (Q81487) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3022

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 448 ADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNPPSYDQS 317
           A P  G ++ Q GY   P  G  G G AG+  PP  + PS+ Q+
Sbjct: 67  ARPREGRSWAQPGYPW-PLYGNEGCGWAGWLLPPRGSRPSWGQN 109

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>ZCHC2_HUMAN (Q9C0B9) Zinc finger CCHC domain-containing protein 2 (Fragment)|
          Length = 899

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 508 PAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNPPS 329
           PA G  +AQ  A+Y   G+P       +   S  + A TS QP    AG +Q  AT PP+
Sbjct: 624 PAAGLSAAQPPASYPLPGSPLAAGVLPSQNSSVLSTAATSPQP--ASAGISQAQATVPPA 681

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>34KD_MYCPA (Q04959) 34 kDa antigenic protein|
          Length = 298

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
 Frame = -3

Query: 511 QPAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSG-------QPGYGQAGYTQ 353
           QP YG    Q     G Q   +   YG+ Y   G   APT G       Q G  Q+   Q
Sbjct: 186 QPYYGQPGGQPGGQPGGQ-QHSPQGYGSQYGGYGQGGAPTGGFGAQPSPQSGPQQSAQQQ 244

Query: 352 PPATNPPSY 326
            P+T P  +
Sbjct: 245 GPSTPPTGF 253

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>SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequence-specific|
           single-stranded-DNA-binding protein) (Lck-associated
           signal transducer)
          Length = 388

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = -3

Query: 496 DQSAQNNANYGYQGAPA-DPNYGNAYPQSGYAAAPT-----SGQPGYGQAGYTQPPATNP 335
           + S++  A + Y  A A  P  GN  P  G    P       G PG   + + QPP  NP
Sbjct: 81  EHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNP 140

Query: 334 PS 329
            S
Sbjct: 141 SS 142

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>SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequence-specific|
           single-stranded-DNA-binding protein)
          Length = 388

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = -3

Query: 496 DQSAQNNANYGYQGAPA-DPNYGNAYPQSGYAAAPT-----SGQPGYGQAGYTQPPATNP 335
           + S++  A + Y  A A  P  GN  P  G    P       G PG   + + QPP  NP
Sbjct: 81  EHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNP 140

Query: 334 PS 329
            S
Sbjct: 141 SS 142

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>CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2) (Class-I chitin
           synthase 2)
          Length = 928

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPNYGN-AYPQSGYAAAPTSGQPGYGQAGYTQPPAT 341
           A QP Y  ++  N   YG Q     P+ G+  Y ++ Y  +P      Y    YTQP + 
Sbjct: 63  AMQPTYSVENVHNPQAYGQQYGQHLPDSGDMGYGRNDYIVSPEEHHDAY----YTQPYSP 118

Query: 340 NP---------PSYDQ 320
           +P         PS+D+
Sbjct: 119 HPQGDYALDPYPSHDE 134

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>YV59_CAEEL (P50439) Hypothetical protein F53A9.9|
          Length = 147

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
 Frame = -3

Query: 472 NYGYQGAPADPNYGNA--------YPQSGYAAAPTSGQPGYGQAGYTQPPATNPP 332
           N GY G  A   YGNA        +  +GY   PT+G  G+G AGYT  P    P
Sbjct: 54  NGGYNGPQAQ--YGNAGQNQPSGPFGGAGYTG-PTAGT-GFGNAGYTPSPPAGVP 104

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>NKX25_RAT (O35767) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)|
           (rNKx-2.5)
          Length = 318

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 27/63 (42%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -3

Query: 511 QPAYGDQSAQNNANYGYQGAPADPNYG-NAYPQSGYAAAPTSGQPGYGQAGY-TQPPATN 338
           +P  GD +A   A YG  G  A   YG NAYP  GY  A  S  P Y  A Y   PPA +
Sbjct: 224 KPCLGDSAAYAPA-YGL-GLNA---YGYNAYPYPGYGGAACS--PAYSCAAYPAAPPAAH 276

Query: 337 PPS 329
            P+
Sbjct: 277 APA 279

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>SSBP3_CHICK (Q98948) Single-stranded DNA-binding protein 3 (Sequence-specific|
           single-stranded-DNA-binding protein)
          Length = 368

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = -3

Query: 496 DQSAQNNANYGYQGAPA-DPNYGNAYPQSGYAAAPT-----SGQPGYGQAGYTQPPATNP 335
           + S++  A + Y  A A  P  GN  P  G    P       G PG   + + QPP  NP
Sbjct: 81  EHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNP 140

Query: 334 PS 329
            S
Sbjct: 141 NS 142

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>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)|
           (Oncogene GLI)
          Length = 1106

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 448 ADPNYGNAYPQSGYAAAPTSGQPGYGQAG-YTQPPATNPPS 329
           A P+ G  +PQ  ++  P    P Y Q+G YTQPP    PS
Sbjct: 835 AHPSEGPPHPQPLFSHYPQPSPPQYLQSGPYTQPPPDYLPS 875

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>OPSD_TODPA (P31356) Rhodopsin|
          Length = 447

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
 Frame = -3

Query: 484 QNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQP--GYGQAGYTQPPATNPP 332
           Q  A Y  QG    P     YP  GY   P  G P  GY   GY  PP   PP
Sbjct: 382 QQQAAYPPQGYAPPPQ---GYPPQGY---PPQGYPPQGYPPQGYPPPPQGAPP 428

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>DHN3_PEA (P28641) Dehydrin DHN3|
          Length = 232

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 514 SQPAYGDQSAQNN--ANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQ 353
           ++P YG  +  +      GY G+  +P+YG+    SGY         GYG +G T+
Sbjct: 85  TKPEYGSTNTGSGYGTGTGYGGSGTNPDYGSTNTGSGYGTG-----TGYGGSGTTE 135

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>ANX11_RABIT (P33477) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)|
           (CAP-50)
          Length = 503

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
 Frame = -3

Query: 478 NANYGYQGAPADPNYGNAYPQSGYAAAPTSG-------QPGYGQAGYTQPPATNPPS 329
           N +  + GA   PN     P  GY   P  G       QP     G   PP  NPPS
Sbjct: 58  NMSGTFGGANVPPNLYPGAPGGGYPPVPPGGFGQPPPTQPSVPPYGVYPPPGGNPPS 114

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>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = -3

Query: 466  GYQGAPADPNYGNAYPQSGYAAAP-TSGQPGY-GQAGYTQPP 347
            GYQG P DP       Q G    P   G PG  GQ G   PP
Sbjct: 982  GYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPP 1023

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>YIPF5_RAT (Q5XID0) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A)
          Length = 257

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = -3

Query: 496 DQSAQNNANYGYQGAPADPNY-GNAYPQSGYAAAPTSGQPGYGQAGYT-QPPATNPPSYD 323
           D+ +Q + +YG  G P    Y G  Y Q G    P   QP     G   QP    PP   
Sbjct: 19  DEQSQQSYDYGGSGGPYSKQYAGCEYSQQGRFVPPDMMQPQQTYTGQIYQPTQAYPPPTP 78

Query: 322 QS 317
           Q+
Sbjct: 79  QT 80

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>RPOB_LACPL (Q88XZ3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1204

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -1

Query: 498  VISQLKTMQTMVIREPRLIPTMGMPTHSQDMLLHRQVVSLDMVRQDTPSHQLQIRQV 328
            V+ ++KT + +V  EP  IP  G+P   + ++   Q + LDM   D+   ++++R +
Sbjct: 1103 VVGRVKTYEAIVKGEP--IPKPGVPESFRVLVKELQALGLDMKVLDSEDKEIELRDM 1157

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>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 353

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = -3

Query: 502 YGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAG 362
           YG      +   GY G P   N+G +    G       G PGYG  G
Sbjct: 234 YGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQG 280

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>HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-like protein 1|
           (Adenovirus early region 1B-associated protein 5)
           (E1B-55 kDa-associated protein 5) (E1B-AP5)
          Length = 856

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
 Frame = -3

Query: 511 QPAYGDQSAQNNANY--GYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATN 338
           QP+Y  Q   N   Y  GY   P  P    AY    Y         GY  A YT PP   
Sbjct: 754 QPSYS-QPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYG--------GYNPAPYTPPPPPT 804

Query: 337 PPSYDQ 320
             +Y Q
Sbjct: 805 AQTYPQ 810

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>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 341

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = -3

Query: 502 YGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAG 362
           YG      +   GY G P   N+G +    G       G PGYG  G
Sbjct: 222 YGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQG 268

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>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1|
          Length = 859

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
 Frame = -3

Query: 397 PTSGQPGYGQAGYTQ------PPATNPPSYD 323
           P+  QP Y Q GYTQ      PP   PP+Y+
Sbjct: 758 PSYSQPPYNQGGYTQGYTAPPPPPPPPPAYN 788

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>YE9A_SCHPO (O13772) Hypothetical proline/serine-rich protein C17A5.10 in|
           chromosome I
          Length = 224

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGAPADPN-YGNAYPQSGYAAA------PTSGQPGYGQAGY 359
           A  P+    +  N A       P   +  GNAY Q+ Y  A      P S QPG     Y
Sbjct: 35  AGHPSSSSSTLPNYAASSLNSRPVSSSGSGNAYSQAPYPPARPTSQRPNSWQPGNASTMY 94

Query: 358 TQPPATN 338
             PP ++
Sbjct: 95  ASPPPSS 101

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>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 238

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = -3

Query: 472 NYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYG------QAGYTQPPATNPPSYDQ 320
           N GYQ AP       A  Q+ YA AP +  P Y       Q+GY QPPA    SY Q
Sbjct: 130 NGGYQSAPQQA----APAQNQYAPAPQAA-PAYQAPAPQPQSGYNQPPAQQ--SYGQ 179

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>CH18_DROSU (P24514) Chorion protein S18|
          Length = 174

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -3

Query: 508 PAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQA 365
           P+YG Q    +   GY+ AP    YGNA    G    P SG   YG A
Sbjct: 50  PSYGGQRGYGHNQGGYEAAPIASAYGNA--DIGNQYGPVSGS-RYGGA 94

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>SPC3_STRPU (P16537) SPEC3 protein|
          Length = 208

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 457 GAPADPNYGNAYPQSGYAAAPTSGQPGYG--QAGYTQPP 347
           GAP D     AYP     A P   QPGYG  Q GY QPP
Sbjct: 8   GAPTDAP--PAYPPPPQQAPPPQ-QPGYGQPQLGYGQPP 43

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>BRO1_DEBHA (Q6BRL3) Vacuolar protein-sorting protein BRO1 (BRO domain-containing|
            protein 1)
          Length = 970

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
 Frame = -3

Query: 511  QPAYGDQSA--QNNANYGYQGAPA-DPNYGNAYPQSGYAAAPTSG-----QPGYGQAGYT 356
            +P+YGDQS   Q NA++    +P+ + N    Y QS    + T G             Y+
Sbjct: 831  RPSYGDQSGTPQYNASHFSSNSPSLNHNLPPQYSQSSLHRSSTGGSFASHHSNESPGSYS 890

Query: 355  QPPATNPP 332
            +PP   PP
Sbjct: 891  RPPPALPP 898

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
 Frame = -3

Query: 442 PNYGNAYPQSGYAAAPTSGQ----PGYGQA----GYTQPPATNPPSY 326
           P+YG   P  G    P+ GQ    P +G A    G+T P   +PPS+
Sbjct: 120 PSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGGHTPPRGQHPPSH 166

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>CNC_DROME (P20482) Segmentation protein cap'n'collar|
          Length = 1383

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
 Frame = -3

Query: 436 YGNAYPQSGYAAAPTSGQPG----YGQAG-----YTQPPATNPPSY 326
           Y + YP   Y A+P++G PG    +GQ G       QPP   PP +
Sbjct: 708 YPHHYPGYSYQASPSNGAPGTPGQHGQYGSGANATLQPPPPPPPPH 753

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>RPOB_LACSS (Q38UQ2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1197

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -1

Query: 498  VISQLKTMQTMVIREPRLIPTMGMPTHSQDMLLHRQVVSLDMVRQDTPSHQLQIRQV 328
            V+ ++KT + +V  EP  IP  G+P   + ++   Q + LDM   D  + ++++R +
Sbjct: 1100 VVGRVKTYEAIVKGEP--IPKPGVPESFRVLVKELQSLGLDMKVLDIDNQEIELRDM 1154

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>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)|
          Length = 704

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = -3

Query: 454 APADPNYGNAYPQSGYAAAP----TSGQPGYGQAGYTQPPATNPP-SYDQS 317
           AP+DP+Y      +G AA P    T G  GY  AG  +  A +PP SY Q+
Sbjct: 323 APSDPDY------TGAAAQPREERTGGIGGYSAAGTREDRAGHPPGSYTQA 367

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>MAML1_HUMAN (Q92585) Mastermind-like protein 1 (Mam-1)|
          Length = 1016

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = -3

Query: 484 QNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQA 365
           QN+AN   QG+  D  YGN  P S Y A    G PG GQ+
Sbjct: 500 QNSANN--QGSVLD--YGNTKPLSHYKADCGQGSPGSGQS 535

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>ANXA7_XENLA (Q92125) Annexin A7 (Annexin VII) (Synexin)|
          Length = 512

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/58 (32%), Positives = 20/58 (34%)
 Frame = -3

Query: 508 PAYGDQSAQNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNP 335
           P  G   A      G    P  P +G      GY A P  G P YG  GY  P    P
Sbjct: 61  PHAGGYPAPGGYPGGMPSYPGAPGFGAPAGGQGYGAPP--GAPAYGVPGYGGPGFNAP 116

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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/46 (34%), Positives = 18/46 (39%)
 Frame = -3

Query: 466 GYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNPPS 329
           G  G P  P  G  YP  G    P    P  G   Y  PP + PP+
Sbjct: 329 GMGGMPPPPPPGMRYP-GGMPPPPPPRYPSAGPGMYPPPPPSRPPA 373

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>PSS_MYCLE (Q9ZBM2) CDP-diacylglycerol--serine O-phosphatidyltransferase (EC|
           2.7.8.8) (Phosphatidylserine synthase)
          Length = 300

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 308 WWCRLIITWRICSWWLGVSCLTISRLTTCRCSSIS 412
           WW     TW +C W  G S L ISR+   +  ++S
Sbjct: 163 WWTS---TWFLCIWVTGTSMLLISRIPMKKMHTVS 194

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>EOMES_XENLA (P79944) Eomesodermin|
          Length = 692

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 484 QNNANYGYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQA-GYTQPPAT 341
           Q++A Y   GA   P YG+  P +G++      +P Y     Y+Q P T
Sbjct: 178 QHSAVYPAGGAARYPPYGSMLPPAGFSPPVCPSRPQYSSGYQYSQAPGT 226

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>RPOB3_ENTFC (Q8GCR5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1208

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -1

Query: 498  VISQLKTMQTMVIREPRLIPTMGMPTHSQDMLLHRQVVSLDMVRQDTPSHQLQIRQV 328
            V+ ++KT + +V  EP  IP  G+P   + ++   Q + LDM   D    ++Q+R +
Sbjct: 1102 VVGRVKTYEAIVKGEP--IPKPGVPESFRVLVKELQSLGLDMRVLDIKDSEIQLRDM 1156

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>NKX25_HUMAN (P52952) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)|
           (Cardiac-specific homeobox) (Homeobox protein CSX)
          Length = 324

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
 Frame = -3

Query: 469 YGYQGAPADPNYGNAYPQSGYA------AAPTSGQPGYGQA 365
           YGY   PA P YG A    GY+      A P+  QP    A
Sbjct: 248 YGYNAYPAYPGYGGAACSPGYSCTAAYPAGPSPAQPATAAA 288

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>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 915

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
 Frame = -3

Query: 499 GDQSAQNNANYGYQGAPAD-----PNYGNAYPQSGY---AAAPTSGQPGYGQAGYTQPPA 344
           G++     AN+  +  PA      P  G   P S     A AP+ GQPG   AGY  PPA
Sbjct: 797 GEKKLTGGANWQPKVTPATWSAGVPPQGTVPPTSSVPPGAGAPSVGQPG---AGYGMPPA 853

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>SPRR3_RABIT (Q28658) Small proline-rich protein 3 (Cornifin beta)|
          Length = 231

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -3

Query: 466 GYQGAPADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQPPATNP 335
           GY   P  P+Y    P+SG  + P  G P   Q GYT+    NP
Sbjct: 177 GYSVIP-QPSYTKV-PESGCTSVPGPGYPTVPQPGYTKVQEPNP 218

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>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGA-----PADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQ 353
           A   +YG QSA ++  YG Q A     P+      + P +   AA  S QP    A Y  
Sbjct: 379 AQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQP----AAYVA 434

Query: 352 PPAT 341
            PAT
Sbjct: 435 QPAT 438

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>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGA-----PADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQ 353
           A   +YG QSA ++  YG Q A     P+      + P +   AA  S QP    A Y  
Sbjct: 379 AQAASYGAQSAASSLAYGAQAASYSAQPSASYSAQSAPYAAQQAASYSSQP----AAYVA 434

Query: 352 PPAT 341
            PAT
Sbjct: 435 QPAT 438

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>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)|
           (RRM-containing coactivator activator/modulator)
           (Synaptotagmin-interacting protein) (SYT-interacting
           protein)
          Length = 669

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGA-----PADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQ 353
           A   +YG QSA ++  YG Q A     P+      + P +   AA  S QP    A Y  
Sbjct: 379 AQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQP----AAYVA 434

Query: 352 PPAT 341
            PAT
Sbjct: 435 QPAT 438

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>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -3

Query: 517 ASQPAYGDQSAQNNANYGYQGA-----PADPNYGNAYPQSGYAAAPTSGQPGYGQAGYTQ 353
           A   +YG QSA ++  YG Q A     P+      + P +   AA  S QP    A Y  
Sbjct: 379 AQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQP----AAYVA 434

Query: 352 PPAT 341
            PAT
Sbjct: 435 QPAT 438


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,252,855
Number of Sequences: 219361
Number of extensions: 1847475
Number of successful extensions: 6344
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6259
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result