ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds 111 1e-21
2ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-exp... 96 7e-17
3gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete... 96 7e-17
4gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 96 7e-17
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
6dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
7dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
8dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
9dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
10dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 96 7e-17
12gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence 88 2e-14
13gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, co... 88 2e-14
14gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, pa... 88 2e-14
15gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence 84 3e-13
16gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, com... 74 3e-10
17gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, com... 74 3e-10
18gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds 74 3e-10
19gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds 74 3e-10
20dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
21gb|AY111405.1| Zea mays CL5426_1 mRNA sequence 60 4e-06
22emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansi... 58 2e-05
23gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds 58 2e-05
24gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, com... 56 6e-05
25gb|DQ428284.1| Sorghum propinquum locus PRC0324 genomic sequence 52 0.001
26gb|DQ428283.1| Sorghum bicolor voucher PI585454 locus PRC0324 ge... 52 0.001
27gb|DQ428282.1| Sorghum bicolor voucher PI267539 locus PRC0324 ge... 52 0.001
28gb|DQ428281.1| Sorghum bicolor voucher PI267408 locus PRC0324 ge... 52 0.001
29gb|DQ428280.1| Sorghum bicolor voucher PI221607 locus PRC0324 ge... 52 0.001
30gb|DQ428279.1| Sorghum bicolor voucher PI152702 locus PRC0324 ge... 52 0.001
31gb|DQ428278.1| Sorghum bicolor voucher NSL92371 locus PRC0324 ge... 52 0.001
32gb|DQ428277.1| Sorghum bicolor voucher NSL87902 locus PRC0324 ge... 52 0.001
33gb|DQ428276.1| Sorghum bicolor voucher NSL87666 locus PRC0324 ge... 52 0.001
34gb|DQ428275.1| Sorghum bicolor voucher NSL77217 locus PRC0324 ge... 52 0.001
35gb|DQ428274.1| Sorghum bicolor voucher NSL77034 locus PRC0324 ge... 52 0.001
36gb|DQ428273.1| Sorghum bicolor voucher NSL56174 locus PRC0324 ge... 52 0.001
37gb|DQ428272.1| Sorghum bicolor voucher NSL56003 locus PRC0324 ge... 52 0.001
38gb|DQ428271.1| Sorghum bicolor voucher NSL55243 locus PRC0324 ge... 52 0.001
39gb|DQ428270.1| Sorghum bicolor voucher NSL51365 locus PRC0324 ge... 52 0.001
40gb|DQ428269.1| Sorghum bicolor voucher NSL51030 locus PRC0324 ge... 52 0.001
41gb|DQ428268.1| Sorghum bicolor voucher NSL50875 locus PRC0324 ge... 52 0.001
42gb|DQ428267.1| Sorghum bicolor voucher BTx623 locus PRC0324 geno... 52 0.001
43ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-exp... 50 0.004
44ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-exp... 50 0.004
45gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete... 50 0.004
46gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 50 0.004
47gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, co... 50 0.004
48dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
49dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
50dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
51dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
52dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
53dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
54dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
55gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds 44 0.23
56gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 3.6
57gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 40 3.6
58gb|AC111001.4| Homo sapiens BAC clone RP13-933J18 from 4, comple... 40 3.6
59gb|AC112232.5| Homo sapiens BAC clone RP11-166K6 from 4, complet... 40 3.6
60gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Can... 40 3.6
61gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, co... 40 3.6 
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds
          Length = 948

 Score =  111 bits (56), Expect = 1e-21
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  ||||||||||||||||||| |||||||||||||||||||
Sbjct: 876 tgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgaccttgt 817

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 816 tggcgacgagcgtcttgcc 798



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 134 acttgaccgtagcagctagctgcgtagtagcattacnagt 173
           |||||||||||||||||||| ||||||||||||||| |||
Sbjct: 948 acttgaccgtagcagctagccgcgtagtagcattactagt 909
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>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
           (OSJNBa0010C11.2), mRNA
          Length = 1340

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 963 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 904

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 903 tggcgacgagcgtcttgcc 885
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>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds
          Length = 1249

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 919 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 860

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 859 tggcgacgagcgtcttgcc 841
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                         
Query: 196   tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
             ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 16765 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 16706

                                
Query: 256   tggcnacnagcgtcttgcc 274
             |||| || |||||||||||
Sbjct: 16705 tggcgacgagcgtcttgcc 16687
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                            
Query: 196      tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
                ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 21341752 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 21341693

                                   
Query: 256      tggcnacnagcgtcttgcc 274
                |||| || |||||||||||
Sbjct: 21341692 tggcgacgagcgtcttgcc 21341674



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 221      ggtgttgggcctccanttggccgggatgacct 252
                |||||||| |||||| ||||||||||||||||
Sbjct: 21317193 ggtgttggccctccagttggccgggatgacct 21317224



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 240      gccgggatgaccttgttggcnacnagcgtcttgcc 274
                ||||||||||| |||||||| || |||||||||||
Sbjct: 21311350 gccgggatgacgttgttggcgacgagcgtcttgcc 21311384
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>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
           insert sequence
          Length = 1290

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 976 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 917

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 916 tggcgacgagcgtcttgcc 898
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>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
           insert sequence
          Length = 1266

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 969 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 910

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 909 tggcgacgagcgtcttgcc 891
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>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full
            insert sequence
          Length = 1883

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                        
Query: 196  tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
            ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 1553 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 1494

                               
Query: 256  tggcnacnagcgtcttgcc 274
            |||| || |||||||||||
Sbjct: 1493 tggcgacgagcgtcttgcc 1475
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>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
            insert sequence
          Length = 1475

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                        
Query: 196  tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
            ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 1157 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 1098

                               
Query: 256  tggcnacnagcgtcttgcc 274
            |||| || |||||||||||
Sbjct: 1097 tggcgacgagcgtcttgcc 1079
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>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
           insert sequence
          Length = 1293

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 975 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 916

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 915 tggcgacgagcgtcttgcc 897
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                            
Query: 196      tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
                ||||||| || ||||||||  |||| |||||||||||||| |||||||||||||| ||||
Sbjct: 21353015 tgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgt 21352956

                                   
Query: 256      tggcnacnagcgtcttgcc 274
                |||| || |||||||||||
Sbjct: 21352955 tggcgacgagcgtcttgcc 21352937



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 221      ggtgttgggcctccanttggccgggatgacct 252
                |||||||| |||||| ||||||||||||||||
Sbjct: 21328457 ggtgttggccctccagttggccgggatgacct 21328488



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 240      gccgggatgaccttgttggcnacnagcgtcttgcc 274
                ||||||||||| |||||||| || |||||||||||
Sbjct: 21322614 gccgggatgacgttgttggcgacgagcgtcttgcc 21322648
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>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence
          Length = 832

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  ||||||||||||| | ||| |||||||||||||| ||||
Sbjct: 300 tgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgt 241

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 240 tggcgacgagcgtcttgcc 222
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>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds
          Length = 1479

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  ||||||||||||| | ||| |||||||||||||| ||||
Sbjct: 936 tgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgt 877

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 876 tggcgacgagcgtcttgcc 858
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>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds
          Length = 907

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  ||||||||||||||||||| |||||||||||||| ||  
Sbjct: 523 tgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgttcc 464

                              
Query: 256 tggcnacnagcgtcttgcc 274
           |||| || |||||||||||
Sbjct: 463 tggcgacgagcgtcttgcc 445
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>gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence
          Length = 1044

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 196 tgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatgaccttgt 255
           ||||||| || ||||||||  ||||||||||||| | ||| |||||||||||||| ||||
Sbjct: 561 tgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgt 502

                            
Query: 256 tggcnacnagcgtcttg 272
           |||| || |||||||||
Sbjct: 501 tggcgacgagcgtcttg 485
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>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds
          Length = 1013

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 221 ggtgttgggcctccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||||||| |||||||||||||| |||||||| || ||| |||||||
Sbjct: 829 ggtgttgggcctccagttggccgggatgacattgttggccaccagcttcttgcc 776
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>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds
          Length = 897

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 189 cttnagntgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatg 248
           ||| || ||||||| || | ||||||  |||||||| |||||  ||| ||||||||||||
Sbjct: 834 cttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatg 775

                                     
Query: 249 accttgttggcnacnagcgtcttgcc 274
           ||||||| ||| || |||||||||||
Sbjct: 774 accttgtcggccaccagcgtcttgcc 749
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>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds
          Length = 1056

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 221 ggtgttgggcctccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||||||| |||||||||||||| |||||||| || ||| |||||||
Sbjct: 861 ggtgttgggcctccagttggccgggatgacattgttggccaccagcttcttgcc 808
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>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds
          Length = 810

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 189 cttnagntgtactgcacnaaggagcgnaagaaggtgttgggcctccanttggccgggatg 248
           ||| || ||||||| || | ||||||  |||||||| |||||  ||| ||||||||||||
Sbjct: 807 cttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatg 748

                                     
Query: 249 accttgttggcnacnagcgtcttgcc 274
           ||||||| ||| || |||||||||||
Sbjct: 747 accttgtcggccaccagcgtcttgcc 722
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>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
           insert sequence
          Length = 1794

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 227 gggcctccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||| | |||||||||||| |||||||| || |||||||||||
Sbjct: 944 gggcctccagtaggccgggatgacgttgttggcgacgagcgtcttgcc 897
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>gb|AY111405.1| Zea mays CL5426_1 mRNA sequence
          Length = 528

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 220 aggtgttgggcctccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||   ||| |||||||||||||||| |||||| || |||||||||||
Sbjct: 286 aggtgttgggaacccagttggccgggatgacctggttggccaccagcgtcttgcc 340
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>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene)
          Length = 1194

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 221 ggtgttgggcctccanttggccgggatgaccttgttggcnacnagc 266
           ||||||||||||||| |||||||||||||  |||||||| || |||
Sbjct: 862 ggtgttgggcctccagttggccgggatgatgttgttggcgacgagc 817
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>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds
          Length = 834

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 217 agaaggtgttgggcctccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||||||| |||||  ||| ||||||||||||||||||| ||| || |||| ||||||
Sbjct: 785 agaaggtgctgggcgcccagttggccgggatgaccttgtcggccaccagcgacttgcc 728
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>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds
          Length = 898

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 222 gtgttgggcctccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| ||||||||| |||||||||||||| |  ||||| || |||||||||||
Sbjct: 821 gtgtcgggcctccagttggccgggatgacttgtttggccaccagcgtcttgcc 769
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>gb|DQ428284.1| Sorghum propinquum locus PRC0324 genomic sequence
          Length = 477

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428283.1| Sorghum bicolor voucher PI585454 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428282.1| Sorghum bicolor voucher PI267539 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428281.1| Sorghum bicolor voucher PI267408 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428280.1| Sorghum bicolor voucher PI221607 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428279.1| Sorghum bicolor voucher PI152702 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428278.1| Sorghum bicolor voucher NSL92371 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428277.1| Sorghum bicolor voucher NSL87902 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428276.1| Sorghum bicolor voucher NSL87666 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428275.1| Sorghum bicolor voucher NSL77217 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428274.1| Sorghum bicolor voucher NSL77034 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428273.1| Sorghum bicolor voucher NSL56174 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428272.1| Sorghum bicolor voucher NSL56003 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428271.1| Sorghum bicolor voucher NSL55243 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428270.1| Sorghum bicolor voucher NSL51365 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428269.1| Sorghum bicolor voucher NSL51030 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428268.1| Sorghum bicolor voucher NSL50875 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>gb|DQ428267.1| Sorghum bicolor voucher BTx623 locus PRC0324 genomic sequence
          Length = 467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 232 tccanttggccgggatgaccttgttggcnacnagcgtcttgcc 274
           |||| |||||||||||||| ||| |||| || |||||||||||
Sbjct: 275 tccagttggccgggatgacgttgctggccaccagcgtcttgcc 233
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>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2
           (OSJNBb0014I11.2), mRNA
          Length = 1262

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 221 ggtgttgggcctccanttggccgggatgacct 252
           |||||||| |||||| ||||||||||||||||
Sbjct: 825 ggtgttggccctccagttggccgggatgacct 794
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>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6
           (OSJNBb0014I11.3), mRNA
          Length = 1240

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 240 gccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||| |||||||| || |||||||||||
Sbjct: 875 gccgggatgacgttgttggcgacgagcgtcttgcc 841
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>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds
          Length = 1250

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 240 gccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||| |||||||| || |||||||||||
Sbjct: 868 gccgggatgacgttgttggcgacgagcgtcttgcc 834
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 240   gccgggatgaccttgttggcnacnagcgtcttgcc 274
             ||||||||||| |||||||| || |||||||||||
Sbjct: 23009 gccgggatgacgttgttggcgacgagcgtcttgcc 22975



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 221   ggtgttgggcctccanttggccgggatgacct 252
             |||||||| |||||| ||||||||||||||||
Sbjct: 17166 ggtgttggccctccagttggccgggatgacct 17135
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>gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, complete cds
          Length = 999

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 221 ggtgttgggcctccanttggccgggatgacct 252
           |||||||| |||||| ||||||||||||||||
Sbjct: 825 ggtgttggccctccagttggccgggatgacct 794
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>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full
           insert sequence
          Length = 1257

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 240 gccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||| |||||||| || |||||||||||
Sbjct: 888 gccgggatgacgttgttggcgacgagcgtcttgcc 854
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>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full
           insert sequence
          Length = 1257

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 240 gccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||| |||||||| || |||||||||||
Sbjct: 888 gccgggatgacgttgttggcgacgagcgtcttgcc 854
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>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full
           insert sequence
          Length = 1043

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 221 ggtgttgggcctccanttggccgggatgacct 252
           |||||||| |||||| ||||||||||||||||
Sbjct: 824 ggtgttggccctccagttggccgggatgacct 793
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>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full
           insert sequence
          Length = 1263

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 240 gccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||| |||||||| || |||||||||||
Sbjct: 894 gccgggatgacgttgttggcgacgagcgtcttgcc 860
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>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full
           insert sequence
          Length = 1259

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 240 gccgggatgaccttgttggcnacnagcgtcttgcc 274
           ||||||||||| |||||||| || |||||||||||
Sbjct: 888 gccgggatgacgttgttggcgacgagcgtcttgcc 854
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>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full
           insert sequence
          Length = 1259

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 221 ggtgttgggcctccanttggccgggatgacct 252
           |||||||| |||||| ||||||||||||||||
Sbjct: 822 ggtgttggccctccagttggccgggatgacct 791
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>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full
           insert sequence
          Length = 1026

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 221 ggtgttgggcctccanttggccgggatgacct 252
           |||||||| |||||| ||||||||||||||||
Sbjct: 815 ggtgttggccctccagttggccgggatgacct 784
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>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds
          Length = 1078

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 240 gccgggatgaccttgttggcnacnagcgtctt 271
           ||||||||||| |||||||| || ||||||||
Sbjct: 794 gccgggatgacattgttggccacaagcgtctt 763
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     cacacccacccaaccagata 82
              ||||||||||||||||||||
Sbjct: 220382 cacacccacccaaccagata 220401
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
              BACR09L14, complete sequence
          Length = 167368

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     cacacccacccaaccagata 82
              ||||||||||||||||||||
Sbjct: 130202 cacacccacccaaccagata 130221
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>gb|AC111001.4| Homo sapiens BAC clone RP13-933J18 from 4, complete sequence
          Length = 119175

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    cccaaccaaacctttttctc 37
             ||||||||||||||||||||
Sbjct: 66963 cccaaccaaacctttttctc 66944
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>gb|AC112232.5| Homo sapiens BAC clone RP11-166K6 from 4, complete sequence
          Length = 171050

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    cccaaccaaacctttttctc 37
             ||||||||||||||||||||
Sbjct: 62556 cccaaccaaacctttttctc 62537
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>gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163111

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ctttttctcacctagtaaag 48
             ||||||||||||||||||||
Sbjct: 52709 ctttttctcacctagtaaag 52690
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>gb|AC108811.12| Mus musculus chromosome 8, clone RP23-284C19, complete sequence
          Length = 212270

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    cacacacccacccaaccaga 80
             ||||||||||||||||||||
Sbjct: 69354 cacacacccacccaaccaga 69335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,075,367
Number of Sequences: 3902068
Number of extensions: 1075367
Number of successful extensions: 19932
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19856
Number of HSP's gapped (non-prelim): 76
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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