>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Plus

                                                                           
Query: 349     tgtataatcccatgagaggcttctccctgtcctccactcttttcctcgctgcttcccgtg 408
               |||||| |||||| |  ||||||||||| ||||||| |||||| || |||||||| || |
Sbjct: 5868556 tgtatagtcccattaagggcttctccctatcctccattctttttcttgctgcttcacgcg 5868615

                                                                           
Query: 409     ctctgagtgccgcctcctcctccttggaaaccaccttgggcttcttggtgtcctctcttt 468
               || | || || || ||||||||||| || | ||| ||||||||   |  |||||||||||
Sbjct: 5868616 ctttaagggcggcttcctcctcctttgagatcactttgggctt---gccgtcctctcttt 5868672

                                                                           
Query: 469     ttcgcttgttagcggcaagggctgacggagcgcccttcacaggtctcatcgggttcagtt 528
               ||| ||||||| | |||| ||| || ||||| ||||| |||| ||||||||| |||||| 
Sbjct: 5868673 ttctcttgttaacagcaatggcggatggagcaccctttacagttctcatcggattcagtg 5868732

                                                       
Query: 529     gtttcgtgacaaccacacctggggctggccctcctttaat 568
               ||||| |||| |||| |||||| ||| | || ||||||||
Sbjct: 5868733 gtttcttgacgaccaaacctggagcttggccccctttaat 5868772

>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Plus

                                                                         
Query: 349   tgtataatcccatgagaggcttctccctgtcctccactcttttcctcgctgcttcccgtg 408
             |||||| |||||| |  ||||||||||| ||||||| |||||| || |||||||| || |
Sbjct: 69331 tgtatagtcccattaagggcttctccctatcctccattctttttcttgctgcttcacgcg 69390

                                                                         
Query: 409   ctctgagtgccgcctcctcctccttggaaaccaccttgggcttcttggtgtcctctcttt 468
             || | || || || ||||||||||| || | ||| ||||||||   |  |||||||||||
Sbjct: 69391 ctttaagggcggcttcctcctcctttgagatcactttgggctt---gccgtcctctcttt 69447

                                                                         
Query: 469   ttcgcttgttagcggcaagggctgacggagcgcccttcacaggtctcatcgggttcagtt 528
             ||| ||||||| | |||| ||| || ||||| ||||| |||| ||||||||| |||||| 
Sbjct: 69448 ttctcttgttaacagcaatggcggatggagcaccctttacagttctcatcggattcagtg 69507

                                                     
Query: 529   gtttcgtgacaaccacacctggggctggccctcctttaat 568
             ||||| |||| |||| |||||| ||| | || ||||||||
Sbjct: 69508 gtttcttgacgaccaaacctggagcttggccccctttaat 69547

>dbj|AK065717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038O15, full
           insert sequence
          Length = 1159

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Minus

                                                                       
Query: 349 tgtataatcccatgagaggcttctccctgtcctccactcttttcctcgctgcttcccgtg 408
           |||||| |||||| |  ||||||||||| ||||||| |||||| || |||||||| || |
Sbjct: 847 tgtatagtcccattaagggcttctccctatcctccattctttttcttgctgcttcacgcg 788

                                                                       
Query: 409 ctctgagtgccgcctcctcctccttggaaaccaccttgggcttcttggtgtcctctcttt 468
           || | || || || ||||||||||| || | ||| ||||||||   |  |||||||||||
Sbjct: 787 ctttaagggcggcttcctcctcctttgagatcactttgggctt---gccgtcctctcttt 731

                                                                       
Query: 469 ttcgcttgttagcggcaagggctgacggagcgcccttcacaggtctcatcgggttcagtt 528
           ||| ||||||| | |||| ||| || ||||| ||||| |||| ||||||||| |||||| 
Sbjct: 730 ttctcttgttaacagcaatggcggatggagcaccctttacagttctcatcggattcagtg 671

                                                   
Query: 529 gtttcgtgacaaccacacctggggctggccctcctttaat 568
           ||||| |||| |||| |||||| ||| | || ||||||||
Sbjct: 670 gtttcttgacgaccaaacctggagcttggccccctttaat 631

>dbj|AK061707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F06, full
           insert sequence
          Length = 559

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 178/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Minus

                                                                       
Query: 349 tgtataatcccatgagaggcttctccctgtcctccactcttttcctcgctgcttcccgtg 408
           |||||| |||||| |  ||||||||||| ||||||| |||||| || |||||||| || |
Sbjct: 250 tgtatagtcccattaagggcttctccctatcctccattctttttcttgctgcttcacgcg 191

                                                                       
Query: 409 ctctgagtgccgcctcctcctccttggaaaccaccttgggcttcttggtgtcctctcttt 468
           || | || || || ||||||||||| || | ||| ||||||||   |  |||||||||||
Sbjct: 190 ctttaagggcggcttcctcctcctttgagatcactttgggctt---gccgtcctctcttt 134

                                                                       
Query: 469 ttcgcttgttagcggcaagggctgacggagcgcccttcacaggtctcatcgggttcagtt 528
           ||| ||||||| | |||| ||| || ||||| ||||| |||| ||||||||| |||||| 
Sbjct: 133 ttctcttgttaacagcaatggcggatggagcaccctttacagttctcatcggattcagtg 74

                                                   
Query: 529 gtttcgtgacaaccacacctggggctggccctcctttaat 568
           ||||| |||| |||| |||||| ||| | || ||||||||
Sbjct: 73  gtttcttgacgaccaaacctggagcttggccccctttaat 34

>dbj|AK072439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111C14, full
            insert sequence
          Length = 2720

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 177/220 (80%), Gaps = 3/220 (1%)
 Strand = Plus / Minus

                                                                        
Query: 349  tgtataatcccatgagaggcttctccctgtcctccactcttttcctcgctgcttcccgtg 408
            |||||| |||||| |  ||||||||||| ||||||| |||||| || |||||||| || |
Sbjct: 2307 tgtatagtcccattaagggcttctccctatcctccattctttttcttgctgcttcacgcg 2248

                                                                        
Query: 409  ctctgagtgccgcctcctcctccttggaaaccaccttgggcttcttggtgtcctctcttt 468
            || | || || || ||||||||||| || | ||| ||||||||   |  |||||||||||
Sbjct: 2247 ctttaagggcggcttcctcctcctttgagatcactttgggctt---gccgtcctctcttt 2191

                                                                        
Query: 469  ttcgcttgttagcggcaagggctgacggagcgcccttcacaggtctcatcgggttcagtt 528
            | | ||||||| | |||| ||| || ||||| ||||| |||| ||||||||| |||||| 
Sbjct: 2190 tgctcttgttaacagcaatggcggatggagcaccctttacagttctcatcggattcagtg 2131

                                                    
Query: 529  gtttcgtgacaaccacacctggggctggccctcctttaat 568
            ||||| |||| |||| |||||| ||| | || ||||||||
Sbjct: 2130 gtttcttgacgaccaaacctggagcttggccccctttaat 2091

>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence
          Length = 207840

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 370    tctccctgtcctccactcttttc 392
              |||||||||||||||||||||||
Sbjct: 129727 tctccctgtcctccactcttttc 129705

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 528     tgtttcgtgacaaccacacctg 549
               ||||||||||||||||||||||
Sbjct: 1472791 tgtttcgtgacaaccacacctg 1472770

>ref|XM_729219.1| Plasmodium chabaudi chabaudi hypothetical protein (PC405185.00.0)
           partial mRNA
          Length = 312

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 177 gtattgtacaatgcatacatgt 198
           ||||||||||||||||||||||
Sbjct: 17  gtattgtacaatgcatacatgt 38

>gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, complete sequence
          Length = 226794

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 177   gtattgtacaatgcatacatgt 198
             ||||||||||||||||||||||
Sbjct: 45450 gtattgtacaatgcatacatgt 45429

>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete
             sequence
          Length = 202525

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   aggtattgtacaatgcataca 195
             |||||||||||||||||||||
Sbjct: 24910 aggtattgtacaatgcataca 24930

>gb|AC124681.3| Mus musculus BAC clone RP24-261H7 from chromosome 16, complete sequence
          Length = 173837

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    aggtattgtacaatgcataca 195
              |||||||||||||||||||||
Sbjct: 152030 aggtattgtacaatgcataca 152050

>emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in linkage group 14,
             complete sequence
          Length = 190254

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   ctgtcctccactcttttcctc 395
             |||||||||||||||||||||
Sbjct: 45269 ctgtcctccactcttttcctc 45289

>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence
          Length = 175579

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    caatccactgggaagaaacaa 102
             |||||||||||||||||||||
Sbjct: 18980 caatccactgggaagaaacaa 19000

>gb|AC139638.14| Mus musculus chromosome 10, clone RP24-208F10, complete sequence
          Length = 154570

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   tctccctgtcctccactctt 389
             ||||||||||||||||||||
Sbjct: 20329 tctccctgtcctccactctt 20348

>gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, complete sequence
          Length = 214111

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    tctccctgtcctccactctt 389
              ||||||||||||||||||||
Sbjct: 181623 tctccctgtcctccactctt 181642

>emb|CR376775.7| Zebrafish DNA sequence from clone CH211-197C5 in linkage group 23,
             complete sequence
          Length = 196846

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ccccgtttttctttcagaac 261
             ||||||||||||||||||||
Sbjct: 92054 ccccgtttttctttcagaac 92035

>emb|CR936486.7| Zebrafish DNA sequence from clone DKEY-279C17 in linkage group 5,
             complete sequence
          Length = 90069

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ccccgtttttctttcagaac 261
             ||||||||||||||||||||
Sbjct: 56360 ccccgtttttctttcagaac 56341

>gb|AC125118.5| Mus musculus BAC clone RP24-264B17 from chromosome 1, complete sequence
          Length = 177149

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    aggccgatttaggaactttt 170
              ||||||||||||||||||||
Sbjct: 157867 aggccgatttaggaactttt 157848

>gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, complete sequence
          Length = 180560

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   ctccctgtcctccactcttt 390
             ||||||||||||||||||||
Sbjct: 68636 ctccctgtcctccactcttt 68617

>ref|XM_781842.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5912-PA
           (LOC581864), mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 112 tgataatggatgagctgtccattt 135
           ||||||||||||||||||| ||||
Sbjct: 149 tgataatggatgagctgtctattt 126

>emb|CR388089.8| Zebrafish DNA sequence from clone CH211-87C14, complete sequence
          Length = 165808

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    ggccgatttaggaacttttg 171
              ||||||||||||||||||||
Sbjct: 119030 ggccgatttaggaacttttg 119011

>gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, complete sequence
          Length = 178736

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 618   gattgggcaacattagtttc 637
             ||||||||||||||||||||
Sbjct: 54302 gattgggcaacattagtttc 54283

>dbj|AK141376.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430042B01
            product:unclassifiable, full insert sequence
          Length = 4713

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  ctccctgtcctccactcttt 390
            ||||||||||||||||||||
Sbjct: 1820 ctccctgtcctccactcttt 1801

>dbj|AK149089.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120482F07
           product:unclassifiable, full insert sequence
          Length = 4389

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  tccaatccactgggaagaaa 99
           ||||||||||||||||||||
Sbjct: 339 tccaatccactgggaagaaa 320

>gb|AC122427.6| Mus musculus BAC clone RP24-175C2 from chromosome 1, complete sequence
          Length = 180773

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   aggccgatttaggaactttt 170
             ||||||||||||||||||||
Sbjct: 12442 aggccgatttaggaactttt 12423

>dbj|AK037744.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130046B17
           product:unclassifiable, full insert sequence
          Length = 1559

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 tttttctttcagaacaatat 266
           ||||||||||||||||||||
Sbjct: 770 tttttctttcagaacaatat 789

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     tgccgcctcctcctccttgg 435
               ||||||||||||||||||||
Sbjct: 1158246 tgccgcctcctcctccttgg 1158265

>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete
             sequence
          Length = 210141

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   tttttctttcagaacaatat 266
             ||||||||||||||||||||
Sbjct: 16627 tttttctttcagaacaatat 16646

>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177364

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tccaatccactgggaagaaa 99
              ||||||||||||||||||||
Sbjct: 159343 tccaatccactgggaagaaa 159324

>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0698A04
          Length = 141079

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    tgccgcctcctcctccttgg 435
              ||||||||||||||||||||
Sbjct: 127560 tgccgcctcctcctccttgg 127579

>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684C01
          Length = 78600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   tgccgcctcctcctccttgg 435
             ||||||||||||||||||||
Sbjct: 12549 tgccgcctcctcctccttgg 12568

>gb|AC155847.3| Mus musculus 6 BAC RP24-158J4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151171

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   tctccctgtcctccactctt 389
             ||||||||||||||||||||
Sbjct: 9984  tctccctgtcctccactctt 10003

>ref|XM_308509.2| Anopheles gambiae str. PEST ENSANGP00000016759
           (ENSANGG00000014270), partial mRNA
          Length = 797

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 413 gagtgccgcctcctcctcct 432
           ||||||||||||||||||||
Sbjct: 594 gagtgccgcctcctcctcct 575

>emb|AJ331214.1|HSA331214 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-CA10RS
          Length = 764

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tcttggtgtcctctcttttt 470
           ||||||||||||||||||||
Sbjct: 318 tcttggtgtcctctcttttt 337

>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence
          Length = 209191

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    tctccctgtcctccactctt 389
              ||||||||||||||||||||
Sbjct: 142245 tctccctgtcctccactctt 142264

>gb|AC153547.3| Mus musculus 10 BAC RP23-429B12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206024

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tccaatccactgggaagaaa 99
              ||||||||||||||||||||
Sbjct: 187459 tccaatccactgggaagaaa 187478

>gb|M96798.1|PNLGTSYN Panulirus argus glutamine synthetase mRNA, complete cds
          Length = 2045

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   cattatatcatgtgcaatcc 82
            ||||||||||||||||||||
Sbjct: 1168 cattatatcatgtgcaatcc 1187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,917,710
Number of Sequences: 3902068
Number of extensions: 5917710
Number of successful extensions: 111985
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111771
Number of HSP's gapped (non-prelim): 209
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)