ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1h24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re... 31 2.5
2YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ 30 3.3

>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 19/65 (29%), Positives = 37/65 (56%)
 Frame = -2

Query: 538 SHTVQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAK 359
           S T +E P +   S   + AV + PPA+  + ++ + +++KE++D++ K M+    +  K
Sbjct: 57  SATKREKPVIQH-SIDYQTAVVEIPPALIVHDDRSLILSEKEVLDLFEKMMEDMNLNEEK 115

Query: 358 MKLPL 344
            K PL
Sbjct: 116 -KAPL 119



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>YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ|
          Length = 2660

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -2

Query: 529 VQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAKM 356
           V++   ++ P+ VSEN +  PP   S N EQ++    ++I  +  + M   +E  A M
Sbjct: 109 VRQGDELDVPAQVSENNLTPPPGNSSGNLEQQIASTSQQIGSLLAEDMN--SEQAANM 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,458,240
Number of Sequences: 219361
Number of extensions: 774264
Number of successful extensions: 2424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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