>IFRH_TOBAC (P52579) Isoflavone reductase homolog A622 (EC 1.3.1.-)|
          Length = 310

 Score =  115 bits (289), Expect = 5e-26
 Identities = 55/126 (43%), Positives = 83/126 (65%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N +AI+V  +D++  TI AV+DPRTL+K LH+RPPAN+ SF ++V L E K GKT E+ Y
Sbjct: 185 NPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKLY 244

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           ++E ++++ +QE P PL   LA+ HS   +  +    V P   VEAT LYP V++  V++
Sbjct: 245 LSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDE 304

Query: 124 CLDGFL 107
             + F+
Sbjct: 305 FYNKFV 310

>IFRH_MAIZE (P52580) Isoflavone reductase homolog IRL (EC 1.3.1.-)|
          Length = 309

 Score =  115 bits (288), Expect = 6e-26
 Identities = 55/126 (43%), Positives = 84/126 (66%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           +++A+FV   D++  T+ A +DPR  +K+L+++PPAN  S  +L+ L EKKTGKTF R Y
Sbjct: 184 DTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREY 243

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           V E  ++K+IQE+P PLN  LA+ H+           +DPA  V+A+ LYPDV++  V++
Sbjct: 244 VPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDE 303

Query: 124 CLDGFL 107
            L+ FL
Sbjct: 304 YLNRFL 309

>IFRH_SOLTU (P52578) Isoflavone reductase homolog (EC 1.3.1.-) (CP100)|
          Length = 308

 Score =  110 bits (274), Expect = 3e-24
 Identities = 50/126 (39%), Positives = 84/126 (66%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N++A+F   +D+   TI AV+DP+TL+KIL+++PP N+ +  +LV L EKKTGK  ER Y
Sbjct: 183 NTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERLY 242

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           V E +++K IQEA  P+N  L++ H+           ++P+  VEA+ +YPDV++  +++
Sbjct: 243 VPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDE 302

Query: 124 CLDGFL 107
            L+ ++
Sbjct: 303 ILNQYV 308

>IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-)|
          Length = 310

 Score =  103 bits (258), Expect = 2e-22
 Identities = 50/125 (40%), Positives = 85/125 (68%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N++A+    +D++  TI+AV+DPRTL+KIL+++P  N  S  ++V L EKK GK+ E+ +
Sbjct: 186 NAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTH 245

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           + E +L+K IQE+P P+N  L++ H+   + G    +++P+  VEA+ LYPDV++  V++
Sbjct: 246 LPEEQLLKSIQESPIPINVVLSINHAVFVN-GDTNISIEPSFGVEASELYPDVKYTSVDE 304

Query: 124 CLDGF 110
            L  F
Sbjct: 305 YLSYF 309

>IFR_MEDSA (P52575) Isoflavone reductase (EC 1.3.1.45) (IFR)|
           (2'-hydroxyisoflavone reductase) (NADPH:isoflavone
           oxidoreductase)
          Length = 318

 Score =  100 bits (248), Expect = 3e-21
 Identities = 50/126 (39%), Positives = 77/126 (61%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N +  +V   D+   TIRA  DP TL+K +H+R P N  +  +++ L EKK GKT E+ Y
Sbjct: 194 NVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIGKTLEKTY 253

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           V+E +++K IQE+ FP N+ LA+ HS     G   + +DPA  +EA+  YPDV +   ++
Sbjct: 254 VSEEQVLKDIQESSFPHNYLLALYHSQQI-KGDAVYEIDPAKDIEASEAYPDVTYTTADE 312

Query: 124 CLDGFL 107
            L+ F+
Sbjct: 313 YLNQFV 318

>IFR_CICAR (Q00016) Isoflavone reductase (EC 1.3.1.45) (IFR)|
           (2'-hydroxyisoflavone reductase) (NADPH:isoflavone
           oxidoreductase)
          Length = 318

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 51/126 (40%), Positives = 76/126 (60%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N +  +V   D+   TIRA  DPRTL+K +H+R P N  +  ++V L EKK GKT E+ Y
Sbjct: 194 NVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKTLEKSY 253

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           ++E +++K I  + FP N+ LA+ HS     G   + +DPA   EA  LYPDV++   ++
Sbjct: 254 ISEEKVLKDINVSTFPHNYLLALYHSQQI-KGDAVYEIDPAKDAEAYDLYPDVKYTTADE 312

Query: 124 CLDGFL 107
            LD F+
Sbjct: 313 YLDQFV 318

>IFR_PEA (P52576) Isoflavone reductase (EC 1.3.1.45) (IFR)|
           (2'-hydroxyisoflavone reductase) (NADPH:isoflavone
           oxidoreductase)
          Length = 318

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 51/126 (40%), Positives = 76/126 (60%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N R  +V   D+   TIRA  DP TL+K +H+R P N  +  +++ L EKK GKT E+ Y
Sbjct: 194 NVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIGKTLEKTY 253

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           V+E +++K IQ + FP N+ LA+ HS     G   + +DPA  VEA   YPDV++   ++
Sbjct: 254 VSEEQVLKDIQTSSFPHNYLLALYHSQQI-KGDAVYEIDPAKDVEAYDAYPDVKYTTADE 312

Query: 124 CLDGFL 107
            L+ F+
Sbjct: 313 YLNQFV 318

>LAR_DESUN (Q84V83) Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin|
           reductase)
          Length = 382

 Score = 82.4 bits (202), Expect = 6e-16
 Identities = 41/127 (32%), Positives = 67/127 (52%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N++A F++  D+   T++ ++D RTL+K +H RP +N  S  +L  L EKK G+T  R  
Sbjct: 192 NTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFT 251

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           VT  +L+    E   P +   +  H    +      ++D    VE   LYPD +F  ++D
Sbjct: 252 VTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDD 311

Query: 124 CLDGFLP 104
           C + F+P
Sbjct: 312 CYEDFVP 318

>IFRH_LUPAL (P52581) Isoflavone reductase homolog (EC 1.3.1.-)|
          Length = 312

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 29/122 (23%), Positives = 67/122 (54%)
 Frame = -2

Query: 484 NSRAIFVNXKDMSMLTIRAVEDPRTLDKILHVRPPANMRSFGQLVHLLEKKTGKTFERHY 305
           N + ++++  D++  TI+ ++DPRTL+K +++RPP N+ +  +L+   E+  GK  E++ 
Sbjct: 188 NVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQLEKNS 247

Query: 304 VTEPELVKKIQEAPFPLNFQLAMVHSTVAHAGACEHAVDPAVSVEATLLYPDVQFIKVED 125
           ++E + +  ++   F     +   +  + + G   +        EA+ LYP+V + +++ 
Sbjct: 248 ISEKDFLSTLKGLDFASQVGVGHFYH-IFYEGCLTNFEIGENGEEASELYPEVNYTRMDQ 306

Query: 124 CL 119
            L
Sbjct: 307 YL 308

>YPMC_ECOLI (P07115) Hypothetical mobilization operon protein C|
          Length = 112

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = +3

Query: 126 SSTLMNCTSGYSSVASTLTAGST---ACSHAPACATVECTIAS*KLRGNGASCIFLTSSG 296
           ++ L +  +  +S+AS+  A      A SH+ ACA++ C +     R + AS   L +SG
Sbjct: 24  AALLTSAATSRNSLASSTHAAPVWRWAFSHSAACASLACWVWLMTCRASSASVAMLWASG 83

Query: 297 SVT*CLSNVL 326
           S+  C +N L
Sbjct: 84  SI--CSANSL 91

>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +3

Query: 108 RKPSRQSSTLMNCTSGYSS-----VASTLTAGSTACSHAPACATVECTIAS*KLRGNGAS 272
           R P   SS+  +C+S  SS      AST +   T C+ A A A +     +  L   GA 
Sbjct: 261 RTPPPPSSSASSCSSSASSCSSASAASTPSGAPTCCATAAAAALLYGPGGAEDLLSPGAP 320

Query: 273 CIFLTSSGS 299
           C   +SSG+
Sbjct: 321 CASCSSSGA 329

>CU093_HUMAN (P59091) Protein C21orf93|
          Length = 139

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = -1

Query: 437 HKSRGGPTNA*QDPARAPPCQHALFWPARPSPGEENRQDIREALRHRTRARQENTRGSVP 258
           H  R  P +  QD AR P   H    PARPS            +RH+T   Q  +R  VP
Sbjct: 67  HLHRTRPPDTHQDMARGPGLPHTHGLPARPS-----------HVRHQTEPVQVASRWHVP 115

Query: 257 S 255
           S
Sbjct: 116 S 116

>GUX1_PENJA (Q06886) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)|
           (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase)
          Length = 537

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +3

Query: 54  TNCTARAPALSVSSQNAGRKPSRQSSTLMNCTSGYSSVA-----STLTAGSTACSHAPAC 218
           TN T+  P     + +  R+P+   ST  N    YS++      ST T G+T+ S +   
Sbjct: 413 TNATSTTPGAKRGTCDISRRPNTVESTYPNAYVIYSNIKTGPLNSTFTGGTTS-SSSTTT 471

Query: 219 ATVECTIAS*KLRGNGASCIFLTSSGS 299
            T + T  S   +         TSSGS
Sbjct: 472 TTSKSTSTSSSSKTTTTVTTTTTSSGS 498

>DAN1_YEAST (P47178) Cell wall protein DAN1 precursor (Covalently-linked cell|
           wall protein 13)
          Length = 298

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 24/89 (26%), Positives = 43/89 (48%)
 Frame = +3

Query: 54  TNCTARAPALSVSSQNAGRKPSRQSSTLMNCTSGYSSVASTLTAGSTACSHAPACATVEC 233
           +  ++ A   S SS+++    S  +ST    +S  SS AST+ + +     +   ++V  
Sbjct: 134 SEASSAATESSSSSESSAETSSNAASTQATVSSESSSAASTIASSA----ESSVASSVAS 189

Query: 234 TIAS*KLRGNGASCIFLTSSGSVT*CLSN 320
           ++AS     N  + +  TSS SVT  + N
Sbjct: 190 SVASSASFANTTAPVSSTSSISVTPVVQN 218

>SOX4_HUMAN (Q06945) Transcription factor SOX-4|
          Length = 474

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 39  YDGR*TNCTARAPALS-----VSSQNAGRKPSRQSSTLMNCTSGYSSVASTLTAGSTACS 203
           Y+     C+  AP+LS      SS  AGR P+           GY+S+ +   A S+A S
Sbjct: 325 YEEEGAGCSPDAPSLSGRSSAASSPAAGRSPADHR--------GYASLRAASPAPSSAPS 376

Query: 204 HAPACATVECTIAS 245
           HA + A+   + +S
Sbjct: 377 HASSSASSHSSSSS 390

>UREE_RHIME (Q92MY3) Urease accessory protein ureE|
          Length = 154

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +2

Query: 257 RERSLLYFLDELWF--GDVVPLECLAGFLLQEMDELAKRAHVGRGAHVQDLVKRSWVLHG 430
           R R+ L+ ++  W      +P     G +L   D + +    G GA V ++ +    LHG
Sbjct: 81  RARNPLHLMELAWHLGNRHLPAAVEEGRILIARDPVIRAMLEGLGATVDEVNEPFHPLHG 140

Query: 431 SYGQHAH 451
           +Y QH H
Sbjct: 141 AYHQHGH 147

>TRBG_AGRTU (P54915) Conjugal transfer protein trbG precursor|
          Length = 284

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 345 RWTSWPKERMLAGGRTCRILSSVRGSSTALMVSMLISXS 461
           RW   P+ R LAGG+   ++  V+ S   L+ SM+++ S
Sbjct: 106 RWKVEPRHRALAGGQAIHLI--VKPSEPGLVTSMVVTTS 142

>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1980

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
 Frame = +3

Query: 78  ALSVSSQNAGRKPSR------------QSSTLMNCTSGYSSVASTLTAGSTACSHAPACA 221
           A S SS N G  PS+            Q+STL   +SG+S V+S     S+  SH+ +  
Sbjct: 14  AFSASSSNVGTLPSKPPFRFGQPSLFGQNSTLSGKSSGFSQVSS--FPASSGVSHSSSVQ 71

Query: 222 TVECTIAS 245
           T+  T  S
Sbjct: 72  TLGFTQTS 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,491,045
Number of Sequences: 219361
Number of extensions: 1524432
Number of successful extensions: 5149
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5143
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)