ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1h10 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 159 bits (403), Expect = 4e-39 Identities = 73/134 (54%), Positives = 98/134 (73%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PPK GD SY Y AE IL+SL RRA+ + D FN+ + CN EGAMY FPQI LP++ Sbjct: 349 PPKVGDESYAAYKAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPKK 408 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A++ AK+A K PD +Y L+LLE+TGI VPGSGFGQ G +H+R TILP E+ +PA+++ Sbjct: 409 AIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVITR 468 Query: 211 FKKFNDSFMDQYQD 170 FK F+++FM +Y+D Sbjct: 469 FKAFHEAFMAEYRD 482
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 153 bits (387), Expect = 3e-37 Identities = 72/134 (53%), Positives = 92/134 (68%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PPK D SY Y AE IL SL RRA+ + FN + CN EGAMY FPQI LPQ+ Sbjct: 349 PPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQK 408 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A++ AK+A K PD +Y L+LLE+TGI VPGSGFGQ G +H R TILP E+ +PA++S Sbjct: 409 AIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISR 468 Query: 211 FKKFNDSFMDQYQD 170 F F+++FM +Y+D Sbjct: 469 FTVFHEAFMSEYRD 482
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 128 bits (321), Expect = 1e-29 Identities = 57/132 (43%), Positives = 86/132 (65%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PP P D S+ ++ AE +++L L +A++ FN + CN +GAMYSFP+++LP R Sbjct: 363 PPAPTDPSFAQFQAEKQAVLAELAAKAKLTEQVFNEAPGISCNPVQGAMYSFPRVQLPPR 422 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A++ A+ G PD+++CL+LLE TGI VPGSGFGQ+EG +H R TILP E + ++ Sbjct: 423 AVERAQELGLAPDMFFCLRLLEETGICVVPGSGFGQREGTYHFRMTILPPLEKLRLLLEK 482 Query: 211 FKKFNDSFMDQY 176 +F+ F +Y Sbjct: 483 LSRFHAKFTLEY 494
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 124 bits (312), Expect = 1e-28 Identities = 57/132 (43%), Positives = 83/132 (62%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PP P + S+ ++ AE + +L L +A++ FN + CN +GAMYSFPQI+LP + Sbjct: 363 PPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQIQLPLK 422 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A+ A+ G PD+++CL LLE TGI VPGSGFGQ+EG +H R TILP E + ++ Sbjct: 423 AVQRAQDLGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRVLLEK 482 Query: 211 FKKFNDSFMDQY 176 + F+ F +Y Sbjct: 483 LRHFHAKFTHEY 494
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 123 bits (308), Expect = 4e-28 Identities = 56/132 (42%), Positives = 82/132 (62%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PP P + S+ ++ AE + +L L +A++ FN + CN +GAMYSFPQ++LP + Sbjct: 363 PPTPSEPSFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQVQLPLK 422 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A+ A+ G PD+++CL LLE TGI VPGSGFGQ+EG +H R TILP E + ++ Sbjct: 423 AVQRAQELGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRLLLEK 482 Query: 211 FKKFNDSFMDQY 176 F+ F +Y Sbjct: 483 LSHFHAKFTHEY 494
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 114 bits (284), Expect = 3e-25 Identities = 60/134 (44%), Positives = 80/134 (59%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PP G+ S+ AE SI E L RA + + FNS + C +GAMY FP+I LP + Sbjct: 462 PPVEGEESFESDQAERNSIHEKLITRAMTLYETFNSLEGIECQKPQGAMYLFPKIDLPFK 521 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A+ A+ PD +YC KLLE+TGI TVPGSGFGQ+ G +HLRTT L + + Sbjct: 522 AVQEARHLELTPDEFYCKKLLESTGICTVPGSGFGQEPGTYHLRTTFLAPGLEW---IKK 578 Query: 211 FKKFNDSFMDQYQD 170 ++ F+ F DQY+D Sbjct: 579 WESFHKEFFDQYRD 592
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 112 bits (280), Expect = 7e-25 Identities = 54/134 (40%), Positives = 81/134 (60%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PP+PGD SY + E I +R RA ++ + F + C +GAMY FP++ LP++ Sbjct: 377 PPQPGDESYEQDHDERLKIFHEMRTRANLLYETFKELEGIECQKPQGAMYLFPRLVLPKK 436 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 A+ ++ G EPD +YC LLE+TGI TVPGSGFGQ+ G +H+RTT L + Sbjct: 437 ALCESERLGIEPDEFYCTSLLESTGICTVPGSGFGQRPGTYHVRTTFLAPGTKW---IQD 493 Query: 211 FKKFNDSFMDQYQD 170 +K+F+ F +Y++ Sbjct: 494 WKEFHQDFFSKYRN 507
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 97.4 bits (241), Expect = 2e-20 Identities = 51/133 (38%), Positives = 76/133 (57%) Frame = -3 Query: 571 PPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQR 392 PPKPGD SY + E I E+LR + + + +G + V C GAMY P + LP++ Sbjct: 376 PPKPGDPSYDLFIKEVDEIHEALRLQCRQLYEGTKRMKRVSCLEPHGAMYLHPSVSLPEK 435 Query: 391 AMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSS 212 + AK+ +PD +Y ++LL+ +GI VPGSGFGQ EG +H+R T L + + Sbjct: 436 LITTAKAQKIQPDEFYAIELLKRSGICVVPGSGFGQPEGDYHIRITFLAKGTE---YIER 492 Query: 211 FKKFNDSFMDQYQ 173 F K ++ MD Y+ Sbjct: 493 FVKAHNEIMDLYE 505
>AATB2_RHIME (Q06191) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 46.6 bits (109), Expect = 5e-05 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Frame = -3 Query: 523 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDV 350 K ES +RR ++ +G N+ + C EGA Y+F R + +GK E D Sbjct: 302 KERTESFQRRRNLVVNGLNAIEGLDCRVPEGAFYTFSGCAGVARRV---TPSGKRIESDT 358 Query: 349 YYCLKLLEATGISTVPGSGFG 287 +C LLE + ++ VPGS FG Sbjct: 359 DFCAYLLEDSHVAVVPGSAFG 379
>AAT_SULTO (Q972A2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 399 Score = 45.8 bits (107), Expect = 9e-05 Identities = 30/115 (26%), Positives = 54/115 (46%) Frame = -3 Query: 529 ESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDV 350 E K ++ ++R IM + + + + ++GA Y FP I ++ K A Sbjct: 290 EVKEMISLFKKRRDIMYEELKKIKGIQVHKSQGAFYMFPFIG------EILKKANLSVKD 343 Query: 349 YYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 185 + LKL+E G++T+PG F + G +R + E+D+ + K+F D M Sbjct: 344 F-SLKLIEEKGVTTIPGEVFPLEVGKDFVRLSFAVKEDDIREGIKRMKEFIDMLM 397
>AATB1_RHIME (P58350) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 43.5 bits (101), Expect = 4e-04 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -3 Query: 523 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDV 350 K ES +RR ++ +G N+ + C EGA Y+F + +GK + D Sbjct: 302 KERTESFQRRRDLVVNGLNAIDGLDCRVPEGAFYTFSGC---AGVLGKVTPSGKRIKTDT 358 Query: 349 YYCLKLLEATGISTVPGSGFG 287 +C LLE ++ VPGS FG Sbjct: 359 DFCAYLLEDAHVAVVPGSAFG 379
>AAT_RHILP (O86459) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 400 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = -3 Query: 529 ESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EP 356 E+K I E R ++ N + +VC EGA Y +P + + +GK E Sbjct: 293 ENKKIFEG---RRDLVVSMLNQAKGIVCPVPEGAFYVYPSCK---GLIGKTAPSGKVIET 346 Query: 355 DVYYCLKLLEATGISTVPGSGFG 287 D + +LLE+ G++ V GS FG Sbjct: 347 DEDFVSELLESEGVAVVHGSAFG 369
>AAT_BACST (Q59228) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 38.1 bits (87), Expect = 0.018 Identities = 28/92 (30%), Positives = 38/92 (41%) Frame = -3 Query: 511 ESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKL 332 ++ +R I+ D C +GA Y FP R + A AG + L Sbjct: 294 QAFEQRLNIIYDKLVQIPGFTCVKPQGAFYLFPNAR------EAAAMAGCRTVDEFVAAL 347 Query: 331 LEATGISTVPGSGFGQKEGVFHLRTTILPAEE 236 LE ++ VPGSGFG + V T L A E Sbjct: 348 LEEAKVALVPGSGFGAPDNVRLSYATSLDALE 379
>AAT_STRVG (Q60013) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 397 Score = 37.4 bits (85), Expect = 0.031 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Frame = -3 Query: 499 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEP--DVYYCLKLLE 326 RR Q M N V C EGA Y++P + + + + GK P V +L+ Sbjct: 297 RRRQTMVKMLNEIDGVFCPTPEGAFYAYPSV----KELLGKEIRGKRPQSSVELAALILD 352 Query: 325 ATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKK 203 ++ VPG FG +LR + +ED+ +S +K Sbjct: 353 EVEVAVVPGEAFGTPG---YLRLSYALGDEDLVEGVSRIQK 390
>AAT1_BACSU (P53001) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 37.4 bits (85), Expect = 0.031 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = -3 Query: 448 CNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGV 272 C EGA Y FP A + A+S G + + LLE ++ VPGSGFG E V Sbjct: 315 CVKPEGAFYLFPN------AKEAAQSCGFKDVDEFVKALLEEEKVAIVPGSGFGSPENV 367
>AAT_SYNY3 (Q55128) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 389 Score = 36.6 bits (83), Expect = 0.052 Identities = 20/84 (23%), Positives = 43/84 (51%) Frame = -3 Query: 523 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYY 344 ++++++ R Q++ +G N + C +GA Y F +D+AK+ + + Sbjct: 291 ETMVKAFTERRQVIVEGINQIAGLSCPNPKGAFYVF---------VDIAKTGLNSLE--F 339 Query: 343 CLKLLEATGISTVPGSGFGQKEGV 272 +LLE+ ++ +PG+ FG + V Sbjct: 340 SARLLESHQVAVIPGAAFGADDCV 363
>AATA_RHIME (Q02635) Aspartate aminotransferase A (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 35.0 bits (79), Expect = 0.15 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = -3 Query: 511 ESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSA--GK--EPDVYY 344 E + R ++ N + + C EGA Y +P A + K+A GK E D + Sbjct: 296 EIFQGRRDLVVSMLNQAKGISCPTPEGAFYVYPSC-----AGLIGKTAPSGKVIETDEDF 350 Query: 343 CLKLLEATGISTVPGSGFG 287 +LLE G++ V GS FG Sbjct: 351 VSELLETEGVAVVHGSAFG 369
>AAT_SULAC (Q4J8X2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/113 (18%), Positives = 49/113 (43%) Frame = -3 Query: 523 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYY 344 K ++++ ++R +M + + N ++GA Y FP + ++ + +G + Sbjct: 293 KKMIDTFKKRRDVMYSELKKIKGIQVNKSQGAFYMFPYLG------EILRKSGMSTK-DF 345 Query: 343 CLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 185 + L++ G+ T+PG F G +R + E + + +F + M Sbjct: 346 SVNLIKEKGVVTIPGEVFPLDAGKEFVRLSFAVDENVIKEGVQRMSEFINQLM 398
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = -2 Query: 350 LLLPQASGSHWNIHCSRLRFWSERRGVPSEDNDPA 246 +L P +SGSH I S L SE +PSED DPA Sbjct: 20 ILDPGSSGSHVEISESSLESDSEADSLPSEDLDPA 54
>AAT_MYCTU (P63498) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 1.7 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -3 Query: 469 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 290 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 289 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 188 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>AAT_MYCBO (P63499) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 1.7 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -3 Query: 469 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 290 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 289 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 188 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>YDT4_SCHPO (O14209) Hypothetical aminotransferase C6B12.04c (EC 2.6.1.-)| Length = 421 Score = 30.8 bits (68), Expect = 2.9 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 7/131 (5%) Frame = -3 Query: 559 GDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYS---FPQIRLPQRA 389 G+ Y E KS S ++R +I+ F+ + +G+ Y+ F +++LP+ Sbjct: 295 GEAEKHNYYEEYKS---SYKKRFEILAKAFDQLE-IPYTIPDGSYYTMANFSKLKLPKDY 350 Query: 388 MDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGV----FHLRTTILPAEEDMPAI 221 + A + D C +L+ G++T+P + F E +LR E + Sbjct: 351 PFPEEIANRPRDFKLCYWILKEIGVATIPPTEFYTDEDAPVAENYLRFAFCKTFETLEEA 410 Query: 220 MSSFKKFNDSF 188 +K D F Sbjct: 411 ARRLQKLKDYF 421
>YARA_PROST (P46117) Putative HTH-type transcriptional regulator in aarA| 3'region Length = 282 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -3 Query: 367 GKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILP 245 G PD+ + LKL G ST+ + FGQ E V L +LP Sbjct: 190 GNTPDINHMLKLANKKGCSTIVLTRFGQDEAV-RLADLVLP 229
>THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC| Length = 619 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -3 Query: 415 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 236 PQIR+P R + V +AG+ P + Y + +G T P ++G+ LR + A Sbjct: 35 PQIRVPMREISVHPTAGEPPVIVY-----DPSGPYTDPTVETSIEKGLARLRHEWITARG 89 Query: 235 DMPA 224 D+ A Sbjct: 90 DVEA 93
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 30.0 bits (66), Expect = 4.9 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 186 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 317 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 1369 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 1413 Score = 30.0 bits (66), Expect = 4.9 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 186 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 317 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 917 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 961 Score = 29.6 bits (65), Expect = 6.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 237 SSAGRIVVLRWNTPSF*PKPEPGTVDI 317 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 29.6 bits (65), Expect = 6.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 237 SSAGRIVVLRWNTPSF*PKPEPGTVDI 317 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +3 Query: 426 IAPSVKLQTTLRQLLKPSVIICALLLKDSRIDL 524 IAP LQ L++ LKPS I L+ KD R +L Sbjct: 761 IAPHALLQAVLKRGLKPSCTIIPLMKKDHRDNL 793
>FAS_CHICK (P12276) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.3 bits (64), Expect = 8.3 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +3 Query: 426 IAPSVKLQTTLRQLLKPSVIICALLLKDSRIDL 524 IAP LQ LR+ LKP+ I L+ KD + +L Sbjct: 759 IAPHALLQAILRRTLKPTCTILPLMKKDHKNNL 791
>ATTY_TRYCR (P33447) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 416 Score = 29.3 bits (64), Expect = 8.3 Identities = 23/88 (26%), Positives = 35/88 (39%) Frame = -3 Query: 517 ILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCL 338 I+ + A + + C + GAMY +I D+ K + DV + Sbjct: 314 IVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI-------DLEKYRDIKTDVEFFE 366 Query: 337 KLLEATGISTVPGSGFGQKEGVFHLRTT 254 KLLE + +PG+ F G L TT Sbjct: 367 KLLEEENVQVLPGTIF-HAPGFTRLTTT 393
>POL_HV1Y2 (P35963) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix| protein p17 (MA); Capsid protein p24 (CA); p2 spacer peptide; Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6 pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse trans Length = 1434 Score = 29.3 bits (64), Expect = 8.3 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -3 Query: 541 KYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK 362 K+S+E +RR Q+ NS + +SFPQI L QR + K G+ Sbjct: 446 KFSSEQTRANSPIRRERQVWRRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQ 505 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,813,613 Number of Sequences: 219361 Number of extensions: 1790969 Number of successful extensions: 5118 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5111 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
