Clone Name | rbasd1h08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY245605.1| Avena sativa putative RNA-binding protein mRNA, partial cds Length = 669 Score = 494 bits (249), Expect = e-136 Identities = 312/333 (93%) Strand = Plus / Minus Query: 223 gtgcagcagaatttccattagctgtgttcttctccttctcatcaccgccctgcccctgaa 282 |||| |||||||| |||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 510 gtgctgcagaattcccattagctgcattcttctccttctcatcaccgccctggccttgaa 451 Query: 283 gcggttgttgctttgctctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaa 342 || ||||||||||||||||||||| ||||||||||| || | ||||||||||||||||| Sbjct: 450 gcacttgttgctttgctctcttttcctgcatcaacttttgtcggttctcgtaaaatgcaa 391 Query: 343 agtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaagac 402 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 aatcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaagac 331 Query: 403 cttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 cttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgt 271 Query: 463 tgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccacttga 522 | ||||| ||||||||||||| ||||||||| ||||| ||||| || ||||||||||||| Sbjct: 270 tttccaatgtaatatgcttcaaaatgttgttagggatgtccttgacaatgtgccacttga 211 Query: 523 ttgaaaaacagccattccacttgtcttgttgcc 555 ||||||| ||||||||||||||||||||||||| Sbjct: 210 ttgaaaagcagccattccacttgtcttgttgcc 178
>ref|XM_469739.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2463 Score = 307 bits (155), Expect = 2e-80 Identities = 254/287 (88%) Strand = Plus / Minus Query: 269 gccctgcccctgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgtt 328 |||||| || |||||| |||| ||||| |||||||| || ||||||| ||| |||| ||| Sbjct: 1908 gccctgtccttgaagcagttgctgcttagctctcttctcctgcatcagcttttgccggtt 1849 Query: 329 ctcgtaaaatgcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatctt 388 ||||||||| |||| |||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 1848 ctcgtaaaaaccaaaatcatccaagattgatgtcttgctgatgtggtccttgaaaatctt 1789 Query: 389 gagcatttgaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacagg 448 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1788 gagcatttcaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacagg 1729 Query: 449 cttattgtcattgttgtccaacgtaatatgcttcagaatgttgttggggatatccttcac 508 ||||||||| ||||| ||||| ||||| ||||||| ||||||||||| | |||||| || Sbjct: 1728 cttattgtcgttgttatccaatgtaatgtgcttcaagatgttgttgggtacatccttgac 1669 Query: 509 gatgtgccacttgattgaaaaacagccattccacttgtcttgttgcc 555 | ||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 1668 aacatgccacttgattggaaaacacccattccacttgtcttgttgcc 1622
>dbj|AK068139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C01, full insert sequence Length = 1659 Score = 307 bits (155), Expect = 2e-80 Identities = 254/287 (88%) Strand = Plus / Minus Query: 269 gccctgcccctgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgtt 328 |||||| || |||||| |||| ||||| |||||||| || ||||||| ||| |||| ||| Sbjct: 1096 gccctgtccttgaagcagttgctgcttagctctcttctcctgcatcagcttttgccggtt 1037 Query: 329 ctcgtaaaatgcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatctt 388 ||||||||| |||| |||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 1036 ctcgtaaaaaccaaaatcatccaagattgatgtcttgctgatgtggtccttgaaaatctt 977 Query: 389 gagcatttgaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacagg 448 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 gagcatttcaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacagg 917 Query: 449 cttattgtcattgttgtccaacgtaatatgcttcagaatgttgttggggatatccttcac 508 ||||||||| ||||| ||||| ||||| ||||||| ||||||||||| | |||||| || Sbjct: 916 cttattgtcgttgttatccaatgtaatgtgcttcaagatgttgttgggtacatccttgac 857 Query: 509 gatgtgccacttgattgaaaaacagccattccacttgtcttgttgcc 555 | ||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 856 aacatgccacttgattggaaaacacccattccacttgtcttgttgcc 810
>dbj|AK101299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033J09, full insert sequence Length = 2658 Score = 299 bits (151), Expect = 5e-78 Identities = 253/287 (88%) Strand = Plus / Minus Query: 269 gccctgcccctgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgtt 328 |||||| || |||||| |||| ||||| |||||||| || ||||||| ||| |||| ||| Sbjct: 2099 gccctgtccttgaagcagttgctgcttagctctcttctcctgcatcagcttttgccggtt 2040 Query: 329 ctcgtaaaatgcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatctt 388 ||||||||| |||| |||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 2039 ctcgtaaaaaccaaaatcatccaagattgatgtcttgctgatgtggtccttgaaaatctt 1980 Query: 389 gagcatttgaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacagg 448 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1979 gagcatttcaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacagg 1920 Query: 449 cttattgtcattgttgtccaacgtaatatgcttcagaatgttgttggggatatccttcac 508 ||||||||| ||||| ||||| ||||| ||||||| ||||||||||| | |||||| || Sbjct: 1919 cttattgtcgttgttatccaatgtaatgtgcttcaagatgttgttgggtacatccttgac 1860 Query: 509 gatgtgccacttgattgaaaaacagccattccacttgtcttgttgcc 555 | ||||||||||||| |||||| ||||||||| |||||||||||| Sbjct: 1859 aacatgccacttgattggaaaacacccattccacctgtcttgttgcc 1813
>gb|BT018022.1| Zea mays clone EL01N0529E01.c mRNA sequence Length = 1334 Score = 258 bits (130), Expect = 2e-65 Identities = 247/286 (86%) Strand = Plus / Minus Query: 270 ccctgcccctgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgttc 329 ||||| || |||||| |||| || || || |||||||| ||||||||||| || | ||| Sbjct: 768 ccctggccttgaagcagttgctgattcgccctcttttcctgcatcaacttttggcgattc 709 Query: 330 tcgtaaaatgcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttg 389 |||||||| |||| |||||||||||||| || || | |||||||| ||||||||||| Sbjct: 708 tcgtaaaaaccaaaatcatccaaaattgacgttttagtaacatgttctttgaaaatcttc 649 Query: 390 agcatttgaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggc 449 | ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 648 aacatttcaagaccttgttccagcttaacctcttgtgtgtcacggctgtttgtcacaggc 589 Query: 450 ttattgtcattgttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacg 509 ||||| |||||||| |||| ||||||||||||| | |||||||||| | |||||| || Sbjct: 588 ttattatcattgttatccagtgtaatatgcttcaaagtgttgttgggcacatccttgact 529 Query: 510 atgtgccacttgattgaaaaacagccattccacttgtcttgttgcc 555 ||||||||||||| || |||||| |||||||||||||||||||||| Sbjct: 528 atgtgccacttgagtggaaaacaaccattccacttgtcttgttgcc 483
>gb|AY107947.1| Zea mays PCO070958 mRNA sequence Length = 948 Score = 258 bits (130), Expect = 2e-65 Identities = 247/286 (86%) Strand = Plus / Minus Query: 270 ccctgcccctgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgttc 329 ||||| || |||||| |||| || || || |||||||| ||||||||||| || | ||| Sbjct: 423 ccctggccttgaagcagttgctgattcgccctcttttcctgcatcaacttttggcgattc 364 Query: 330 tcgtaaaatgcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttg 389 |||||||| |||| |||||||||||||| || || | |||||||| ||||||||||| Sbjct: 363 tcgtaaaaaccaaaatcatccaaaattgacgttttagtaacatgttctttgaaaatcttc 304 Query: 390 agcatttgaagaccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggc 449 | ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 303 aacatttcaagaccttgttccagcttaacctcttgtgtgtcacggctgtttgtcacaggc 244 Query: 450 ttattgtcattgttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacg 509 ||||| |||||||| |||| ||||||||||||| | |||||||||| | |||||| || Sbjct: 243 ttattatcattgttatccagtgtaatatgcttcaaagtgttgttgggcacatccttgact 184 Query: 510 atgtgccacttgattgaaaaacagccattccacttgtcttgttgcc 555 ||||||||||||| || |||||| |||||||||||||||||||||| Sbjct: 183 atgtgccacttgagtggaaaacaaccattccacttgtcttgttgcc 138
>ref|XM_470257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 1910 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 1851 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 1850 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 1791 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 1790 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 1731 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||||||||||||| || || | |||||| Sbjct: 1730 ttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaaccattc 1671 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 1670 cacttatcttgttgcc 1655
>gb|DQ083235.1| Oryza sativa (indica cultivar-group) clone 7B8H91 mRNA sequence Length = 863 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 259 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 200 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 199 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 140 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 139 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 80 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||||||||||||| || || | |||||| Sbjct: 79 ttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaaccattc 20 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 19 cacttatcttgttgcc 4
>dbj|AK119641.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F09, full insert sequence Length = 2166 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 1558 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 1499 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 1498 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 1439 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 1438 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 1379 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||||||||||||| || || | |||||| Sbjct: 1378 ttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaaccattc 1319 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 1318 cacttatcttgttgcc 1303
>dbj|AK111578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075E22, full insert sequence Length = 2862 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 2147 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 2088 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 2087 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 2028 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 2027 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 1968 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||||||||||||| || || | |||||| Sbjct: 1967 ttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaaccattc 1908 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 1907 cacttatcttgttgcc 1892
>dbj|AK062076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F04, full insert sequence Length = 1771 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 1059 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 1000 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 999 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 940 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 939 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 880 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||||||||||||| || || | |||||| Sbjct: 879 ttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaaccattc 820 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 819 cacttatcttgttgcc 804
>dbj|AK111489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A14, full insert sequence Length = 2762 Score = 167 bits (84), Expect = 5e-38 Identities = 213/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 2095 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 2036 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 2035 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 1976 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 1975 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 1916 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||| ||||||||| || || | |||||| Sbjct: 1915 ttgagaatattgttgggcacatctttgacaatgcgccacttgagagataaggaaccattc 1856 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 1855 cacttatcttgttgcc 1840
>dbj|AK103405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D05, full insert sequence Length = 1271 Score = 167 bits (84), Expect = 5e-38 Identities = 213/256 (83%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 723 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 664 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||| ||||| || |||||||| ||||| |||||||||| ||||| ||||| || ||| Sbjct: 663 gtcttactgacgtgctccttgaatatcttaagcatttgaatgccttggtcaaggtttacc 604 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 ||||||||||||||||| |||||||| ||||| || |||||||| || | | || ||| Sbjct: 603 tcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatgtgc 544 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||| || || ||||||||||||| || || | |||||| Sbjct: 543 ttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaaccattc 484 Query: 540 cacttgtcttgttgcc 555 ||||| |||||||||| Sbjct: 483 cacttatcttgttgcc 468
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 30488184 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcgttgttatccaatgtaatg 30488125 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||||||| ||||||||||| | |||||| || | ||||||||||||| |||||| ||| Sbjct: 30488124 tgcttcaagatgttgttgggtacatccttgacaacatgccacttgattggaaaacaccca 30488065 Query: 537 ttccacttgtcttgttgcc 555 ||||||||||||||||||| Sbjct: 30488064 ttccacttgtcttgttgcc 30488046 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 279 tgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgttctcgtaaaat 338 |||||| |||| ||||| |||||||| || ||||||| ||| |||| |||||||||||| Sbjct: 30488674 tgaagcagttgctgcttagctctcttctcctgcatcagcttttgccggttctcgtaaaaa 30488615 Query: 339 gcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttga 398 |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||| | Sbjct: 30488614 ccaaaatcatccaagattgatgtcttgctgatgtggtccttgaaaatcttgagcatttca 30488555 Query: 399 agaccttgctcaagcttaacct 420 |||||||||||||||||||||| Sbjct: 30488554 agaccttgctcaagcttaacct 30488533 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 3108704 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 3108763 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaag 412 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| Sbjct: 3108764 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaag 3108816 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 |||||||||||||||||||| |||||||| ||||| || |||||||| || | | || Sbjct: 3108909 acctcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatg 3108968 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||||| ||||| |||||||| | ||| || || ||||||||||||| || || | ||| Sbjct: 3108969 tgcttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaacca 3109028 Query: 537 ttccacttgtcttgttgcc 555 |||||||| |||||||||| Sbjct: 3109029 ttccacttatcttgttgcc 3109047
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 165 bits (83), Expect = 2e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 19757 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcgttgttatccaatgtaatg 19698 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||||||| ||||||||||| | |||||| || | ||||||||||||| |||||| ||| Sbjct: 19697 tgcttcaagatgttgttgggtacatccttgacaacatgccacttgattggaaaacaccca 19638 Query: 537 ttccacttgtcttgttgcc 555 ||||||||||||||||||| Sbjct: 19637 ttccacttgtcttgttgcc 19619 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 279 tgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgttctcgtaaaat 338 |||||| |||| ||||| |||||||| || ||||||| ||| |||| |||||||||||| Sbjct: 20247 tgaagcagttgctgcttagctctcttctcctgcatcagcttttgccggttctcgtaaaaa 20188 Query: 339 gcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttga 398 |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||| | Sbjct: 20187 ccaaaatcatccaagattgatgtcttgctgatgtggtccttgaaaatcttgagcatttca 20128 Query: 399 agaccttgctcaagcttaacct 420 |||||||||||||||||||||| Sbjct: 20127 agaccttgctcaagcttaacct 20106
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 30579606 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcgttgttatccaatgtaatg 30579547 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||||||| ||||||||||| | |||||| || | ||||||||||||| |||||| ||| Sbjct: 30579546 tgcttcaagatgttgttgggtacatccttgacaacatgccacttgattggaaaacaccca 30579487 Query: 537 ttccacttgtcttgttgcc 555 ||||||||||||||||||| Sbjct: 30579486 ttccacttgtcttgttgcc 30579468 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 279 tgaagcggttgttgctttgctctcttttcttgcatcaacttctgcctgttctcgtaaaat 338 |||||| |||| ||||| |||||||| || ||||||| ||| |||| |||||||||||| Sbjct: 30580096 tgaagcagttgctgcttagctctcttctcctgcatcagcttttgccggttctcgtaaaaa 30580037 Query: 339 gcaaagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttga 398 |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||| | Sbjct: 30580036 ccaaaatcatccaagattgatgtcttgctgatgtggtccttgaaaatcttgagcatttca 30579977 Query: 399 agaccttgctcaagcttaacct 420 |||||||||||||||||||||| Sbjct: 30579976 agaccttgctcaagcttaacct 30579955 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 3108815 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 3108874 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaag 412 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| Sbjct: 3108875 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaag 3108927 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 |||||||||||||||||||| |||||||| ||||| || |||||||| || | | || Sbjct: 3109020 acctcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatg 3109079 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||||| ||||| |||||||| | ||| || || ||||||||||||| || || | ||| Sbjct: 3109080 tgcttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaacca 3109139 Query: 537 ttccacttgtcttgttgcc 555 |||||||| |||||||||| Sbjct: 3109140 ttccacttatcttgttgcc 3109158
>gb|AY596615.1| Saccharum officinarum clone SCAGLR1043A01, complete sequence Length = 1547 Score = 145 bits (73), Expect = 2e-31 Identities = 217/265 (81%) Strand = Plus / Plus Query: 291 tgctttgctctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatcc 350 ||||||||| || | |||||||||||||||| | || |||||||| ||||||||||| Sbjct: 688 tgctttgctttcctctcttgcatcaacttctcacgattatcgtaaaagccaaagtcatcc 747 Query: 351 aaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctca 410 | || || ||||| | |||||| ||||||||||||||||||| |||||| ||||||||| Sbjct: 748 agtatggatgtcttccagacatgatccttgaaaatcttgagcacttgaaggccttgctca 807 Query: 411 agcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaac 470 ||||| ||||| ||||| || | ||||||||| || ||||| || |||||||| || | Sbjct: 808 agcttcacctcatgtgtatctctgctgtttgtgactggcttgttttcattgttctcgaga 867 Query: 471 gtaatatgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaa 530 | || |||||||| | | |||| || ||||||||||| ||||||||||||| | ||| Sbjct: 868 atgatgtgcttcagcaagctgtttggaatatccttcacaatgtgccacttgacagggaaa 927 Query: 531 cagccattccacttgtcttgttgcc 555 || ||| |||||||||| ||||||| Sbjct: 928 caaccagtccacttgtcctgttgcc 952
>gb|AY103907.1| Zea mays PCO122604 mRNA sequence Length = 2408 Score = 111 bits (56), Expect = 2e-21 Identities = 206/256 (80%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 ||||| || |||||||||||||| | | ||||||| || |||||||| || | || || Sbjct: 1746 ctcttatcctgcatcaacttctggcggctctcgtagaaggcaaagtcgtcgaggatggaa 1687 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 |||||||||||||| |||||||| ||||||||||| ||||| ||||| || || | | Sbjct: 1686 gtcttgctgacatgatccttgaatatcttgagcatctgaaggccttgttcgaggcgtatc 1627 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 || || ||||| ||||||||||| |||||||| || |||||||| |||| | || ||| Sbjct: 1626 tcctgagtgtcgcggctgtttgtgacaggcttgttctcattgttctccaggatgatgtgc 1567 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | |||||||| ||||||||||| | || || |||| ||| Sbjct: 1566 ttgagaatattgttgggcacgtccttcacaatgtgccacttaacagagaaggagccgttc 1507 Query: 540 cacttgtcttgttgcc 555 |||||||| ||||||| Sbjct: 1506 cacttgtcctgttgcc 1491
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 |||||||| |||||||||||||| | |||||| || || |||||||||||||| || ||| Sbjct: 31717 ctcttttcctgcatcaacttctgacggttctcatagaaagcaaagtcatccaagatggag 31776 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaag 412 ||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||| Sbjct: 31777 gtcttactgacatgctccttgaatatcttaagcatttgaatgccttggtcaag 31829 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 |||||||||||||||||||| |||||||| ||||| || |||||||| || | | || Sbjct: 31922 acctcttgtgtgtcacggctatttgtcactggcttgttctcattgttctctaggatgatg 31981 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||||| ||||| |||||||| | ||| || || ||||||||||||| || || | ||| Sbjct: 31982 tgcttgagaatattgttgggcacatctttgacaatgtgccacttgagagataaggaacca 32041 Query: 537 ttccacttgtcttgttgcc 555 |||||||| |||||||||| Sbjct: 32042 ttccacttatcttgttgcc 32060
>gb|BT016473.1| Zea mays clone Contig306 mRNA sequence Length = 1105 Score = 103 bits (52), Expect = 6e-19 Identities = 205/256 (80%) Strand = Plus / Plus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 ||||| || |||||||||||||| | | |||| || || |||||||| || | || || Sbjct: 627 ctcttatcctgcatcaacttctggcggctctcatagaaggcaaagtcgtcgaggatggaa 686 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 |||||||||||||| |||||||| ||||||||||| ||||| ||||| || || | | Sbjct: 687 gtcttgctgacatgatccttgaatatcttgagcatctgaaggccttgttcgaggcgtatc 746 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaatatgc 479 || || ||||||||||||||||| |||||||| || |||||||| |||| | || ||| Sbjct: 747 tcctgagtgtcacggctgtttgtgacaggcttgttctcattgttctccaggatgatgtgc 806 Query: 480 ttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagccattc 539 || ||||| |||||||| | ||||| || ||||||||||| | || || |||| ||| Sbjct: 807 ttgagaatattgttgggcacgtccttgacaatgtgccacttaacagagaaggagccgttc 866 Query: 540 cacttgtcttgttgcc 555 |||||||| ||||||| Sbjct: 867 cacttgtcctgttgcc 882
>gb|AY596616.1| Saccharum officinarum clone SCCCCL3005B06, complete sequence Length = 2129 Score = 103 bits (52), Expect = 6e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 300 ctcttttcttgcatcaacttctgcctgttctcgtaaaatgcaaagtcatccaaaattgag 359 ||||| || |||||||||||||| | | |||| || || ||||||||||||| || || Sbjct: 1423 ctcttatcctgcatcaacttctggcggctctcatagaaggcaaagtcatccaggatggac 1364 Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 |||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||| | | | Sbjct: 1363 gtcttgctgacatgatccttgaagatcttgagcatctgaaggccttgttcaaggtgtatc 1304 Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 || || ||||||||||| || || |||||||| || |||||||| Sbjct: 1303 tcctgagtgtcacggctattcgtgacaggcttgttctcattgtt 1260
>gb|BT018844.1| Zea mays clone EL01N0554B10.d mRNA sequence Length = 2441 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 342 aagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaaga 401 |||||||||| || || |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1706 aagtcatccaggatggacgtcttgctgacatgctccttgaatatcttgagcatctgaagg 1647 Query: 402 ccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggctt 451 ||||| || || | | |||||| |||||||||||||| || |||||||| Sbjct: 1646 ccttgttctaggtgtatctcttgagtgtcacggctgttcgtgacaggctt 1597
>gb|BT016816.1| Zea mays clone Contig649 mRNA sequence Length = 1830 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 342 aagtcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaaga 401 |||||||||| || || |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1061 aagtcatccaggatggacgtcttgctgacatgctccttgaatatcttgagcatctgaagg 1002 Query: 402 ccttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggctt 451 ||||| || || | | |||||| |||||||||||||| || |||||||| Sbjct: 1001 ccttgttctaggtgtatctcttgagtgtcacggctgttcgtgacaggctt 952
>ref|NM_180247.1| Arabidopsis thaliana unknown protein AT3G13460 transcript variant AT3G13460.2 mRNA, complete cds Length = 2812 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1964 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1905 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1904 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1845 Query: 521 ga 522 || Sbjct: 1844 ga 1843
>ref|NM_001035613.1| Arabidopsis thaliana unknown protein AT3G13460 transcript variant AT3G13460.4 mRNA, complete cds Length = 2818 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1970 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1911 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1910 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1851 Query: 521 ga 522 || Sbjct: 1850 ga 1849
>ref|NM_112192.2| Arabidopsis thaliana unknown protein AT3G13460 transcript variant AT3G13460.1 mRNA, complete cds Length = 2821 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1973 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1914 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1913 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1854 Query: 521 ga 522 || Sbjct: 1853 ga 1852
>ref|NM_001035612.1| Arabidopsis thaliana unknown protein AT3G13460 transcript variant AT3G13460.3 mRNA, complete cds Length = 2847 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1999 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1940 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1939 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1880 Query: 521 ga 522 || Sbjct: 1879 ga 1878
>gb|AY894118.1| Arabidopsis thaliana clone ECT2 unknown mRNA Length = 2490 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1691 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1632 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1631 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1572 Query: 521 ga 522 || Sbjct: 1571 ga 1570
>gb|AY123992.1| Arabidopsis thaliana AT3g13460/MRP15_10 mRNA, complete cds Length = 2736 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1913 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1854 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1853 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1794 Query: 521 ga 522 || Sbjct: 1793 ga 1792
>gb|BT002179.1| Arabidopsis thaliana Unknown protein (At3g13460) mRNA, complete cds Length = 2049 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 401 accttgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcatt 460 ||||||||| | |||||||||||||||||| | |||||| || ||||| || || ||||| Sbjct: 1716 accttgctccaacttaacctcttgtgtgtctctgctgttggtaacaggtttgttctcatt 1657 Query: 461 gttgtccaacgtaatatgcttcagaatgttgttggggatatccttcacgatgtgccactt 520 ||| || || |||||||||||||| | |||| || | ||||||||| || |||||||| Sbjct: 1656 gttctctaaagtaatatgcttcagtaaactgtttggcacatccttcacaatatgccactt 1597 Query: 521 ga 522 || Sbjct: 1596 ga 1595
>ref|XM_483734.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 1824 acctcttgtgtgtcccggctgttggtcacaggtttattatcattgtt 1778
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 27818741 acctcttgtgtgtcccggctgttggtcacaggtttattatcattgtt 27818787
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 73198 acctcttgtgtgtcccggctgttggtcacaggtttattatcattgtt 73244
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 26819 acctcttgtgtgtcccggctgttggtcacaggtttattatcattgtt 26865
>dbj|AK104837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D12, full insert sequence Length = 1345 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 519 acctcttgtgtgtcccggctgttggtcacaggtttattatcattgtt 473
>dbj|AK068463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153A10, full insert sequence Length = 2650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 1824 acctcttgtgtgtcccggctgttggtcacaggtttattatcattgtt 1778
>ref|XM_476753.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2406 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||||| |||||| |||||||||||||| |||| |||||| ||| ||||||| || ||| Sbjct: 1665 gtcttgcagacatggtccttgaaaatcttaagcacttgaagccctggctcaagtttcacc 1606 Query: 420 tc 421 || Sbjct: 1605 tc 1604
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 60.0 bits (30), Expect = 8e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 |||||||||||||| | |||||| || ||||| || || |||||||| || || |||||| Sbjct: 39689 acctcttgtgtgtctctgctgttggtaacaggtttgttctcattgttctctaaagtaata 39748 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttga 522 |||||||| | |||| || | ||||||||| || |||||||||| Sbjct: 39749 tgcttcagtaaactgtttggcacatccttcacaatatgccacttga 39794
>dbj|AK072392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075O16, full insert sequence Length = 2406 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaagcttaacc 419 ||||||| |||||| |||||||||||||| |||| |||||| ||| ||||||| || ||| Sbjct: 1665 gtcttgcagacatggtccttgaaaatcttaagcacttgaagccctggctcaagtttcacc 1606 Query: 420 tc 421 || Sbjct: 1605 tc 1604
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaag 412 ||||||| |||||| |||||||||||||| |||| |||||| ||| ||||||| Sbjct: 3759931 gtcttgcagacatggtccttgaaaatcttaagcacttgaagccctggctcaag 3759983
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 360 gtcttgctgacatgttccttgaaaatcttgagcatttgaagaccttgctcaag 412 ||||||| |||||| |||||||||||||| |||| |||||| ||| ||||||| Sbjct: 104282 gtcttgcagacatggtccttgaaaatcttaagcacttgaagccctggctcaag 104334
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/139 (79%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 ||||| ||||| || || ||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 70243 acctcctgtgtatcccgactgttggtgacaggtttgttctcattgttttccaatgtaatg 70302 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||| ||| | |||||| || | |||||| || ||||||||||| | | ||||||||| Sbjct: 70303 tgcctcaacacgttgttaggaacatccttaacaatgtgccacttcaaaggaaaacagccc 70362 Query: 537 ttccacttgtcttgttgcc 555 ||||||||||||| |||| Sbjct: 70363 atccacttgtcttgctgcc 70381
>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence Length = 106286 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/139 (79%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaacgtaata 476 ||||| ||||| || || ||||| || ||||| || || |||||||| ||||| ||||| Sbjct: 4399 acctcctgtgtatcccgactgttggtgacaggtttgttctcattgttttccaatgtaatg 4340 Query: 477 tgcttcagaatgttgttggggatatccttcacgatgtgccacttgattgaaaaacagcca 536 ||| ||| | |||||| || | |||||| || ||||||||||| | | ||||||||| Sbjct: 4339 tgcctcaacacgttgttaggaacatccttaacaatgtgccacttcaaaggaaaacagccc 4280 Query: 537 ttccacttgtcttgttgcc 555 ||||||||||||| |||| Sbjct: 4279 atccacttgtcttgctgcc 4261
>ref|NM_112143.2| Arabidopsis thaliana unknown protein AT3G13060 transcript variant AT3G13060.2 mRNA, complete cds Length = 2298 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaa 469 ||||| ||||| || || || ||||||||||||||||||||||| ||||| Sbjct: 1615 tcttgggtgtctcgactattagtcacaggcttattgtcattgttttccaa 1566
>ref|NM_180241.1| Arabidopsis thaliana unknown protein AT3G13060 transcript variant AT3G13060.1 mRNA, complete cds Length = 2384 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaa 469 ||||| ||||| || || || ||||||||||||||||||||||| ||||| Sbjct: 1615 tcttgggtgtctcgactattagtcacaggcttattgtcattgttttccaa 1566
>gb|AY070734.1| Arabidopsis thaliana AT3g13060/MGH6_17 mRNA, complete cds Length = 687 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaa 469 ||||| ||||| || || || ||||||||||||||||||||||| ||||| Sbjct: 108 tcttgggtgtctcgactattagtcacaggcttattgtcattgttttccaa 59
>gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis thaliana BAC F21D18 from chromosome I, complete sequence Length = 109367 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 414 ttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||||||||||||||| || ||||| || || |||||||| |||||||| Sbjct: 50478 ttaacctcttgtgtgtctcgactgttggtgaccggcttattctcattgtt 50429
>dbj|AB026645.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGH6 Length = 81020 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 420 tcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtccaa 469 ||||| ||||| || || || ||||||||||||||||||||||| ||||| Sbjct: 73592 tcttgggtgtctcgactattagtcacaggcttattgtcattgttttccaa 73543
>dbj|AB022216.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8 Length = 80167 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttatt 454 |||||||||||||| |||||||| ||||| |||||||| Sbjct: 38895 acctcttgtgtgtctcggctgttggtcactggcttatt 38932
>gb|AY104045.1| Zea mays PCO119540 mRNA sequence Length = 1882 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 411 agcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| ||||| || ||||| | ||| ||||| |||||||||||||||||||| Sbjct: 1107 agcttcacctcctgggtgtccctgctatttgtgacaggcttattgtcattgtt 1055
>ref|NM_112611.2| Arabidopsis thaliana unknown protein AT3G17330 mRNA, complete cds Length = 2405 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 419 ctcttgtgtgtcacggctgtttgtcacaggcttatt 454 |||||||||||| |||||||| ||||| |||||||| Sbjct: 1498 ctcttgtgtgtctcggctgttggtcactggcttatt 1463
>gb|BT025338.1| Arabidopsis thaliana At3g17330 mRNA, complete cds Length = 1788 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 419 ctcttgtgtgtcacggctgtttgtcacaggcttatt 454 |||||||||||| |||||||| ||||| |||||||| Sbjct: 1194 ctcttgtgtgtctcggctgttggtcactggcttatt 1159
>emb|AJ851651.1| Gallus gallus mRNA for hypothetical protein, clone 15d19 Length = 3536 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| |||||||||||| |||||| ||||| || ||||||||||| |||| Sbjct: 1894 acctcctgtgtgtcacgggagtttgtaacaggtttgttgtcattgttctcca 1843
>emb|AJ719437.1| Gallus gallus mRNA for hypothetical protein, clone 2f5 Length = 3528 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| |||||||||||| |||||| ||||| || ||||||||||| |||| Sbjct: 1886 acctcctgtgtgtcacgggagtttgtaacaggtttgttgtcattgttctcca 1835
>ref|NM_001012833.1| Gallus gallus YTH domain family, member 1 (YTHDF1), mRNA Length = 3536 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| |||||||||||| |||||| ||||| || ||||||||||| |||| Sbjct: 1894 acctcctgtgtgtcacgggagtttgtaacaggtttgttgtcattgttctcca 1843
>emb|BX822800.1|CNS0A7C2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2045 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 419 ctcttgtgtgtcacggctgtttgtcacaggcttatt 454 |||||||||||| |||||||| ||||| |||||||| Sbjct: 1253 ctcttgtgtgtctcggctgttggtcactggcttatt 1218
>gb|AY105053.1| Zea mays PCO093351 mRNA sequence Length = 1136 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 500 atccttcacgatgtgccacttgattgaaaaacagccattccacttgtcttgttgcc 555 ||||||||| ||||||||||||| | ||||| ||| |||||||||| ||||||| Sbjct: 1067 atccttcacaatgtgccacttgacagggaaacaaccagtccacttgtcctgttgcc 1012
>ref|XM_473832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| |||||||| | |||||| ||||||||||| || |||||||| Sbjct: 1337 acctcctgtgtgtccctgctgttggtcacaggcttgttttcattgtt 1291
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| |||||||| | |||||| ||||||||||| || |||||||| Sbjct: 125988 acctcctgtgtgtccctgctgttggtcacaggcttgttttcattgtt 125942
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| |||||||| | |||||| ||||||||||| || |||||||| Sbjct: 30858467 acctcctgtgtgtccctgctgttggtcacaggcttgttttcattgtt 30858421
>dbj|AK065298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N16, full insert sequence Length = 2190 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| |||||||| | |||||| ||||||||||| || |||||||| Sbjct: 1467 acctcctgtgtgtccctgctgttggtcacaggcttgttttcattgtt 1421
>dbj|AK062217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B01, full insert sequence Length = 1105 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| |||||||| | |||||| ||||||||||| || |||||||| Sbjct: 368 acctcctgtgtgtccctgctgttggtcacaggcttgttttcattgtt 322
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 ||||| |||||||| | |||||| ||||||||||| || |||||||| Sbjct: 44964 acctcctgtgtgtccctgctgttggtcacaggcttgttttcattgtt 44918
>ref|NM_104425.1| Arabidopsis thaliana unknown protein AT1G55500 mRNA, complete cds Length = 2484 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Minus Query: 345 tcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaagacct 404 ||||||||||| | ||||||||| ||| |||||||||||||| | | | | ||| Sbjct: 2071 tcatccaaaatgcatgtcttgctgttatgctccttgaaaatctttacaaccttcaaaccc 2012 Query: 405 tgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgt 462 ||||| | |||||||||||||||||| | ||||| || ||||| ||||| ||||||| Sbjct: 2011 tgctccaacttaacctcttgtgtgtctctactgttagtaacaggtttattctcattgt 1954
>ref|XM_524248.1| PREDICTED: Pan troglodytes similar to protein phosphatase 1, regulatory (inhibitor) subunit 14A; 17-kDa PKC-potentiated inhibitory protein of PP1; PKC-potentiated inhibitory protein of PP1; 17-KDa protein (LOC468862), mRNA Length = 459 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 170 cgcctcttccccggcagcaggggcgg 195 |||||||||||||||| ||||||||| Sbjct: 171 cgcctcttccccggcaccaggggcgg 146
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 tgcttcggtgcagcagaatttc 237 |||||||||||||||||||||| Sbjct: 4149254 tgcttcggtgcagcagaatttc 4149233
>gb|AY050668.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (PPP1R14A) gene, complete cds Length = 169660 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 170 cgcctcttccccggcagcaggggcgg 195 |||||||||||||||| ||||||||| Sbjct: 54970 cgcctcttccccggcaccaggggcgg 54945
>emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chromosome 14, complete sequence Length = 195351 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 gatgtgccacttgattgaaaaa 530 |||||||||||||||||||||| Sbjct: 144772 gatgtgccacttgattgaaaaa 144793
>gb|AY050425.1| Arabidopsis thaliana At1g55500/T5A14_10 mRNA, complete cds Length = 2484 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Minus Query: 345 tcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaagacct 404 ||||||||||| | ||||||||| ||| |||||||||||||| | | | | ||| Sbjct: 2071 tcatccaaaatgcatgtcttgctgttatgctccttgaaaatctttacaaccttcaaaccc 2012 Query: 405 tgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgt 462 ||||| | |||||||||||||||||| | ||||| || ||||| ||||| ||||||| Sbjct: 2011 tgctccaacttaacctcttgtgtgtctctactgttagtaacaggtttattctcattgt 1954
>gb|AC011479.7| Homo sapiens chromosome 19 clone CTB-102L5, complete sequence Length = 169661 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 170 cgcctcttccccggcagcaggggcgg 195 |||||||||||||||| ||||||||| Sbjct: 54971 cgcctcttccccggcaccaggggcgg 54946
>gb|AF231020.1|AF231020 Homo sapiens hepatocyte growth factor activator inhibitor type 2 gene, 5'-flanking region Length = 905 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 170 cgcctcttccccggcagcaggggcgg 195 |||||||||||||||| ||||||||| Sbjct: 780 cgcctcttccccggcaccaggggcgg 805
>gb|BT002240.1| Arabidopsis thaliana At1g55500/T5A14_10 mRNA, complete cds Length = 1650 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Minus Query: 345 tcatccaaaattgaggtcttgctgacatgttccttgaaaatcttgagcatttgaagacct 404 ||||||||||| | ||||||||| ||| |||||||||||||| | | | | ||| Sbjct: 1520 tcatccaaaatgcatgtcttgctgttatgctccttgaaaatctttacaaccttcaaaccc 1461 Query: 405 tgctcaagcttaacctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgt 462 ||||| | |||||||||||||||||| | ||||| || ||||| ||||| ||||||| Sbjct: 1460 tgctccaacttaacctcttgtgtgtctctactgttagtaacaggtttattctcattgt 1403
>ref|NM_103707.2| Arabidopsis thaliana unknown protein AT1G48110 mRNA, complete cds Length = 3360 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 419 ctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgtt 463 |||||||||||| || ||||| || || |||||||| |||||||| Sbjct: 1566 ctcttgtgtgtctcgactgttggtgaccggcttattctcattgtt 1522
>ref|NM_102561.2| Arabidopsis thaliana unknown protein AT1G27960 mRNA, complete cds Length = 1859 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattg 461 |||||||| ||||| | ||||| || |||||||||||||||||| Sbjct: 1450 acctcttgggtgtctctactgttagtgacaggcttattgtcattg 1406
>gb|AY462711.1| Plasmodium falciparum erythrocyte membrane protein 1 (var) mRNA, partial cds, DBL1alpha region Length = 432 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 acatgttccttgaaaatcttgagcatttg 397 |||||||||| |||||| ||||||||||| Sbjct: 309 acatgttcctcgaaaatattgagcatttg 281
>ref|XM_754683.1| Ustilago maydis 521 hypothetical protein (UM03629.1) partial mRNA Length = 2850 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cgcctcttccccggcagcaggggcg 194 ||||||||| ||||||||||||||| Sbjct: 375 cgcctcttcgccggcagcaggggcg 351
>emb|BX816911.1|CNS0AE13 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZA10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1787 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattg 461 |||||||| ||||| | ||||| || |||||||||||||||||| Sbjct: 1450 acctcttgggtgtctctactgttagtgacaggcttattgtcattg 1406
>emb|BX816269.1|CNS0ADD9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1788 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattg 461 |||||||| ||||| | ||||| || |||||||||||||||||| Sbjct: 1424 acctcttgggtgtctctactgttagtgacaggcttattgtcattg 1380
>emb|BX816655.1|CNS0ADCT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1854 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattg 461 |||||||| ||||| | ||||| || |||||||||||||||||| Sbjct: 1445 acctcttgggtgtctctactgttagtgacaggcttattgtcattg 1401
>gb|BT022109.1| Arabidopsis thaliana At1g27960 mRNA, complete cds Length = 1703 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattg 461 |||||||| ||||| | ||||| || |||||||||||||||||| Sbjct: 1406 acctcttgggtgtctctactgttagtgacaggcttattgtcattg 1362
>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete sequence Length = 126991 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattg 461 |||||||| ||||| | ||||| || |||||||||||||||||| Sbjct: 29287 acctcttgggtgtctctactgttagtgacaggcttattgtcattg 29331
>gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, complete sequence Length = 165176 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gacatgttccttgaaaatctt 388 ||||||||||||||||||||| Sbjct: 157985 gacatgttccttgaaaatctt 158005
>emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2128A3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 103601 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ttcttctccttctcatcaccg 269 ||||||||||||||||||||| Sbjct: 37546 ttcttctccttctcatcaccg 37566
>ref|NM_212713.1| Danio rerio YTH domain family, member 1 (ythdf1), mRNA Length = 2246 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| ||||||||||| ||| ||||| ||||| ||||||||||| |||| Sbjct: 1983 acctcctgtgtgtcacgcgagttggtcacgggcttgttgtcattgttctcca 1932
>ref|NM_192043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1785 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacagg 448 ||||||||||| || | ||||||||||||||| Sbjct: 1442 acctcttgtgtatccctgctgtttgtcacagg 1411
>ref|XM_751342.1| Ustilago maydis 521 hypothetical protein (UM00288.1) partial mRNA Length = 1455 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tgttgttggggatatccttc 506 |||||||||||||||||||| Sbjct: 1117 tgttgttggggatatccttc 1098
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 345 tcatccaaaattgaggtcttgctgacatgttccttgaaaatctt 388 ||||||||||| | ||||||||| ||| |||||||||||||| Sbjct: 48717 tcatccaaaatgcatgtcttgctgttatgctccttgaaaatctt 48760
>emb|CR699252.2|CNS0G2HS Tetraodon nigroviridis full-length cDNA Length = 1104 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tgtgtgtcacggctgtttgtcaca 446 ||||||||| |||||||||||||| Sbjct: 1051 tgtgtgtcagggctgtttgtcaca 1028
>emb|CR696851.2|CNS0G0N3 Tetraodon nigroviridis full-length cDNA Length = 1096 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tgtgtgtcacggctgtttgtcaca 446 ||||||||| |||||||||||||| Sbjct: 1049 tgtgtgtcagggctgtttgtcaca 1026
>emb|CR690011.2|CNS0FVD3 Tetraodon nigroviridis full-length cDNA Length = 1097 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tgtgtgtcacggctgtttgtcaca 446 ||||||||| |||||||||||||| Sbjct: 1043 tgtgtgtcagggctgtttgtcaca 1020
>emb|CR665950.2|CNS0FCTG Tetraodon nigroviridis full-length cDNA Length = 884 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tgtgtgtcacggctgtttgtcaca 446 ||||||||| |||||||||||||| Sbjct: 826 tgtgtgtcagggctgtttgtcaca 803
>emb|CR759927.12| Zebrafish DNA sequence from clone CH211-196C10 in linkage group 8, complete sequence Length = 205716 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| ||||||||||| ||| ||||| ||||| ||||||||||| |||| Sbjct: 200237 acctcctgtgtgtcacgcgagttggtcacgggcttgttgtcattgttctcca 200288
>gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, complete sequence Length = 186318 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gttgttgctttgctctcttt 305 |||||||||||||||||||| Sbjct: 40621 gttgttgctttgctctcttt 40640
>emb|BX324109.8| Zebrafish DNA sequence from clone CH211-212E4, complete sequence Length = 121988 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| ||||||||||| ||| ||||| ||||| ||||||||||| |||| Sbjct: 52536 acctcctgtgtgtcacgcgagttggtcacgggcttgttgtcattgttctcca 52485
>gb|AE011657.1| Xanthomonas axonopodis pv. citri str. 306, section 35 of 469 of the complete genome Length = 10222 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ttcgcctcttccccggcagc 187 |||||||||||||||||||| Sbjct: 4262 ttcgcctcttccccggcagc 4281
>gb|AC007158.10|AC007158 Homo sapiens, clone RP11-90A1, complete sequence Length = 201299 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctgtgttcttctccttctca 263 |||||||||||||||||||| Sbjct: 50146 ctgtgttcttctccttctca 50165
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacagg 448 ||||||||||| || | ||||||||||||||| Sbjct: 27981216 acctcttgtgtatccctgctgtttgtcacagg 27981185
>emb|BX813632.1|CNS0AC7R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB29ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2057 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 345 tcatccaaaattgaggtcttgctgacatgttccttgaaaatctt 388 ||||||||||| | ||||||||| ||| |||||||||||||| Sbjct: 1767 tcatccaaaatgcatgtcttgctgttatgctccttgaaaatctt 1724
>gb|AC154245.2| Mus musculus BAC clone RP24-326A24 from chromosome 14, complete sequence Length = 185892 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gtgctctccttgctcggtgt 214 |||||||||||||||||||| Sbjct: 98184 gtgctctccttgctcggtgt 98203
>gb|AC007092.4| Homo sapiens BAC clone RP11-90D1 from 2, complete sequence Length = 157176 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctgtgttcttctccttctca 263 |||||||||||||||||||| Sbjct: 122693 ctgtgttcttctccttctca 122674
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacagg 448 ||||||||||| || | ||||||||||||||| Sbjct: 167897 acctcttgtgtatccctgctgtttgtcacagg 167866
>dbj|AK121361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123N01, full insert sequence Length = 2761 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacagg 448 ||||||||||| || | ||||||||||||||| Sbjct: 1754 acctcttgtgtatccctgctgtttgtcacagg 1723
>dbj|AK120262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046L18, full insert sequence Length = 2825 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacagg 448 ||||||||||| || | ||||||||||||||| Sbjct: 1818 acctcttgtgtatccctgctgtttgtcacagg 1787
>dbj|AK100018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013144M15, full insert sequence Length = 3048 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacagg 448 ||||||||||| || | ||||||||||||||| Sbjct: 2122 acctcttgtgtatccctgctgtttgtcacagg 2091
>emb|CR792452.7| Zebrafish DNA sequence from clone CH211-198P5 in linkage group 11, complete sequence Length = 77790 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 gtaaaatgcaaagtcatccaaaat 355 ||||||||||||||||| |||||| Sbjct: 49663 gtaaaatgcaaagtcattcaaaat 49686
>gb|BC046885.1| Danio rerio YTH domain family, member 1, mRNA (cDNA clone MGC:55657 IMAGE:3815384), complete cds Length = 2246 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 417 acctcttgtgtgtcacggctgtttgtcacaggcttattgtcattgttgtcca 468 ||||| ||||||||||| ||| ||||| ||||| ||||||||||| |||| Sbjct: 1983 acctcctgtgtgtcacgcgagttggtcacgggcttgttgtcattgttctcca 1932
>emb|Y13909.1|DSY13909 Drosophila subobscura yellow gene, exon 1 and exon 2 Length = 7357 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cattcgaaacctgcccaagt 64 |||||||||||||||||||| Sbjct: 1331 cattcgaaacctgcccaagt 1350 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,429,154 Number of Sequences: 3902068 Number of extensions: 5429154 Number of successful extensions: 109548 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109034 Number of HSP's gapped (non-prelim): 488 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)