ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HIR1_YEAST (P32479) Histone transcription regulator 1 30 7.9
2FMO3_CANFA (Q95LA1) Dimethylaniline monooxygenase [N-oxide-formi... 30 7.9

>HIR1_YEAST (P32479) Histone transcription regulator 1|
          Length = 788

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 627 LPAVVVCAIFYAACKCFCTEINN*KLY 547
           +P V++CAI    CKC+C    N  +Y
Sbjct: 651 IPEVIICAIGSKDCKCWCLASANGSIY 677



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>FMO3_CANFA (Q95LA1) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC|
           1.14.13.8) (Hepatic flavin-containing monooxygenase 3)
           (FMO 3) (Dimethylaniline oxidase 3)
          Length = 531

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
 Frame = +1

Query: 496 PXAPHPFNILIQIHSSKIQFLIIYFGAE----------TLACSIKYSADYNCRQQW 633
           P  P+P +    +H+SK+Q  I  F  E          TL CS+    D++   QW
Sbjct: 69  PDFPYPDDFPNFMHNSKLQEYITVFSKEKNLLKYIQFKTLVCSVNKRPDFSVSGQW 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,219,456
Number of Sequences: 219361
Number of extensions: 1410712
Number of successful extensions: 2806
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2804
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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