Clone Name | rbasd1h02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK061948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E07, full insert sequence Length = 1803 Score = 272 bits (137), Expect = 1e-69 Identities = 277/324 (85%) Strand = Plus / Minus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 1466 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 1407 Query: 284 catgccggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgctt 343 |||||| ||||| ||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1406 catgccagatccaatgcacatggtgacaacaccgaatctgcagtccctgccccggcgctt 1347 Query: 344 catttcgttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccat 403 |||||| |||| ||| || | || |||||| || ||||||||||||||||| || || | Sbjct: 1346 catttcattcagaagagttgcgacgcaccgggcacctgttgcaccaagaggatgtcctag 1287 Query: 404 agcgatggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagca 463 ||||| || |||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 1286 ggcgattgcgcctccattcacgtttacttttgacctgtccagtcccagcttgttgcagca 1227 Query: 464 gtagacaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctc 523 || ||||| || || || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1226 atacacaaactgcgaagcgaaggcctcattcaattcaaacagatcaatgtcttcaatctg 1167 Query: 524 aaggccagcagacttcactgcagc 547 || |||||||||||||||||||| Sbjct: 1166 gagtccagcagacttcactgcagc 1143
>ref|XM_468412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1579 Score = 264 bits (133), Expect = 3e-67 Identities = 276/324 (85%) Strand = Plus / Minus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 1468 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 1409 Query: 284 catgccggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgctt 343 |||||| ||||| ||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1408 catgccagatccaatgcacatggtgacaacaccgaatctgcagtccctgccccggcgctt 1349 Query: 344 catttcgttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccat 403 |||||| |||| ||| || | || |||||| || ||||||||||||||||| || || | Sbjct: 1348 catttcattcagaagagttgcgacgcaccgggcacctgttgcaccaagaggatgtcctag 1289 Query: 404 agcgatggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagca 463 ||||| || |||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 1288 ggcgattgcgcctccattcacgtttacttttgacctgtccagtcccagcttgttgcagca 1229 Query: 464 gtagacaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctc 523 || || || || || || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1228 atacacgaactgcgaagcgaaggcctcattcaattcaaacagatcaatgtcttcaatctg 1169 Query: 524 aaggccagcagacttcactgcagc 547 || |||||||||||||||||||| Sbjct: 1168 gagtccagcagacttcactgcagc 1145
>ref|XM_507050.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.17 patrial mRNA Length = 1582 Score = 264 bits (133), Expect = 3e-67 Identities = 276/324 (85%) Strand = Plus / Minus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 1471 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 1412 Query: 284 catgccggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgctt 343 |||||| ||||| ||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1411 catgccagatccaatgcacatggtgacaacaccgaatctgcagtccctgccccggcgctt 1352 Query: 344 catttcgttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccat 403 |||||| |||| ||| || | || |||||| || ||||||||||||||||| || || | Sbjct: 1351 catttcattcagaagagttgcgacgcaccgggcacctgttgcaccaagaggatgtcctag 1292 Query: 404 agcgatggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagca 463 ||||| || |||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 1291 ggcgattgcgcctccattcacgtttacttttgacctgtccagtcccagcttgttgcagca 1232 Query: 464 gtagacaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctc 523 || || || || || || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1231 atacacgaactgcgaagcgaaggcctcattcaattcaaacagatcaatgtcttcaatctg 1172 Query: 524 aaggccagcagacttcactgcagc 547 || |||||||||||||||||||| Sbjct: 1171 gagtccagcagacttcactgcagc 1148
>gb|AY224469.1| Oryza sativa (japonica cultivar-group) isolate 24733 3-ketoacyl-CoA thiolase-like protein mRNA, complete cds Length = 1347 Score = 264 bits (133), Expect = 3e-67 Identities = 276/324 (85%) Strand = Plus / Minus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 1341 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 1282 Query: 284 catgccggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgctt 343 |||||| ||||| ||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1281 catgccagatccaatgcacatggtgacaacaccgaatctgcagtccctgccccggcgctt 1222 Query: 344 catttcgttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccat 403 |||||| |||| ||| || | || |||||| || ||||||||||||||||| || || | Sbjct: 1221 catttcattcagaagagttgcgacgcaccgggcacctgttgcaccaagaggatgtcctag 1162 Query: 404 agcgatggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagca 463 ||||| || |||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 1161 ggcgattgcgcctccattcacgtttacttttgacctgtccagtcccagcttgttgcagca 1102 Query: 464 gtagacaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctc 523 || || || || || || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1101 atacacgaactgcgaagcgaaggcctcattcaattcaaacagatcaatgtcttcaatctg 1042 Query: 524 aaggccagcagacttcactgcagc 547 || |||||||||||||||||||| Sbjct: 1041 gagtccagcagacttcactgcagc 1018
>dbj|AK069768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030K20, full insert sequence Length = 2045 Score = 250 bits (126), Expect = 4e-63 Identities = 275/324 (84%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || | || || || || Sbjct: 1469 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaaca--gctgctgcccc 1412 Query: 284 catgccggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgctt 343 |||||| ||||| ||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1411 catgccagatccaatgcacatggtgacaacaccgaatctgcagtccctgccccggcgctt 1352 Query: 344 catttcgttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccat 403 |||||| |||| ||| || | || |||||| || ||||||||||||||||| || || | Sbjct: 1351 catttcattcagaagagttgcgacgcaccgggcacctgttgcaccaagaggatgtcctag 1292 Query: 404 agcgatggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagca 463 ||||| || |||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 1291 ggcgattgcgcctccattcacgtttacttttgacctgtccagtcccagcttgttgcagca 1232 Query: 464 gtagacaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctc 523 || || || || || || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1231 atacacgaactgcgaagcgaaggcctcattcaattcaaacagatcaatgtcttcaatctg 1172 Query: 524 aaggccagcagacttcactgcagc 547 || |||||||||||||||||||| Sbjct: 1171 gagtccagcagacttcactgcagc 1148
>gb|BT018838.1| Zea mays clone EL01N0552G11.d mRNA sequence Length = 1681 Score = 192 bits (97), Expect = 8e-46 Identities = 264/320 (82%) Strand = Plus / Minus Query: 230 cacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcccatgcc 289 |||||||||||| | ||||||| ||| ||||||||||| || || || || ||||| || Sbjct: 1436 cacgttggagagtccatccaccgcgtctccccgctcgaacacagctgctgcccccattcc 1377 Query: 290 ggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 |||||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 1376 agatccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 1317 Query: 350 gttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccatagcgat 409 || | ||| || | | ||||| || ||||||||||| |||||||| || | || || Sbjct: 1316 atttagaagagtagccacacaccgggcacctgttgcacccagagggtgtccaagggcaat 1257 Query: 410 ggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagcagtagac 469 || |||||||| || || || || || | ||| || |||| |||||||||||| ||||| Sbjct: 1256 cgcgcctccatttacatttactttagaacggtccagccccaacttgttgcagcaatagac 1197 Query: 470 aaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctcaaggcc 529 ||| |||||||| ||||||||||||| |||||| ||||| |||||| ||||||||||||| Sbjct: 1196 aaactgagaggcgaaggcctcattcagttcaaacagatcaatgtcgccaatctcaaggcc 1137 Query: 530 agcagacttcactgcagcag 549 ||||||||||| ||||||| Sbjct: 1136 tgcagacttcacagcagcag 1117
>gb|BT017030.1| Zea mays clone EL01N0202B07.c mRNA sequence Length = 839 Score = 184 bits (93), Expect = 2e-43 Identities = 251/304 (82%) Strand = Plus / Minus Query: 246 tccaccgagtcgccccgctcgaagacggccgccgcgcccatgccggatccgatgcacatg 305 ||||||| ||| ||||||||||| || || || || ||||| || |||||||| |||||| Sbjct: 630 tccaccgcgtctccccgctcgaacacagctgctgcccccattccagatccgatacacatg 571 Query: 306 gtcacgaccccgaatctgcagtccctgccccggcgcttcatttcgttcanaagggtcgag 365 || || || || ||||||||||| |||||||||||||||||||| || | ||| || | Sbjct: 570 gtgacaacaccaaatctgcagtctctgccccggcgcttcatttcatttagaagagtagcc 511 Query: 366 atgcaccgtgcgcctgttgcaccaagagggtgccccatagcgatggcacctccattcacg 425 | ||||| || ||||||||||| |||||||| || | || || || |||||||| || Sbjct: 510 acacaccgggcacctgttgcacccagagggtgtccaagggcaatcgcgcctccatttaca 451 Query: 426 ttcacctttgacctgtcgagtcccagcttgttgcagcagtagacaaattgagaggcaaag 485 || || || || | ||| || |||| |||||||||||| |||||||| |||||||| ||| Sbjct: 450 tttactttagaacggtccagccccaacttgttgcagcaatagacaaactgagaggcgaag 391 Query: 486 gcctcattcaattcaaagagatcgatgtcgtcaatctcaaggccagcagacttcactgca 545 |||||||||| |||||| ||||| |||||| ||||||||||||| ||||||||||| ||| Sbjct: 390 gcctcattcagttcaaacagatcaatgtcgccaatctcaaggcctgcagacttcacagca 331 Query: 546 gcag 549 |||| Sbjct: 330 gcag 327
>gb|AY103539.1| Zea mays PCO103478 mRNA sequence Length = 2010 Score = 176 bits (89), Expect = 5e-41 Identities = 262/320 (81%) Strand = Plus / Minus Query: 230 cacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcccatgcc 289 |||||||||||| | ||||||| ||| ||||||||||| || || || || ||||| || Sbjct: 1653 cacgttggagagtccatccaccgcgtctccccgctcgaacacagctgctgcccccattcc 1594 Query: 290 ggatccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 |||||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 1593 agatccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 1534 Query: 350 gttcanaagggtcgagatgcaccgtgcgcctgttgcaccaagagggtgccccatagcgat 409 || | ||| || | | ||||| || ||||||||||| |||||||| || | || || Sbjct: 1533 atttagaagagtagccacacaccgggcacctgttgcacccagagggtgtccaagggcaat 1474 Query: 410 ggcacctccattcacgttcacctttgacctgtcgagtcccagcttgttgcagcagtagac 469 || |||||||| || || || || || | ||| || |||| |||||||||||| ||||| Sbjct: 1473 cgcgcctccatttacatttactttggaacggtccagccccaacttgttgcagcaatagac 1414 Query: 470 aaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctcaaggcc 529 ||| |||||||| ||||||||||||| |||||| | ||| ||||| ||||||||||||| Sbjct: 1413 aaactgagaggcgaaggcctcattcagttcaaacaaatcaatgtctccaatctcaaggcc 1354 Query: 530 agcagacttcactgcagcag 549 ||||||||||| ||||||| Sbjct: 1353 tgcagacttcacagcagcag 1334
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 378 cctgttgcaccaagagggtgccccatagcgatggcacctccattcacgttcacctttgac 437 ||||||||||||||||| || || | ||||| || |||||||||||||| || |||||| Sbjct: 35100366 cctgttgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttgac 35100425 Query: 438 ctgtcgagtcccagcttgttgcagca 463 ||||| |||||||||||||||||||| Sbjct: 35100426 ctgtccagtcccagcttgttgcagca 35100451 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 297 atgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttcgttcana 356 ||||||||||| || || ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 35100140 atgcacatggtgacaacaccgaatctgcagtccctgccccggcgcttcatttcattcaga 35100199 Query: 357 ag 358 || Sbjct: 35100200 ag 35100201 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 487 cctcattcaattcaaagagatcgatgtcgtcaatctcaaggccagcagacttcactgcag 546 |||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||| Sbjct: 35100563 cctcattcaattcaaacagatcaatgtcttcaatctggagtccagcagacttcactgcag 35100622 Query: 547 c 547 | Sbjct: 35100623 c 35100623 Score = 40.1 bits (20), Expect = 7.4 Identities = 59/72 (81%) Strand = Plus / Plus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 35099948 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 35100007 Query: 284 catgccggatcc 295 |||||| ||||| Sbjct: 35100008 catgccagatcc 35100019
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 378 cctgttgcaccaagagggtgccccatagcgatggcacctccattcacgttcacctttgac 437 ||||||||||||||||| || || | ||||| || |||||||||||||| || |||||| Sbjct: 160707 cctgttgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttgac 160766 Query: 438 ctgtcgagtcccagcttgttgcagca 463 ||||| |||||||||||||||||||| Sbjct: 160767 ctgtccagtcccagcttgttgcagca 160792 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 297 atgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttcgttcana 356 ||||||||||| || || ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 160481 atgcacatggtgacaacaccgaatctgcagtccctgccccggcgcttcatttcattcaga 160540 Query: 357 ag 358 || Sbjct: 160541 ag 160542 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 487 cctcattcaattcaaagagatcgatgtcgtcaatctcaaggccagcagacttcactgcag 546 |||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||| Sbjct: 160904 cctcattcaattcaaacagatcaatgtcttcaatctggagtccagcagacttcactgcag 160963 Query: 547 c 547 | Sbjct: 160964 c 160964 Score = 40.1 bits (20), Expect = 7.4 Identities = 59/72 (81%) Strand = Plus / Plus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 160289 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 160348 Query: 284 catgccggatcc 295 |||||| ||||| Sbjct: 160349 catgccagatcc 160360
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 378 cctgttgcaccaagagggtgccccatagcgatggcacctccattcacgttcacctttgac 437 ||||||||||||||||| || || | ||||| || |||||||||||||| || |||||| Sbjct: 73529 cctgttgcaccaagaggatgtcctagggcgattgcgcctccattcacgtttacttttgac 73588 Query: 438 ctgtcgagtcccagcttgttgcagca 463 ||||| |||||||||||||||||||| Sbjct: 73589 ctgtccagtcccagcttgttgcagca 73614 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 297 atgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttcgttcana 356 ||||||||||| || || ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 73303 atgcacatggtgacaacaccgaatctgcagtccctgccccggcgcttcatttcattcaga 73362 Query: 357 ag 358 || Sbjct: 73363 ag 73364 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 487 cctcattcaattcaaagagatcgatgtcgtcaatctcaaggccagcagacttcactgcag 546 |||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||| Sbjct: 73726 cctcattcaattcaaacagatcaatgtcttcaatctggagtccagcagacttcactgcag 73785 Query: 547 c 547 | Sbjct: 73786 c 73786 Score = 40.1 bits (20), Expect = 7.4 Identities = 59/72 (81%) Strand = Plus / Plus Query: 224 gtggcgcacgttggagagctcgtccaccgagtcgccccgctcgaagacggccgccgcgcc 283 |||||||||||| |||| | ||| |||||||| |||||||| || || || || || || Sbjct: 73111 gtggcgcacgtttgagaattggtcgaccgagtcaccccgctcaaacacagctgctgcccc 73170 Query: 284 catgccggatcc 295 |||||| ||||| Sbjct: 73171 catgccagatcc 73182
>gb|AY104346.1| Zea mays PCO082145 mRNA sequence Length = 1817 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 456 ttgcagcagtagacaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcg 515 ||||||||||||||| | ||||| ||||| |||||||| | ||| || |||||||| || Sbjct: 1317 ttgcagcagtagacatactgagatgcaaaagcctcattgatttcgaaaagatcgatatca 1258 Query: 516 tcaatctcaaggccagcagacttcactgc 544 || |||| ||||||||||| |||||||| Sbjct: 1257 tccatctgaaggccagcagctttcactgc 1229
>gb|DQ207713.1| Zea mays cultivar inbred line Mo17 IDP460 marker Length = 562 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 216 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 161
>gb|DQ207712.1| Zea mays cultivar B73 IDP460 marker Length = 689 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 271 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 216 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 559 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 503 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 502 gagagtccatccaccgcgtctccccgctcgaa 471
>gb|AF498487.1| Zea mays cultivar C_9 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 412 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 347 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 402
>gb|AF498486.1| Zea mays cultivar D_9 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 470 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 410 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 465 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AF498485.1| Zea mays cultivar D_6 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 470 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 410 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 465 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AF498484.1| Zea mays cultivar F_1 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 412 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 347 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 402
>gb|AF498483.1| Zea mays cultivar Mo17 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 412 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 347 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 402
>gb|AF498482.1| Zea mays cultivar D_7 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 470 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 410 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 465 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AF498481.1| Zea mays cultivar Wf9Ht acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 412 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 347 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 402
>gb|AF498480.1| Zea mays cultivar B84 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 411 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 346 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 401
>gb|AF498478.1| Zea mays cultivar DE811 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 411 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 346 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 401
>gb|AF498477.1| Zea mays cultivar 684 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 464 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 404 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 459 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 116 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 172 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 173 gagagtccatccaccgcgtctccccgctcgaa 204
>gb|AF498476.1| Zea mays cultivar D71-4HT acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 469 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 404 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 459 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 116 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 172 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 173 gagagtccatccaccgcgtctccccgctcgaa 204
>gb|AF498475.1| Zea mays cultivar H99 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 407 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 342 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 397
>gb|AF498474.1| Zea mays cultivar IVANA acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 473 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 408 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 463 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AF498473.1| Zea mays cultivar CO109 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 407 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 342 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 397
>gb|AF498472.1| Zea mays cultivar B73 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 468 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 408 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 463 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AF498471.1| Zea mays cultivar F_2 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498470.1| Zea mays cultivar G_1 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498469.1| Zea mays cultivar B_6 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 464 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 404 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 459 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 116 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 172 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 173 gagagtccatccaccgcgtctccccgctcgaa 204
>gb|AF498468.1| Zea mays cultivar H_4 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498467.1| Zea mays cultivar F_4 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 403 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 338 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 393
>gb|AF498466.1| Zea mays cultivar F_3 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 407 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 342 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 397
>gb|AF498465.1| Zea mays cultivar F_5 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498464.1| Zea mays cultivar H_5 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498463.1| Zea mays cultivar H_3 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 468 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 408 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 463 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AF498462.1| Zea mays cultivar J40 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498461.1| Zea mays cultivar 647 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498460.1| Zea mays cultivar B_1 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498459.1| Zea mays cultivar F_6 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 345 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 400
>gb|AF498458.1| Zea mays cultivar C_5 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 407 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 342 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 397
>gb|AF498457.1| Zea mays cultivar H_1 acetyl-CoA C-acyltransferase-like protein gene, 3' UTR and partial cds Length = 407 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 342 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 397
>gb|AF323027.1| Zea mays transposon Acrobat, complete sequence; putative gloyoxysomal beta-ketoacyl-thiolase gene, partial sequence Length = 484 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| |||||||||||||||||||| Sbjct: 408 ccgatacacatggtgacaacaccaaatctgcagtctctgccccggcgcttcatttc 463
>emb|X75329.1|MITHMF5 M.indica (Manila) THMF5 mRNA for 3-ketoacyl-coA thiolase B Length = 1305 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 447 cccagcttgttgcagcagtagacaaattgagaggcaaaggcctcattcaattcaaagaga 506 ||||||||||| | ||| || |||||||| || ||||| |||||||| | |||||| ||| Sbjct: 1142 cccagcttgttacggcaatatacaaattgggatgcaaatgcctcatttatttcaaaaaga 1083 Query: 507 tcgatgtcgtcaatctcaaggccagcagacttcactgcagc 547 || || || |||| ||||| ||||||| ||| |||||||| Sbjct: 1082 tcaatatcatcaagttcaagaccagcagccttaactgcagc 1042
>gb|AF498479.1| Zea mays cultivar H60 acetyl-CoA C-acyltransferase-like protein-like protein gene, 3' UTR and partial cds Length = 411 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 294 ccgatgcacatggtcacgaccccgaatctgcagtccctgccccggcgcttcatttc 349 ||||| |||||||| || || || ||||||||||| ||||| |||||||||||||| Sbjct: 346 ccgatacacatggtgacaacaccaaatctgcagtctctgcctcggcgcttcatttc 401 Score = 44.1 bits (22), Expect = 0.48 Identities = 75/92 (81%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 177 cgcctctacttcgcagcatccttggacaggaagttgtgcgactggatgtggcgcacgttg 236 ||||||||||||||| ||||| ||||| || || || | |||||||| | ||||||| Sbjct: 120 cgcctctacttcgca---tccttagacagaaaattatgtgcctggatgtccctcacgttg 176 Query: 237 gagagctcgtccaccgagtcgccccgctcgaa 268 ||||| | ||||||| ||| ||||||||||| Sbjct: 177 gagagtccatccaccgcgtctccccgctcgaa 208
>gb|AE012302.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 210 of 460 of the complete genome Length = 12828 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 274 ccgccgcgcccatgccggatccgatgcacatggt 307 |||||||||||||||||| |||||||||||||| Sbjct: 8326 ccgccgcgcccatgccggtgccgatgcacatggt 8359
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 274 ccgccgcgcccatgccggatccgatgcacatggt 307 |||||||||||||||||| |||||||||||||| Sbjct: 2656679 ccgccgcgcccatgccggtgccgatgcacatggt 2656646
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 480 gcaaaggcctcattcaattcaaagagatcgatgtcgtcaat 520 |||||||| || |||| ||||||||||||||| |||||||| Sbjct: 2920012 gcaaaggcttcgttcacttcaaagagatcgatatcgtcaat 2919972
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 263 ctcgaagacggccgccgcgcccatgccggatccgatgcacatggt 307 |||||||| | | |||||||||||||||| |||||||||||||| Sbjct: 144678 ctcgaagatgccggccgcgcccatgccggtgccgatgcacatggt 144722
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 263 ctcgaagacggccgccgcgcccatgccggatccgatgcacatggt 307 |||||||| | | |||||||||||||||| |||||||||||||| Sbjct: 55663 ctcgaagatgccggccgcgcccatgccggtgccgatgcacatggt 55707
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 393 gggtgccccatagcgatggcacctccattcacgttcacctt 433 ||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 2993658 gggtggcccatggcgatggcaccgccattcacgttgacctt 2993618
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 375 gcgcctgttgcaccaagagggtgccccatagcgatggcacctccattcacgttcac 430 |||||||| ||||| || ||||| ||||||||||| || || ||||| |||||||| Sbjct: 1891154 gcgcctgtcgcacccagtgggtgacccatagcgatagcgccaccattgacgttcac 1891099
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 276 gccgcgcccatgccggatccgatgcacatggt 307 |||||||||||||||| |||||||||||||| Sbjct: 2662239 gccgcgcccatgccggtgccgatgcacatggt 2662208 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cggccgccgcgcccatgccg 290 |||||||||||||||||||| Sbjct: 2905345 cggccgccgcgcccatgccg 2905364
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 276 gccgcgcccatgccggatccgatgcacatggt 307 |||||||||||||||| |||||||||||||| Sbjct: 2682764 gccgcgcccatgccggtgccgatgcacatggt 2682733 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cggccgccgcgcccatgccg 290 |||||||||||||||||||| Sbjct: 2927071 cggccgccgcgcccatgccg 2927090
>ref|XM_753769.1| Ustilago maydis 521 hypothetical protein (UM02715.1) partial mRNA Length = 1212 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 384 gcaccaagagggtgccccatagcgatggcacctcc 418 ||||| |||||||| ||||||||||| |||||||| Sbjct: 1085 gcaccgagagggtggcccatagcgatagcacctcc 1051
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 260 ccgctcgaagacggccgccgcgcccatgccggatccgatgcacatggtcac 310 |||||||| || | |||||||||||||||||| |||| |||||| ||||| Sbjct: 647525 ccgctcgatgatgcccgccgcgcccatgccggtgccgacgcacatcgtcac 647475
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 276 gccgcgcccatgccggatccgatgcacatggtcac 310 |||||||||||||||| ||||||||||| ||||| Sbjct: 2945204 gccgcgcccatgccggtgccgatgcacatcgtcac 2945238
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 261 cgctcgaagacggccgccgcgcccatgccggatccgatgcacatggtcac 310 ||||||| || | |||||||||||||||||| |||| |||||| ||||| Sbjct: 215144 cgctcgatgatgcccgccgcgcccatgccggtgccgacgcacatcgtcac 215095
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 261 cgctcgaagacggccgccgcgcccatgccggatccgatgcacatggtcac 310 ||||||| || | |||||||||||||||||| |||| |||||| ||||| Sbjct: 897433 cgctcgatgatgcccgccgcgcccatgccggtgccgacgcacatcgtcac 897384
>gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, complete sequence Length = 186496 Score = 44.1 bits (22), Expect = 0.48 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 514 cgtcaatctcaaggccagcagacttcactgcagc 547 ||||||||||| ||||||||||||| |||||||| Sbjct: 136271 cgtcaatctca-ggccagcagacttgactgcagc 136303
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 261 cgctcgaagacggccgccgcgcccatgccggatccgatgcacatggtcac 310 ||||||| || | |||||||||||||||||| |||| |||||| ||||| Sbjct: 739816 cgctcgatgatgcccgccgcgcccatgccggtgccgacgcacatcgtcac 739767
>emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in linkage group 5, complete sequence Length = 205761 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 actaataatacatgccttttttatgc 45 |||||||||||||| ||||||||||| Sbjct: 151338 actaataatacatggcttttttatgc 151363
>emb|BX957226.10| Zebrafish DNA sequence from clone CH211-110P13 in linkage group 5, complete sequence Length = 149414 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 actaataatacatgccttttttatgc 45 |||||||||||||| ||||||||||| Sbjct: 137731 actaataatacatggcttttttatgc 137756
>gb|AE011836.1| Xanthomonas axonopodis pv. citri str. 306, section 214 of 469 of the complete genome Length = 10879 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 274 ccgccgcgcccatgccggatccgatgcacatggt 307 |||| ||||||||||||| |||||||||||||| Sbjct: 9586 ccgcagcgcccatgccggtcccgatgcacatggt 9619
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 261 cgctcgaagacggccgccgcgcccatgccggatccgatgcacatggtcac 310 |||||||| | | |||||||||||||||||| |||| |||||| ||||| Sbjct: 510978 cgctcgaaaatgcccgccgcgcccatgccggtgccgacgcacatcgtcac 510929 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ccgatgcacatggtcacgacc 314 ||||||||||||||||||||| Sbjct: 1888327 ccgatgcacatggtcacgacc 1888307
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 274 ccgccgcgcccatgccggatccgatgcacatggt 307 ||||||||||||||||| |||||||||||||| Sbjct: 2478579 ccgccgcgcccatgccgccgccgatgcacatggt 2478546 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 274 ccgccgcgcccatgccggatccgatgcacatggtcacgac 313 ||||||||||||||||| || | ||||||||||||||| Sbjct: 1430485 ccgccgcgcccatgccgccgcccacgcacatggtcacgac 1430446
>gb|AC165954.3| Mus musculus BAC clone RP23-450F5 from chromosome 12, complete sequence Length = 184826 Score = 44.1 bits (22), Expect = 0.48 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 514 cgtcaatctcaaggccagcagacttcactgcagc 547 ||||||||||| ||||||||||||| |||||||| Sbjct: 56303 cgtcaatctca-ggccagcagacttgactgcagc 56335
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gcgcccatgccggatccgatgcacatggt 307 ||||||||||||| |||||||||||||| Sbjct: 2351908 gcgcccatgccggtaccgatgcacatggt 2351936
>emb|AJ719616.1| Gallus gallus mRNA for hypothetical protein, clone 4j7 Length = 1776 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 cccatagcgatggcacctccattcacgtt 427 |||| |||||||||||||||||| ||||| Sbjct: 1074 cccacagcgatggcacctccattgacgtt 1046
>ref|NM_001006571.1| Gallus gallus acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) (ACAA2), mRNA Length = 1776 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 cccatagcgatggcacctccattcacgtt 427 |||| |||||||||||||||||| ||||| Sbjct: 1074 cccacagcgatggcacctccattgacgtt 1046
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 aggcaaaggcctcattcaattcaaa 502 |||||||||||||||||| |||||| Sbjct: 771224 aggcaaaggcctcattcatttcaaa 771200
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0501E09 Length = 150604 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 aggcaaaggcctcattcaattcaaa 502 |||||||||||||||||| |||||| Sbjct: 56563 aggcaaaggcctcattcatttcaaa 56539
>dbj|AP005591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584E12 Length = 159071 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 aggcaaaggcctcattcaattcaaa 502 |||||||||||||||||| |||||| Sbjct: 143765 aggcaaaggcctcattcatttcaaa 143741
>gb|AF002013.1|AF002013 Alcaligenes sp. SH-69 beta-ketothiolase (phaA) gene, complete cds Length = 1433 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 393 gggtgccccatagcgatggcacctccattcacgttcacctt 433 ||||| || ||||||||||| || ||||||||||| ||||| Sbjct: 1119 gggtggccgatagcgatggcgccgccattcacgttgacctt 1079
>ref|NM_196831.1| Oryza sativa (japonica cultivar-group) putative thiolase (OSJNBa0018F16.7), mRNA Length = 1778 Score = 40.1 bits (20), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 331 tgccccggcgcttcatttcgttcanaagggt 361 ||||||| |||||||||||||| | |||||| Sbjct: 1321 tgccccgtcgcttcatttcgttgagaagggt 1291
>ref|XM_365693.1| Magnaporthe grisea 70-15 hypothetical protein (MG02395.4) partial mRNA Length = 6021 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 aagttgtgcgactggatgtg 226 |||||||||||||||||||| Sbjct: 4337 aagttgtgcgactggatgtg 4356
>gb|BT012930.1| Lycopersicon esculentum clone 114093R, mRNA sequence Length = 1732 Score = 40.1 bits (20), Expect = 7.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 468 acaaattgagaggcaaaggcctcattcaattcaaagagatcgatgtcgtcaatctcaagg 527 |||||||| || ||||| |||||||| | ||||||||||| || || |||| |||||| Sbjct: 1234 acaaattgtgatgcaaatgcctcatttatctcaaagagatcaatatcttcaagttcaagg 1175 Query: 528 ccagcaga 535 || ||||| Sbjct: 1174 cctgcaga 1167
>gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosome 8, complete sequence Length = 178649 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 tctgcagtccctgccccggc 339 |||||||||||||||||||| Sbjct: 158357 tctgcagtccctgccccggc 158338
>emb|X64522.1|BLCIFIL B.lanceolatum mRNA for cytoplasmic intermediate filament protein Length = 2117 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgttggagagctcgtccacc 251 |||||||||||||||||||| Sbjct: 669 cgttggagagctcgtccacc 650
>emb|AL596184.9| Human DNA sequence from clone CTD-2552G1 on chromosome 6, complete sequence Length = 65978 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gtgcactaataatacatgcc 35 |||||||||||||||||||| Sbjct: 18564 gtgcactaataatacatgcc 18545
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 259 cccgctcgaagacggccgccgcgcccatgccggatccgatgcacatggtcac 310 |||||||||| || |||| ||||||||||||| |||| |||||| ||||| Sbjct: 1361518 cccgctcgaacactcccgctgcgcccatgccggtgccgacgcacatcgtcac 1361569
>gb|U00043.1| Caenorhabditis elegans cosmid T26A5, complete sequence Length = 28100 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aaaaattattcttctgctgt 104 |||||||||||||||||||| Sbjct: 21667 aaaaattattcttctgctgt 21686
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 331 tgccccggcgcttcatttcgttcanaagggt 361 ||||||| |||||||||||||| | |||||| Sbjct: 143835 tgccccgtcgcttcatttcgttgagaagggt 143805
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 40.1 bits (20), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Plus Query: 331 tgccccggcgcttcatttcgttcanaagggt 361 ||||||| |||||||||||||| | |||||| Sbjct: 93137 tgccccgtcgcttcatttcgttgagaagggt 93167
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tgagaggcaaaggcctcatt 493 |||||||||||||||||||| Sbjct: 3063131 tgagaggcaaaggcctcatt 3063112
>gb|AC098839.3| Genomic sequence for Mus musculus, clone RP23-469C2, complete sequence Length = 192470 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ctccattcacgttcaccttt 434 |||||||||||||||||||| Sbjct: 156721 ctccattcacgttcaccttt 156740
>gb|AY038061.1| Gossypium hirsutum 3-ketoacyl-CoA thiolase mRNA, complete cds Length = 640 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 516 tcaatctcaaggccagcagacttcactgcagc 547 ||||||||||| || |||||||| |||||||| Sbjct: 175 tcaatctcaagacctgcagacttgactgcagc 144
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 331 tgccccggcgcttcatttcgttcanaagggt 361 ||||||| |||||||||||||| | |||||| Sbjct: 16264946 tgccccgtcgcttcatttcgttgagaagggt 16264916
>dbj|AK072460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121H13, full insert sequence Length = 1808 Score = 40.1 bits (20), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 331 tgccccggcgcttcatttcgttcanaagggt 361 ||||||| |||||||||||||| | |||||| Sbjct: 1471 tgccccgtcgcttcatttcgttgagaagggt 1441
>gb|AC113951.13| Mus musculus chromosome 8, clone RP24-161A21, complete sequence Length = 166298 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 tctgcagtccctgccccggc 339 |||||||||||||||||||| Sbjct: 19729 tctgcagtccctgccccggc 19710
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.4 Identities = 28/31 (90%) Strand = Plus / Minus Query: 331 tgccccggcgcttcatttcgttcanaagggt 361 ||||||| |||||||||||||| | |||||| Sbjct: 16273187 tgccccgtcgcttcatttcgttgagaagggt 16273157
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 attcttctgctgtgggtctg 111 |||||||||||||||||||| Sbjct: 96280 attcttctgctgtgggtctg 96261 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,806,102 Number of Sequences: 3902068 Number of extensions: 3806102 Number of successful extensions: 70348 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 69251 Number of HSP's gapped (non-prelim): 1083 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)