ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1g23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 391 e-105
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 391 e-105
3emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 391 e-105
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 385 e-103
5dbj|AK065945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 385 e-103
7emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 385 e-103
8ref|NM_102886.1| Arabidopsis thaliana unknown protein AT1G31470 ... 58 4e-05
9ref|NM_102885.2| Arabidopsis thaliana unknown protein AT1G31460 ... 58 4e-05
10gb|AC027135.6|AC027135 Arabidopsis thaliana chromosome 1 BAC T8E... 58 4e-05
11gb|BT020457.1| Arabidopsis thaliana At5g45275 mRNA, complete cds 48 0.037
12ref|NM_203157.1| Arabidopsis thaliana unknown protein AT5G45275 ... 48 0.037
13gb|BT020278.1| Arabidopsis thaliana At5g45275 mRNA, complete cds 48 0.037
14emb|AL583830.7| Human DNA sequence from clone RP11-172L10 on chr... 48 0.037
15gb|AC099563.3| Homo sapiens chromosome 1 clone RP11-323K10, comp... 48 0.037
16emb|BX832700.1|CNS0A13F Arabidopsis thaliana Full-length cDNA Co... 48 0.037
17dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.037
18ref|NM_111029.3| Arabidopsis thaliana unknown protein AT3G01630 ... 42 2.3
19gb|AC149544.1| Populus trichocarpa clone Pop1-69J1, complete seq... 42 2.3
20gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC... 42 2.3
21emb|BX927415.8| Zebrafish DNA sequence from clone CH211-1B13 in ... 42 2.3
22dbj|AK126050.1| Homo sapiens cDNA FLJ44062 fis, clone TESTI4035602 42 2.3
23gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome... 42 2.3
24gb|AC003036.1|AC003036 Homo sapiens Xp22 PAC RPCI1-108M6 (Roswel... 42 2.3
25gb|BT004270.1| Arabidopsis thaliana clone RAFL15-43-P08 (R50091)... 42 2.3
26gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome... 40 9.0
27gb|AC124462.2| Mus musculus BAC clone RP24-146O4 from chromosome... 40 9.0
28gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete s... 40 9.0
29ref|XM_499645.1| Yarrowia lipolytica CLIB122, YALI0A01155g predi... 40 9.0
30emb|AM050263.1| Bombyx mori mRNA for putative H3K9 methyltransfe... 40 9.0
31emb|AL512791.3|CNS07EFF Human chromosome 14 DNA sequence BAC R-4... 40 9.0
32emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-4... 40 9.0
33emb|CT030150.14| Mouse DNA sequence from clone RP23-414I13 on ch... 40 9.0
34emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 9.0

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  391 bits (197), Expect = e-105
 Identities = 371/429 (86%)
 Strand = Plus / Minus

                                                                          
Query: 199    tcttgttctcaagaatagggctatgcttgatgccaagcccagcaatgtgatgcaacccca 258
              |||||||||||||||||||  |||||||||  |||| || || |||||||| ||||||||
Sbjct: 348070 tcttgttctcaagaataggattatgcttgacaccaaccctaggaatgtgatacaacccca 348011

                                                                          
Query: 259    cacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccgt 318
              ||| ||||||||| ||||||||||||| |  |||||||| || | ||| ||||||| | |
Sbjct: 348010 cacgaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaatcat 347951

                                                                          
Query: 319    gccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcggc 378
              |||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| ||
Sbjct: 347950 gccattgtggttgtctattactgacatctttaggccatttgcatcatacactagggcagc 347891

                                                                          
Query: 379    aatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttcac 438
              |||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| 
Sbjct: 347890 aatctgaccatagagaagtgatccaagagggatgttggtgatgaggatgttatggttcat 347831

                                                                          
Query: 439    accgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatgaa 498
               || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 347830 gccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatgaa 347771

                                                                          
Query: 499    acctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaattt 558
               ||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 347770 gcctgagcttaggccaattagcgctgttcctgctaccagagtgtttacatcatgcaattt 347711

                                                                          
Query: 559    ccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtccg 618
              |||||||| |||||| || | ||||||||| |||||||| || |||||||||||||||||
Sbjct: 347710 ccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtccg 347651

                       
Query: 619    agcaaatga 627
              |||||||||
Sbjct: 347650 agcaaatga 347642



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  391 bits (197), Expect = e-105
 Identities = 371/429 (86%)
 Strand = Plus / Minus

                                                                          
Query: 199    tcttgttctcaagaatagggctatgcttgatgccaagcccagcaatgtgatgcaacccca 258
              |||||||||||||||||||  |||||||||  |||| || || |||||||| ||||||||
Sbjct: 348070 tcttgttctcaagaataggattatgcttgacaccaaccctaggaatgtgatacaacccca 348011

                                                                          
Query: 259    cacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccgt 318
              ||| ||||||||| ||||||||||||| |  |||||||| || | ||| ||||||| | |
Sbjct: 348010 cacgaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaatcat 347951

                                                                          
Query: 319    gccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcggc 378
              |||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| ||
Sbjct: 347950 gccattgtggttgtctattactgacatctttaggccatttgcatcatacactagggcagc 347891

                                                                          
Query: 379    aatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttcac 438
              |||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| 
Sbjct: 347890 aatctgaccatagagaagtgatccaagagggatgttggtgatgaggatgttatggttcat 347831

                                                                          
Query: 439    accgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatgaa 498
               || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 347830 gccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatgaa 347771

                                                                          
Query: 499    acctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaattt 558
               ||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 347770 gcctgagcttaggccaattagcgctgttcctgctaccagagtgtttacatcatgcaattt 347711

                                                                          
Query: 559    ccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtccg 618
              |||||||| |||||| || | ||||||||| |||||||| || |||||||||||||||||
Sbjct: 347710 ccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtccg 347651

                       
Query: 619    agcaaatga 627
              |||||||||
Sbjct: 347650 agcaaatga 347642



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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score =  391 bits (197), Expect = e-105
 Identities = 371/429 (86%)
 Strand = Plus / Minus

                                                                         
Query: 199   tcttgttctcaagaatagggctatgcttgatgccaagcccagcaatgtgatgcaacccca 258
             |||||||||||||||||||  |||||||||  |||| || || |||||||| ||||||||
Sbjct: 81121 tcttgttctcaagaataggattatgcttgacaccaaccctaggaatgtgatacaacccca 81062

                                                                         
Query: 259   cacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccgt 318
             ||| ||||||||| ||||||||||||| |  |||||||| || | ||| ||||||| | |
Sbjct: 81061 cacgaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaatcat 81002

                                                                         
Query: 319   gccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcggc 378
             |||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| ||
Sbjct: 81001 gccattgtggttgtctattactgacatctttaggccatttgcatcatacactagggcagc 80942

                                                                         
Query: 379   aatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttcac 438
             |||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| 
Sbjct: 80941 aatctgaccatagagaagtgatccaagagggatgttggtgatgaggatgttatggttcat 80882

                                                                         
Query: 439   accgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatgaa 498
              || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 80881 gccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatgaa 80822

                                                                         
Query: 499   acctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaattt 558
              ||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 80821 gcctgagcttaggccaattagcgctgttcctgctaccagagtgtttacatcatgcaattt 80762

                                                                         
Query: 559   ccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtccg 618
             |||||||| |||||| || | ||||||||| |||||||| || |||||||||||||||||
Sbjct: 80761 ccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtccg 80702

                      
Query: 619   agcaaatga 627
             |||||||||
Sbjct: 80701 agcaaatga 80693



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  385 bits (194), Expect = e-103
 Identities = 368/426 (86%)
 Strand = Plus / Minus

                                                                          
Query: 199    tcttgttctcaagaatagggctatgcttgatgccaagcccagcaatgtgatgcaacccca 258
              |||||||||||||||||||  |||||||||  |||| ||||| |||||||| ||||||||
Sbjct: 344500 tcttgttctcaagaataggattatgcttgacaccaaccccaggaatgtgatacaacccca 344441

                                                                          
Query: 259    cacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccgt 318
              ||||||||||||| ||||||||||||| |  |||||||| || | ||| ||||||||| |
Sbjct: 344440 cacaaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaaccat 344381

                                                                          
Query: 319    gccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcggc 378
              |||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| ||
Sbjct: 344380 gccattgcggttgtctattactgacatctttaggccatttgcatcatacactagggcagc 344321

                                                                          
Query: 379    aatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttcac 438
              |||||| || ||||| ||||| ||||||||||| ||||||||||||||||||||||||| 
Sbjct: 344320 aatctgaccgtagagaagtgatccaagagggatgttggtgatgaggatgttatggttcat 344261

                                                                          
Query: 439    accgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatgaa 498
               || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 344260 gccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatgaa 344201

                                                                          
Query: 499    acctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaattt 558
               ||||||||||| |||||||  || |||||||||| ||||||||||||||| ||||||||
Sbjct: 344200 gcctgagcttagaccaattagtgctgttcctgctaccagagtgtttacatcatgcaattt 344141

                                                                          
Query: 559    ccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtccg 618
              |||||||| |||||| || | ||||||||| |||||||| || |||||||||||||||||
Sbjct: 344140 ccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtccg 344081

                    
Query: 619    agcaaa 624
              ||||||
Sbjct: 344080 agcaaa 344075



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>dbj|AK065945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F17, full
            insert sequence
          Length = 2088

 Score =  385 bits (194), Expect = e-103
 Identities = 396/462 (85%), Gaps = 1/462 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcttgttctcaagaatagggctatgcttgatgccaagcccagcaa-tgtgatgcaacccc 257
            |||||||||||||||||||  |||||||||  |||| ||||| || |||||| |||||||
Sbjct: 1766 tcttgttctcaagaataggattatgcttgacaccaaccccaggaaatgtgatacaacccc 1707

                                                                        
Query: 258  acacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccg 317
            |||||||||||||| ||||||||||||| |  |||||||| || | ||| ||||||||| 
Sbjct: 1706 acacaaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaacca 1647

                                                                        
Query: 318  tgccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcgg 377
            ||||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| |
Sbjct: 1646 tgccattgcggttgtctattactgacatctttaggccatttgcatcatacactagggcag 1587

                                                                        
Query: 378  caatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttca 437
            ||||||| || ||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 1586 caatctgaccgtagagaagtgatccaagagggatgttggtgatgaggatgttatggttca 1527

                                                                        
Query: 438  caccgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatga 497
              || ||||| ||||||||||||||||| || |||||||||||||| ||||| |||||||
Sbjct: 1526 tgccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatga 1467

                                                                        
Query: 498  aacctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaatt 557
            | ||||||||||| |||||||  || |||||||||| ||||||||||||||| |||||||
Sbjct: 1466 agcctgagcttagaccaattagtgctgttcctgctaccagagtgtttacatcatgcaatt 1407

                                                                        
Query: 558  tccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtcc 617
            ||||||||| |||||| || | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 1406 tccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtcc 1347

                                                      
Query: 618  gagcaaatgacaccctcccgtgaaggaagtcagggagtgcag 659
            ||||||| || ||| ||| | |||||||||| || |||||||
Sbjct: 1346 gagcaaacgaaaccttcctgcgaaggaagtctggaagtgcag 1305



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  385 bits (194), Expect = e-103
 Identities = 368/426 (86%)
 Strand = Plus / Minus

                                                                          
Query: 199    tcttgttctcaagaatagggctatgcttgatgccaagcccagcaatgtgatgcaacccca 258
              |||||||||||||||||||  |||||||||  |||| ||||| |||||||| ||||||||
Sbjct: 344500 tcttgttctcaagaataggattatgcttgacaccaaccccaggaatgtgatacaacccca 344441

                                                                          
Query: 259    cacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccgt 318
              ||||||||||||| ||||||||||||| |  |||||||| || | ||| ||||||||| |
Sbjct: 344440 cacaaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaaccat 344381

                                                                          
Query: 319    gccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcggc 378
              |||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| ||
Sbjct: 344380 gccattgcggttgtctattactgacatctttaggccatttgcatcatacactagggcagc 344321

                                                                          
Query: 379    aatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttcac 438
              |||||| || ||||| ||||| ||||||||||| ||||||||||||||||||||||||| 
Sbjct: 344320 aatctgaccgtagagaagtgatccaagagggatgttggtgatgaggatgttatggttcat 344261

                                                                          
Query: 439    accgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatgaa 498
               || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 344260 gccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatgaa 344201

                                                                          
Query: 499    acctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaattt 558
               ||||||||||| |||||||  || |||||||||| ||||||||||||||| ||||||||
Sbjct: 344200 gcctgagcttagaccaattagtgctgttcctgctaccagagtgtttacatcatgcaattt 344141

                                                                          
Query: 559    ccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtccg 618
              |||||||| |||||| || | ||||||||| |||||||| || |||||||||||||||||
Sbjct: 344140 ccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtccg 344081

                    
Query: 619    agcaaa 624
              ||||||
Sbjct: 344080 agcaaa 344075



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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 164143

 Score =  385 bits (194), Expect = e-103
 Identities = 368/426 (86%)
 Strand = Plus / Minus

                                                                         
Query: 199   tcttgttctcaagaatagggctatgcttgatgccaagcccagcaatgtgatgcaacccca 258
             |||||||||||||||||||  |||||||||  |||| ||||| |||||||| ||||||||
Sbjct: 51818 tcttgttctcaagaataggattatgcttgacaccaaccccaggaatgtgatacaacccca 51759

                                                                         
Query: 259   cacaaagaatgtgtttgagtagcacttcgcacccatgcacactatcatggtgtcaaccgt 318
             ||||||||||||| ||||||||||||| |  |||||||| || | ||| ||||||||| |
Sbjct: 51758 cacaaagaatgtggttgagtagcactttggccccatgcaaaccaccatagtgtcaaccat 51699

                                                                         
Query: 319   gccagtgagtttgtccagtaccgtactcttcaatccatttgcatcatataccagggcggc 378
             |||| || | ||||| | ||| |   |||| |  |||||||||||||| || ||||| ||
Sbjct: 51698 gccattgcggttgtctattactgacatctttaggccatttgcatcatacactagggcagc 51639

                                                                         
Query: 379   aatctgtccatagaggagtgagccaagagggatattggtgatgaggatgttatggttcac 438
             |||||| || ||||| ||||| ||||||||||| ||||||||||||||||||||||||| 
Sbjct: 51638 aatctgaccgtagagaagtgatccaagagggatgttggtgatgaggatgttatggttcat 51579

                                                                         
Query: 439   accgatgctatttggtccaaagagctcggatgtcactgacactgccgcagcgaagatgaa 498
              || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct: 51578 gccaatgctgtttggtccaaagagctcagaggtcactgacactgctgcagcaaagatgaa 51519

                                                                         
Query: 499   acctgagcttaggccaattaacgccgttcctgctatcagagtgtttacatcgtgcaattt 558
              ||||||||||| |||||||  || |||||||||| ||||||||||||||| ||||||||
Sbjct: 51518 gcctgagcttagaccaattagtgctgttcctgctaccagagtgtttacatcatgcaattt 51459

                                                                         
Query: 559   ccacattaagaagaaagcaactggcatgggcaccaacgctgccgcaagccaccctgtccg 618
             |||||||| |||||| || | ||||||||| |||||||| || |||||||||||||||||
Sbjct: 51458 ccacattaggaagaacgccattggcatgggaaccaacgcagctgcaagccaccctgtccg 51399

                   
Query: 619   agcaaa 624
             ||||||
Sbjct: 51398 agcaaa 51393



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>ref|NM_102886.1| Arabidopsis thaliana unknown protein AT1G31470 mRNA, complete cds
          Length = 1641

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgtcact 475
            |||||||| ||||| ||||| ||||| | |||||| ||||||||||| || ||||| |  
Sbjct: 1367 gtgatgagaatgttgtggttaacacctacgctattgggtccaaagagatcagatgttatg 1308

                                         
Query: 476  gacactgccgcagcgaagatgaaacctga 504
            || ||||| || ||||| |||||||||||
Sbjct: 1307 gagactgcggctgcgaatatgaaacctga 1279



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>ref|NM_102885.2| Arabidopsis thaliana unknown protein AT1G31460 mRNA, complete cds
          Length = 1824

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                       
Query: 416 gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgtcact 475
           |||||||| ||||| ||||| ||||| | |||||| ||||||||||| || ||||| |  
Sbjct: 154 gtgatgagaatgttgtggttaacacctacgctattgggtccaaagagatcagatgttatg 95

                                        
Query: 476 gacactgccgcagcgaagatgaaacctga 504
           || ||||| || ||||| |||||||||||
Sbjct: 94  gagactgcggctgcgaatatgaaacctga 66



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>gb|AC027135.6|AC027135 Arabidopsis thaliana chromosome 1 BAC T8E3 genomic sequence, complete
             sequence
          Length = 80139

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                         
Query: 416   gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgtcact 475
             |||||||| ||||| ||||| ||||| | |||||| ||||||||||| || ||||| |  
Sbjct: 25807 gtgatgagaatgttgtggttaacacctacgctattgggtccaaagagatcagatgttatg 25866

                                          
Query: 476   gacactgccgcagcgaagatgaaacctga 504
             || ||||| || ||||| |||||||||||
Sbjct: 25867 gagactgcggctgcgaatatgaaacctga 25895



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>gb|BT020457.1| Arabidopsis thaliana At5g45275 mRNA, complete cds
          Length = 1713

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgt 471
            |||||||||||||| ||||| || || | |||||| |||||||| ||||| |||||
Sbjct: 1463 gtgatgaggatgttgtggttaaccccaacgctattgggtccaaaaagctcagatgt 1408



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>ref|NM_203157.1| Arabidopsis thaliana unknown protein AT5G45275 mRNA, complete cds
          Length = 1924

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgt 471
            |||||||||||||| ||||| || || | |||||| |||||||| ||||| |||||
Sbjct: 1603 gtgatgaggatgttgtggttaaccccaacgctattgggtccaaaaagctcagatgt 1548



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>gb|BT020278.1| Arabidopsis thaliana At5g45275 mRNA, complete cds
          Length = 1862

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgt 471
            |||||||||||||| ||||| || || | |||||| |||||||| ||||| |||||
Sbjct: 1560 gtgatgaggatgttgtggttaaccccaacgctattgggtccaaaaagctcagatgt 1505



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>emb|AL583830.7| Human DNA sequence from clone RP11-172L10 on chromosome 1 Contains the
             5' end of a variant of the KCNK2 gene for potassium
             channel subfamily K member 2 and a translocase of inner
             mitochondrial membrane 17 homolog A (yeast) (TIMM17A)
             pseudogene, complete sequence
          Length = 151469

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 97    gacttcagaacagtgaggaacaaa 120
             ||||||||||||||||||||||||
Sbjct: 95361 gacttcagaacagtgaggaacaaa 95384



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>gb|AC099563.3| Homo sapiens chromosome 1 clone RP11-323K10, complete sequence
          Length = 91282

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 97    gacttcagaacagtgaggaacaaa 120
             ||||||||||||||||||||||||
Sbjct: 57944 gacttcagaacagtgaggaacaaa 57921



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>emb|BX832700.1|CNS0A13F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH90ZF06 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1885

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgt 471
            |||||||||||||| ||||| || || | |||||| |||||||| ||||| |||||
Sbjct: 1564 gtgatgaggatgttgtggttaaccccaacgctattgggtccaaaaagctcagatgt 1509



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>dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15
          Length = 62052

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 416   gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcggatgt 471
             |||||||||||||| ||||| || || | |||||| |||||||| ||||| |||||
Sbjct: 16184 gtgatgaggatgttgtggttaaccccaacgctattgggtccaaaaagctcagatgt 16239



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>ref|NM_111029.3| Arabidopsis thaliana unknown protein AT3G01630 mRNA, complete cds
          Length = 1875

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcgga 468
            |||||||||||||| ||||| |||||||  || ||  |||||||||| |||||
Sbjct: 1449 gtgatgaggatgttctggttgacaccgacactgttgcgtccaaagagttcgga 1397



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>gb|AC149544.1| Populus trichocarpa clone Pop1-69J1, complete sequence
          Length = 94430

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                         
Query: 407   gggatattggtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcg 466
             |||||||||||||| || ||||| || || ||||| |  |||||||| ||||| ||||| 
Sbjct: 21488 gggatattggtgataagaatgttgtgattgacacctacactatttggcccaaatagctca 21547

                                                      
Query: 467   gatgtcactgacactgccgcagcgaagatgaaacctgagct 507
             || || | ||| ||||| || || |||||||| || |||||
Sbjct: 21548 gaagttattgaaactgctgcggcaaagatgaacccagagct 21588



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>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence,
             complete sequence
          Length = 105543

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 416   gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcgga 468
             |||||||||||||| ||||| |||||||  || ||  |||||||||| |||||
Sbjct: 60678 gtgatgaggatgttctggttgacaccgacactgttgcgtccaaagagttcgga 60626



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>emb|BX927415.8| Zebrafish DNA sequence from clone CH211-1B13 in linkage group 1,
             complete sequence
          Length = 202881

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   gccagtgagtttgtccagtac 339
             |||||||||||||||||||||
Sbjct: 35746 gccagtgagtttgtccagtac 35766



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>dbj|AK126050.1| Homo sapiens cDNA FLJ44062 fis, clone TESTI4035602
          Length = 5133

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 558 tccacattaagaagaaagcaactgg 582
           |||||||||||||||||| ||||||
Sbjct: 771 tccacattaagaagaaagaaactgg 747



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>gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome 13, complete sequence
          Length = 194915

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 548    tcgtgcaatttccacattaag 568
              |||||||||||||||||||||
Sbjct: 117905 tcgtgcaatttccacattaag 117885



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>gb|AC003036.1|AC003036 Homo sapiens Xp22 PAC RPCI1-108M6 (Roswell Park Cancer Center PAC
             library) complete sequence
          Length = 123203

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 558   tccacattaagaagaaagcaactgg 582
             |||||||||||||||||| ||||||
Sbjct: 58931 tccacattaagaagaaagaaactgg 58955



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>gb|BT004270.1| Arabidopsis thaliana clone RAFL15-43-P08 (R50091) unknown protein
            (At3g01630) mRNA, partial cds
          Length = 1900

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 416  gtgatgaggatgttatggttcacaccgatgctatttggtccaaagagctcgga 468
            |||||||||||||| ||||| |||||||  || ||  |||||||||| |||||
Sbjct: 1448 gtgatgaggatgttctggttgacaccgacactgttgcgtccaaagagttcgga 1396



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>gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome 14, complete sequence
          Length = 207264

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gagttcctttctcaactcaa 144
             ||||||||||||||||||||
Sbjct: 68262 gagttcctttctcaactcaa 68243



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>gb|AC124462.2| Mus musculus BAC clone RP24-146O4 from chromosome 14, complete sequence
          Length = 133903

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gagttcctttctcaactcaa 144
             ||||||||||||||||||||
Sbjct: 82548 gagttcctttctcaactcaa 82529



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>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence
          Length = 128493

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   actcttcaatccatttgcat 362
             ||||||||||||||||||||
Sbjct: 56082 actcttcaatccatttgcat 56101



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>ref|XM_499645.1| Yarrowia lipolytica CLIB122, YALI0A01155g predicted mRNA
          Length = 1227

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 413  ttggtgatgaggatgttatggttc 436
            |||||||||||||||| |||||||
Sbjct: 1142 ttggtgatgaggatgtcatggttc 1165



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>emb|AM050263.1| Bombyx mori mRNA for putative H3K9 methyltransferase (su(var)3-9
            gene)
          Length = 1919

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  tcaatccatttgcatcatat 367
            ||||||||||||||||||||
Sbjct: 1413 tcaatccatttgcatcatat 1394



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>emb|AL512791.3|CNS07EFF Human chromosome 14 DNA sequence BAC R-471B22 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178834

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 399  agccaagagggatattggtgatga 422
            |||||||||||| |||||||||||
Sbjct: 6500 agccaagagggacattggtgatga 6523



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>emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-439L12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197369

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 399    agccaagagggatattggtgatga 422
              |||||||||||| |||||||||||
Sbjct: 154486 agccaagagggacattggtgatga 154509



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>emb|CT030150.14| Mouse DNA sequence from clone RP23-414I13 on chromosome 14, complete
             sequence
          Length = 105716

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gagttcctttctcaactcaa 144
             ||||||||||||||||||||
Sbjct: 48192 gagttcctttctcaactcaa 48173



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 413    ttggtgatgaggatgttatggttc 436
              |||||||||||||||| |||||||
Sbjct: 161762 ttggtgatgaggatgtcatggttc 161785


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,225,980
Number of Sequences: 3902068
Number of extensions: 5225980
Number of successful extensions: 88275
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88113
Number of HSP's gapped (non-prelim): 161
length of query: 659
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 636
effective length of database: 17,143,297,704
effective search space: 10903137339744
effective search space used: 10903137339744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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