ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1g20 |
|---|---|
| Clone Library Name | barley_pub |
>PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 240 bits (612), Expect = 3e-63 Identities = 109/122 (89%), Positives = 119/122 (97%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMG YQPYHLA R+PARGQIHGFRMALWYEHLGMLDDVFQRPES+ECVQKVNRIA+ Sbjct: 691 DSEIAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAE 750 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWD+YSSDDL+QDLPGHLLSYPIGVA+DGVVTELPGME+FPDTRAR+LG KSDY+PPIL Sbjct: 751 KYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGAKSDYMPPIL 810 Query: 247 TT 242 T+ Sbjct: 811 TS 812
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 234 bits (598), Expect = 1e-61 Identities = 109/122 (89%), Positives = 115/122 (94%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMGAYQPYHLA R+PARGQIHGFRM+LWYEHLGML+DVFQRPESVECVQKVN +A+ Sbjct: 691 DSEIAMGAYQPYHLATRQPARGQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAE 750 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSSDDLEQDLPGHLLSYPIGV DG VTELPGME FPDTRAR+LG KSDYLPPIL Sbjct: 751 KYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGNKSDYLPPIL 810 Query: 247 TT 242 TT Sbjct: 811 TT 812
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 220 bits (560), Expect = 3e-57 Identities = 102/122 (83%), Positives = 111/122 (90%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMGAYQP+HLA REPARGQIHGFRMALWYEHLGMLD+ F PES ECV KVNR+AD Sbjct: 687 DSEIAMGAYQPHHLATREPARGQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMAD 746 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSS+ LE+DLPGHLL YPIGVA++G VTELPG E FPDT+AR+LGTKSDYLPPIL Sbjct: 747 KYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGTKSDYLPPIL 806 Query: 247 TT 242 TT Sbjct: 807 TT 808
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 219 bits (557), Expect = 6e-57 Identities = 99/122 (81%), Positives = 111/122 (90%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMG YQPYHLAN +PARGQ++GFRM+LWYEHLGML D FQRPES EC+ KVN+IAD Sbjct: 688 DSEIAMGGYQPYHLANTQPARGQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIAD 747 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSS+ LE+DLPGHLL YPIGVA++G VTELPG EFFPDT+ARILG K+DYLPPIL Sbjct: 748 KYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGAKADYLPPIL 807 Query: 247 TT 242 TT Sbjct: 808 TT 809
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 216 bits (549), Expect = 5e-56 Identities = 96/122 (78%), Positives = 109/122 (89%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMG YQPYHL+ R+PARGQIHGFRM+LWYEHLGMLD+ F P S EC+QKVNR+AD Sbjct: 689 DSEIAMGGYQPYHLSTRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVAD 748 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSS+ LE DLPGHLL YPIG+A++G +TELPG EFFPDT+ARILG KSDY+PPIL Sbjct: 749 KYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYMPPIL 808 Query: 247 TT 242 TT Sbjct: 809 TT 810
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 215 bits (548), Expect = 7e-56 Identities = 99/122 (81%), Positives = 109/122 (89%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMGAYQP+HLA REPARGQIHGFRM+LWYEHLGMLDD PESV+CVQKVN +AD Sbjct: 687 DSEIAMGAYQPHHLATREPARGQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVAD 746 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSS+ LE DLPGHLL YPI VA++G VTELPG EFFPDT+AR+LG KSD+LPPIL Sbjct: 747 KYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGAKSDFLPPIL 806 Query: 247 TT 242 TT Sbjct: 807 TT 808
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 215 bits (548), Expect = 7e-56 Identities = 96/122 (78%), Positives = 111/122 (90%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMG YQP+HL++R+PARGQIHGFRM+LWYEHLGMLD+ F P S+EC++KVNRI+D Sbjct: 689 DSEIAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISD 748 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWD YSS+ LE DLPGHLL YPIGVA++G +TELPG EFFPDT+ARILGTKSDYLPPIL Sbjct: 749 KYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYLPPIL 808 Query: 247 TT 242 TT Sbjct: 809 TT 810
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 213 bits (542), Expect = 3e-55 Identities = 97/122 (79%), Positives = 111/122 (90%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMGAYQP+HL+ R+PARGQIHGFRM+LWYEHLGMLD+ F PES ECV+KVN++A+ Sbjct: 687 DSEIAMGAYQPHHLSTRQPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAE 746 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSS+ LE DLPGHLL YPIGVA++G VTELPG EFFPDT+AR+LG KSDYLPPIL Sbjct: 747 KYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGAKSDYLPPIL 806 Query: 247 TT 242 TT Sbjct: 807 TT 808
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 211 bits (537), Expect = 1e-54 Identities = 95/122 (77%), Positives = 108/122 (88%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMG YQP+HL++R+PARGQIHGFRM+LWYEHLGMLD+ F P SVEC++KVNRI+D Sbjct: 689 DSEIAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISD 748 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWDLYSS+ LE DLPGHLL YP+ V +G VTE PG EFFPDT+ARILGTKSDYLPPIL Sbjct: 749 KYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGTKSDYLPPIL 808 Query: 247 TT 242 TT Sbjct: 809 TT 810
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 207 bits (528), Expect = 1e-53 Identities = 92/122 (75%), Positives = 107/122 (87%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 428 DSEIAMG YQP+HL++R+PARGQ+HGFRM+LWYEHLGMLD+ F P S+EC++KVNRIAD Sbjct: 691 DSEIAMGGYQPHHLSHRQPARGQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIAD 750 Query: 427 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 248 KYWD YSS+ LE DLPGHLL YPI V N+G +TELPG EFFPD++ARILG K DYLPPIL Sbjct: 751 KYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGNKVDYLPPIL 810 Query: 247 TT 242 TT Sbjct: 811 TT 812
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline| phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 180 bits (457), Expect = 2e-45 Identities = 85/123 (69%), Positives = 102/123 (82%), Gaps = 1/123 (0%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANRE-PARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIA 431 DSEIAMGA+QP HL + ARGQIHGFRM+LWYEHLGML D F PES+ECVQ+VN++A Sbjct: 697 DSEIAMGAFQPCHLNTKGLVARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMA 756 Query: 430 DKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPI 251 DKYWDLY+SD+L DLPGHLL+YP+ V +G VTELPG +FFPDT+A ++GTK + LPP Sbjct: 757 DKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGTKGN-LPPF 815 Query: 250 LTT 242 LTT Sbjct: 816 LTT 818
>PLDZ1_ARATH (P58766) Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta)| Length = 820 Score = 145 bits (365), Expect = 1e-34 Identities = 71/126 (56%), Positives = 91/126 (72%), Gaps = 4/126 (3%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRI 434 D+EIAMGAYQP HL + R GQI FR++LW EHL + + FQ PES EC++ VN Sbjct: 695 DTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNAT 754 Query: 433 ADKYWDLYSSDDLEQ--DLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYL 260 AD+ W LYS+ + + DLPGHLLSYPI + ++G VT L G EFFPDT A+++G KS+YL Sbjct: 755 ADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVGEKSNYL 814 Query: 259 PPILTT 242 PPILT+ Sbjct: 815 PPILTS 820
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 117 bits (293), Expect = 3e-26 Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 2/113 (1%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPA--RGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRI 434 D+EIAMGAYQP H R+ + RGQI+G+RM+LW EH+ LDD F +PES+ECV+KV + Sbjct: 846 DTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTM 905 Query: 433 ADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 275 ++ W ++++++ D+ GHLL YP+ V G V LPG E FPD I+GT Sbjct: 906 GERNWKQFAAEEV-SDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGT 957
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 114 bits (286), Expect = 2e-25 Identities = 52/113 (46%), Positives = 81/113 (71%), Gaps = 2/113 (1%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRI 434 D+EIAMG YQP+H ++ +R GQI G+RM+LW EHLG L+ F+ PE++ECV++V ++ Sbjct: 745 DTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQL 804 Query: 433 ADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 275 ++ W Y+++++ ++PGHLL YP+ V G V+ LPG E FPD +I+G+ Sbjct: 805 SELNWRQYAAEEV-TEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGS 856
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 113 bits (283), Expect = 4e-25 Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 2/113 (1%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPA--RGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRI 434 D+EIAMGAYQP H R + RGQI+G+RM+LW EH+ +LDD F PES+ CV+KV + Sbjct: 794 DTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTV 853 Query: 433 ADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 275 A++ W+ + S+++ ++ GHL+ YP+ V G V LPG E FPD ++G+ Sbjct: 854 AEENWEQFRSEEV-SEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGS 905
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD delta)| Length = 868 Score = 113 bits (283), Expect = 4e-25 Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%) Frame = -1 Query: 607 DSEIAMGAYQPYHL---ANREPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNR 437 D+EIAMGAYQP H R P RGQ++G+RM+LW EHLG D F P +EC++KVN Sbjct: 746 DTEIAMGAYQPNHTWAHKGRHP-RGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNT 804 Query: 436 IADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLP 257 I+++ W + D +L GHL+ YP+ V DG V+ LP E FPD +I+G S LP Sbjct: 805 ISEENWKRF-IDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALP 863 Query: 256 PILTT 242 LTT Sbjct: 864 DTLTT 868
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 112 bits (279), Expect = 1e-24 Identities = 51/113 (45%), Positives = 80/113 (70%), Gaps = 2/113 (1%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRI 434 D+EIAMG YQP+H ++ +R GQI G+RM+LW EHLG L+ F+ PE++ECV++V ++ Sbjct: 703 DTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQL 762 Query: 433 ADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 275 ++ W Y+++++ ++ GHLL YP+ V G V+ LPG E FPD +I+G+ Sbjct: 763 SELNWGQYAAEEV-TEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGS 814
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 107 bits (268), Expect = 2e-23 Identities = 50/113 (44%), Positives = 79/113 (69%), Gaps = 2/113 (1%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRI 434 D+EIAMG YQP++ + +R GQI G+RM+LW EHLG L+ F+ PE++ECV++V ++ Sbjct: 737 DTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQL 796 Query: 433 ADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 275 ++ W Y+++++ ++ GHLL YP+ V G V+ LPG E FPD +I+G+ Sbjct: 797 SELNWRQYAAEEV-TEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGS 848
>PLDE1_ARATH (Q9C888) Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD| epsilon) (PLDalpha3) Length = 762 Score = 93.6 bits (231), Expect = 4e-19 Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Frame = -1 Query: 607 DSEIAMGAYQPYHLANREPARGQIHGFRMALWYEHLG---MLDDVFQ-RPESVECVQKVN 440 D+EIA+G YQ +I +R++LWYEH G DD+ PES+ECV+ + Sbjct: 643 DTEIAIGCYQ-----TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLR 697 Query: 439 RIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYL 260 I ++ W++YS D + L HL++YPI V DG V E+ G FPDT+ + G +S Sbjct: 698 TIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPDTKTLVKGKRSKMF 756 Query: 259 PPILTT 242 PP+LTT Sbjct: 757 PPVLTT 762
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 33.1 bits (74), Expect = 0.64 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = -3 Query: 338 RGDGAAWHGVLPRHPGPHPRHQVGLPSPHPHH 243 R G H HP PHP+ L SPHP H Sbjct: 386 RPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQH 417
>SYE_AGRT5 (Q8U7H5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 485 Score = 32.7 bits (73), Expect = 0.84 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +3 Query: 393 SRSSLEYKSQYLSAILFTFWTHSTLSGRWNTSSSI--PRCSYHSAIRKPWIWPRAGSLLA 566 +RS+LEY+ + L A+ +T T W+ + P Y + RKP WP A LL Sbjct: 50 TRSTLEYEQKVLEALRWTGLT-------WSEGPDVGGPYGPYRQSERKPMYWPYAEELLE 102 Query: 567 RWYGW 581 + + + Sbjct: 103 KGHAF 107
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 32.3 bits (72), Expect = 1.1 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -3 Query: 338 RGDGAAWHGVLPRHPGPHPRHQVGLPSPHPHH 243 R G H P+HP PHP+ L PH H Sbjct: 387 RPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQH 418
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 32.0 bits (71), Expect = 1.4 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Frame = +3 Query: 255 GGR*SDLVPRMRARVSGKN-SMPGSSVTTPSLATPMG*LSRWPGRSCSRSSLEYKSQYLS 431 GG S R+R G + S P + +LA P G S PG S S +S S + Sbjct: 598 GGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAPPQGKPSPSPGSSSSSTSPATLSTQPT 657 Query: 432 AILFTFWTHSTL-----SGRWNTSSSIPRCSYHSA 521 + ++ HS L SG ++SSS +C H A Sbjct: 658 RLNSSYSIHSLLGGSSGSGSSSSSSSGKKCGDHPA 692
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = +2 Query: 197 TTKPRPHTGNAGRNLCGEDGGKVVRLGAEDAGPGVG 304 TT PR H G LC E G VR ED GPG+G Sbjct: 49 TTGPRAHIGGGALALCPESSG--VR---EDGGPGLG 79
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 30.0 bits (66), Expect = 5.4 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -3 Query: 299 HPGPHPRHQVGLPSPHPHH 243 HP PHP H P PHPHH Sbjct: 212 HPHPHP-HPHPHPHPHPHH 229
>O51V1_HUMAN (Q9H2C8) Olfactory receptor 51V1 (Odorant receptor HOR3'beta1)| (Olfactory receptor OR11-36) Length = 321 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 13 IQTSXNRVKYPSLILQRSWQHISPPIVTTAFLNHAHHCAY*LSHNY 150 I T+ +K I+ RS+ I+PPI+ F N+ H + LSH++ Sbjct: 144 ILTNSRIIKIGLTIIGRSFFFITPPIICLKFFNYCHF--HILSHSF 187
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 30.0 bits (66), Expect = 5.4 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Frame = -3 Query: 593 HGRIPAIPS-------SQQGAGPGPDPRLPDGAVVRAPRYAG*RVPAPGERRVCPEGE 441 HG +P+ S SQQ P P+ P + P Y G VP P ++ P G+ Sbjct: 464 HGHLPSSASANSVVYASQQQMLPQAHPQAPQAPTMPGPGYGGPPVPPPQQQAENPYGQ 521
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -3 Query: 581 PAIPSSQQGAGPGPDPRLPDGAVVRAPRYAG*RVPAPGERR 459 PA P++ P P P GA AP+ G R PG+ R Sbjct: 148 PAAPAAPSTPAPAPSGPKPGGARPGAPKPGGARPSGPGQDR 188
>HNF3B_MOUSE (P35583) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 459 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = +1 Query: 82 PPIVTTAFLNHAHHCAY*LSHNYNNLLFSETQVLNHQRNHQTEATHRKCRTQSMW*GWGE 261 P + A L HH A+ + NNL+ SE Q + +HQ K Q M G Sbjct: 357 PGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGGY 416 Query: 262 GS 267 GS Sbjct: 417 GS 418
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 29.3 bits (64), Expect = 9.3 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = +3 Query: 204 NRGHTPEMQDAIYVVR-------MGGR*SDLVPRMRARVSGKNSMPGSSVTTPSLATP 356 NRG TP Q+ ++ +R M R L ++ V GK MPG P+L P Sbjct: 166 NRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,892,209 Number of Sequences: 219361 Number of extensions: 2138735 Number of successful extensions: 6796 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6755 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
