Clone Name | rbasd1g18 |
---|---|
Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 549 bits (277), Expect = e-153 Identities = 386/423 (91%), Gaps = 11/423 (2%) Strand = Plus / Minus Query: 1 gattctttcctctccaccgaccaacccacgtntgcatgcacaaaagat--gagtatcttc 58 |||| ||||||||||||||| |||||||||| ||||||||| ||||| || ||||| Sbjct: 1079 gattgtttcctctccaccgatcaacccacgtacgcatgcacacaagataggatcttcttc 1020 Query: 59 acttctgctatgctctanttagactcgagctgcgcgtaccacacaccctggatcttgaca 118 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 acttctgctctgctctagttagactcgagctgcgcgtaccacacaccctggatcttgaca 960 Query: 119 tccttgggcgccttggcgccgaggtcggtgtctgacggctgcacgctctcgaagacgcct 178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 959 tccttgggcgcct------cgaggtcggtgtctgacggctgcacgctctcgaagacgccg 906 Query: 179 atcacctcgccggtctccggcttgctcttggtcacgctgagggtgatgttgcccgtggag 238 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 905 atcacctcgccggtctccggcttgctcttggtgacgctgagcgtgatgttgcccgtggag 846 Query: 239 gaggacgcgttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcg 298 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 845 gaggacgcgttcttcacgttctccttggccaactcctcctcgtctcctctgcctccgcgg 786 Query: 299 ggcancgccaccgcgttgtcgtagccagtagagccaccacggccctttgggtngaggaaa 358 || | ||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 785 ggtagcgcaccggcgttgtcgtagccagtagagccaccacggccctttgggtcgaggaaa 726 Query: 359 gaggaacccctgtagctgggcacgaggaagggcccgctgaagntctccggcttgccggtg 418 || |||||||||||||||||||||||||||||| |||||| |||| |||||||||||| Sbjct: 725 gacgaacccctgtagctgggcacgaggaagggc---ctgaagctctcgggcttgccggtg 669 Query: 419 gcg 421 ||| Sbjct: 668 gcg 666
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1000 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 941 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 940 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 881 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 880 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 821 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 820 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 761 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 760 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 701 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 700 cgaggaagggcccgccgaagctctccggcttgccggtggcg 660
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 17346636 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 17346577 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 17346576 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 17346517 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 17346516 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 17346457 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 17346456 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 17346397 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 17346396 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 17346337 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 17346336 cgaggaagggcccgccgaagctctccggcttgccggtggcg 17346296
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 112897 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 112838 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 112837 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 112778 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 112777 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 112718 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 112717 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 112658 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 112657 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 112598 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 112597 cgaggaagggcccgccgaagctctccggcttgccggtggcg 112557
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1065 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1006 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1005 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 946 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 945 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 886 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 885 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 826 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 825 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 766 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 765 cgaggaagggcccgccgaagctctccggcttgccggtggcg 725
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 892 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 833 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 832 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 773 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 772 cgaggaagggcccgccgaagctctccggcttgccggtggcg 732
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 892 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 833 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 832 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 773 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 772 cgaggaagggcccgccgaagctctccggcttgccggtggcg 732
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 830 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 829 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 770 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 769 cgaggaagggcccgccgaagctctccggcttgccggtggcg 729
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 869 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 810 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 809 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 750 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 749 cgaggaagggcccgccgaagctctccggcttgccggtggcg 709
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 869 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 810 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 809 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 750 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 749 cgaggaagggcccgccgaagctctccggcttgccggtggcg 709
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 830 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 829 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 770 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 769 cgaggaagggcccgccgaagctctccggcttgccggtggcg 729
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1052 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 993 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 992 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 933 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 932 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 873 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 872 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 813 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 812 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 753 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 752 cgaggaagggcccgccgaagctctccggcttgccggtggcg 712
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1074 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1015 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1014 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 955 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 954 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 895 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 894 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 835 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 834 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 775 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 774 cgaggaagggcccgccgaagctctccggcttgccggtggcg 734
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 438 bits (221), Expect = e-120 Identities = 310/341 (90%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || || ||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccacagcgttgtcgt 830 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| ||||||||||| ||||||||||||| |||||| || ||||| | ||||||||||| Sbjct: 829 agccggtagagccaccgcggccctttgggtcgaggaaggacgaaccacggtagctgggca 770 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||||||||||||||||||| Sbjct: 769 cgaggaagggcccgccgaagctctccggcttgccggtggcg 729
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 291 bits (147), Expect = 9e-76 Identities = 289/341 (84%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 140 |||||||||| |||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 1322 actcgagctgagcgtaccagannnnntggatcttgacatccttgggcgccttggccccga 1263 Query: 141 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 200 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 1262 ggtcggtgtcggacggctgcacgctctcgaagacgccgatgacctcgccggtctccgggt 1203 Query: 201 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 260 |||||||||| ||||| | ||||||||||| |||||||||| |||||||| | ||||| Sbjct: 1202 tgctcttggtgacgctcaacgtgatgttgccggtggaggaggcggcgttcttgatgttct 1143 Query: 261 ccttggccagntcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgt 320 |||| || ||||||||||| |||||| |||| ||| || |||||||||| Sbjct: 1142 ccttctggagctcctcctcgtcacctctgnnnnnggcgtcgtgcgcgacggcgttgtcgt 1083 Query: 321 agccagtagagccaccacggccctttgggtngaggaaagaggaacccctgtagctgggca 380 |||| || ||||| || |||||||| |||| |||||| ||||| || | ||||||||||| Sbjct: 1082 agccggtggagccgccgcggcccttggggtcgaggaaggaggagccacggtagctgggca 1023 Query: 381 cgaggaagggcccgctgaagntctccggcttgccggtggcg 421 ||||||||||||||| |||| |||| ||||||||||||||| Sbjct: 1022 cgaggaagggcccgccgaagctctcgggcttgccggtggcg 982
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 917 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 858 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 857 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 814 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 576 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 517 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 516 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 473 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 728 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 669 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 668 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 610
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 831 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 772 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 771 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 876 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 817 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 816 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 773 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1028 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 969 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 968 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 910
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 831 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 772 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 771 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 865 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 806 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 805 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 762 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 871 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 812 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 811 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 768 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1023 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 964 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 963 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 905
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 865 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 806 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 805 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 762 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 865 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 806 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 805 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 762 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 1247 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 1188 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 1187 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 1144 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1399 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1340 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1339 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 1281
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 856 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 797 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 796 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 753 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1008 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 949 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 948 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 890
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 847 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 788 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 787 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 744 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || |||| ||| || || ||| Sbjct: 999 taccacaccccttggatcttcacatcctttggtaccttagcaccgaagtcagtatccgac 940 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 939 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 881
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 917 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 858 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 857 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 814 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 58872 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 58813 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 58812 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 58769 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 59024 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 58965 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 58964 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 58906
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 1248 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 1189 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 1188 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 1145 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| ||||| ||| Sbjct: 1400 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtgtccgac 1341 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1340 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctcttagtcac 1282
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 99.6 bits (50), Expect = 7e-18 Identities = 90/104 (86%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 864 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 805 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 804 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 761 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1016 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 957 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 956 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 97.6 bits (49), Expect = 3e-17 Identities = 214/270 (79%) Strand = Plus / Minus Query: 103 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 162 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 932 Query: 163 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 222 |||||| || || || || ||||| |||||||| ||||||| || ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgcactgggtaacactcagggt 872 Query: 223 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagntcctcctcgtc 282 ||| || || || || || | | ||||| ||||||||||| | || ||||||||||| Sbjct: 871 gatctttcctgtagaagatgcagtattctttacgttctccttctcaagctcctcctcgtc 812 Query: 283 tcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagagccaccacggcc 342 |||||| ||||| || |||| || || |||||||| ||||||||||| ||||| || || Sbjct: 811 tcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccaccccgtcc 752 Query: 343 ctttgggtngaggaaagaggaacccctgta 372 |||||||| ||||| || ||||| ||||| Sbjct: 751 ctttgggtcaaggaaggatgaacctctgta 722
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 97.6 bits (49), Expect = 3e-17 Identities = 89/103 (86%) Strand = Plus / Minus Query: 248 ttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgcc 307 ||||||||||||||||| | || ||||||||||||||||||||||| || |||| ||| Sbjct: 862 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctccagctggcaatgcc 803 Query: 308 accgcgttgtcgtagccagtagagccaccacggccctttgggt 350 || |||||||| || || || || ||||||||||||||||||| Sbjct: 802 acggcgttgtcatatcctgtggatccaccacggccctttgggt 760 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 164 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 97.6 bits (49), Expect = 3e-17 Identities = 214/270 (79%) Strand = Plus / Minus Query: 103 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 162 |||||| || || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctgaattttcacatccttgggaacctttgcaccgagatcagtatcagatggctggat 932 Query: 163 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 222 |||||| || || || || ||||| |||||||| |||||||||| ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgctctgggtaacactcagggt 872 Query: 223 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagntcctcctcgtc 282 ||| || || || || || || | ||||| ||||||||||| || ||||||||||| Sbjct: 871 gatctttcctgtagaagatgaagtattctttacgttctccttctgaagctcctcctcgtc 812 Query: 283 tcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagagccaccacggcc 342 |||||| ||||| || |||| || || |||||||| ||||||||||| ||||| || || Sbjct: 811 tcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccaccccgtcc 752 Query: 343 ctttgggtngaggaaagaggaacccctgta 372 |||||||| ||||| || ||||| ||||| Sbjct: 751 ctttgggtcaaggaaggatgaacctctgta 722
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 95.6 bits (48), Expect = 1e-16 Identities = 172/214 (80%) Strand = Plus / Minus Query: 104 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 163 |||||||||||||||||||| || |||| || || | || ||||| || || |||| | Sbjct: 980 ccctggatcttgacatccttagggacctttgctcccaaatcagtgtcagatggttgcagg 921 Query: 164 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggtg 223 |||||||| || || || ||||| |||||||| |||||||||||||| || | |||||| Sbjct: 920 ctctcgaacactccaataacctctccggtctcaggcttgctcttggtgacacccagggtg 861 Query: 224 atgttgcccgtggaggaggacgcgttcttcacgttctccttggccagntcctcctcgtct 283 || || || || || || || | |||||| | ||||||||||| || |||||||| ||| Sbjct: 860 attttcccagttgacgatgatgtgttcttgatgttctccttggtgagctcctcctcatct 801 Query: 284 cctctgcctccggcgggcancgccaccgcgttgt 317 ||||||||||| || |||| |||||||| |||| Sbjct: 800 cctctgcctcccgcaggcagtgccaccgcattgt 767
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/104 (85%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||| ||||| | || ||||||||||||||||||||||| || |||| || Sbjct: 867 gttcttcacgttttcctttacaagctcctcctcgtctcctctgcctccagctggcaatgc 808 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| |||||||| || || || || ||||||||||||||||||| Sbjct: 807 cacggcgttgtcatatcctgtggatccaccacggccctttgggt 764 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1019 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 960 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 959 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 901
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 89.7 bits (45), Expect = 7e-15 Identities = 213/270 (78%) Strand = Plus / Minus Query: 103 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 162 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 985 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 926 Query: 163 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 222 |||||| || || || || ||||| ||||||| |||||||||| ||| || || ||||| Sbjct: 925 gctctcaaatactccaatgacctcaccggtctgtggcttgctctgggtaacactcagggt 866 Query: 223 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagntcctcctcgtc 282 ||| || || || || || | | ||||| ||||||||||| | || |||||||| || Sbjct: 865 gatctttcctgtagaagatgcagtattctttacgttctccttctcaagctcctcctcatc 806 Query: 283 tcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagagccaccacggcc 342 |||||| ||||| || |||| || || |||||||| ||||||||||| ||||| || || Sbjct: 805 tcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccacctcgtcc 746 Query: 343 ctttgggtngaggaaagaggaacccctgta 372 |||||||| ||||| || ||||| ||||| Sbjct: 745 ctttgggtcaaggaaggatgaacctctgta 716
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 943 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 884 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 883 cactgcattatcgtacccagtggatccaccacgaccctttgggt 840
>gb|BT015545.1| Arabidopsis thaliana At3g50820 mRNA sequence Length = 738 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 570 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 511 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 510 cactgcattatcgtacccagtggatccaccacgaccctttgggt 467
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Plus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 39813 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 39872 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 39873 cactgcattatcgtacccagtggatccaccacgaccctttgggt 39916
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 828 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 769 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 768 cactgcattatcgtacccagtggatccaccacgaccctttgggt 725
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 886 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 827 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 826 cactgcattatcgtacccagtggatccaccacgaccctttgggt 783
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 834 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 775 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 774 cactgcattatcgtacccagtggatccaccacgaccctttgggt 731
>emb|BX823297.1|CNS0A6KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 395 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 336 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 335 cactgcattatcgtacccagtggatccaccacgaccctttgggt 292
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 943 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 884 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 883 cactgcattatcgtacccagtggatccaccacgaccctttgggt 840
>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence Length = 328 Score = 83.8 bits (42), Expect = 4e-13 Identities = 53/57 (92%) Strand = Plus / Minus Query: 85 gagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccgag 141 |||||||||||||||||| || ||||||||||||||||||||| |||| |||||||| Sbjct: 86 gagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttngcgccgag 30
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 83.8 bits (42), Expect = 4e-13 Identities = 88/104 (84%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||| ||||| ||||||| || || ||||||||||||||||||||||| |||| || Sbjct: 864 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggcaaagc 805 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 ||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 804 cactgcattatcgtacccagtggatccaccacgaccctttgggt 761
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 81.8 bits (41), Expect = 2e-12 Identities = 212/270 (78%) Strand = Plus / Minus Query: 103 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 162 ||||||||| |||||||||||||| |||| || || || || || || || ||||| | Sbjct: 990 accctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggat 931 Query: 163 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 222 |||||| || || || || ||||| || ||||| |||||||||| ||| || || | ||| Sbjct: 930 gctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggt 871 Query: 223 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagntcctcctcgtc 282 ||| || || || | || | | |||||| ||||||||||| || ||||||||||| Sbjct: 870 gatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtc 811 Query: 283 tcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagagccaccacggcc 342 |||||| ||||| || |||| || || |||||||| ||||||||||| ||||| || || Sbjct: 810 tcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccacctcgtcc 751 Query: 343 ctttgggtngaggaaagaggaacccctgta 372 |||||||| ||||| || ||||| ||||| Sbjct: 750 ctttgggtcaaggaaggatgaacctctgta 721
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/146 (81%) Strand = Plus / Minus Query: 272 tcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagag 331 |||||||| || ||||| ||||| ||||| | ||||| || |||||||| || | ||| Sbjct: 833 tcctcctcatcacctctacctccagcggggagtgccacggcattgtcgtaaccggcagat 774 Query: 332 ccaccacggccctttgggtngaggaaagaggaacccctgtagctgggcacgaggaagggc 391 || || | ||||||||||| ||||| || ||||||| |||||| ||||||||| | | | Sbjct: 773 cctcccctgccctttgggtcaaggaacgacgaaccccggtagctcggcacgaggtacgac 714 Query: 392 ccgctgaagntctccggcttgccggt 417 ||||||||| |||||||||| ||||| Sbjct: 713 ccgctgaagctctccggcttcccggt 688
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 75.8 bits (38), Expect = 1e-10 Identities = 87/104 (83%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||| ||||||||||||||||| || |||| || Sbjct: 895 gttcttcacgttctccttcgaaagctcctcttcgtctcctctgcctccagctggcaatgc 836 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 || |||||||| || || || || |||||||| |||||||||| Sbjct: 835 aacggcgttgtcatatcctgtggatccaccacgaccctttgggt 792 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || ||||||| || | ||| || || ||| Sbjct: 1047 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatcagac 988 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 ||||| | |||| ||| || || ||||| || || |||||||| |||||||||||||| Sbjct: 987 ggctgaagactctggaacactccgatcacttctcctgtctccggtttgctcttggtcac 929
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 73.8 bits (37), Expect = 4e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 80 gactcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccg 139 ||||||||||| || ||||| || ||||||||||| |||||||| || || || || || Sbjct: 66564 gactcgagctgagcataccaaactccctggatcttcacatcctttggagctttcgctccc 66623 Query: 140 aggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggc 199 | || ||||| |||||||| | ||||||||| || || |||||||| ||||| || ||| Sbjct: 66624 aaatcagtgtcggacggctgaatgctctcgaacacaccaatcacctcaccggtatcaggc 66683 Query: 200 ttgctcttggtcacgct 216 ||||||| |||||||| Sbjct: 66684 ttgctctgtgtcacgct 66700 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 80 gactcgagctgcgcgtaccacacaccctggatcttgacatcctt 123 ||||| ||||| || ||||| || ||||||||||| |||||||| Sbjct: 55661 gactcaagctgagcataccaaactccctggatcttcacatcctt 55704
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 69.9 bits (35), Expect = 6e-09 Identities = 88/105 (83%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggc-gggcancg 305 |||||| ||||| ||||||| || || ||||||||||||||||||||||| || || | Sbjct: 850 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggtcaaag 791 Query: 306 ccaccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 |||| || || ||||| ||||| || |||||||| |||||||||| Sbjct: 790 ccactgcattatcgtacccagtggatccaccacgaccctttgggt 746
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 67.9 bits (34), Expect = 2e-08 Identities = 86/104 (82%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcctccggcgggcancgc 306 |||||||||||||||||| | || ||||| ||||||||||||||||| || |||| || Sbjct: 886 gttcttcacgttctccttcgaaagctcctcttcgtctcctctgcctccagctggcaatgc 827 Query: 307 caccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 || |||||||| || || | || |||||||| |||||||||| Sbjct: 826 aacggcgttgtcatatcctgaggatccaccacgaccctttgggt 783 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 95 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 154 |||||||| || |||||||| |||||||| || ||||||| || | ||| || || ||| Sbjct: 1038 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatccgac 979 Query: 155 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 213 || || | |||||||| || || ||||| || || |||||||| |||||||||||||| Sbjct: 978 gggtgaagactctcgaacactccgatcacttctcctgtctccggtttgctcttggtcac 920
>emb|X05548.1|SOPS33 Spinach mRNA for 33kDA precursor protein (associated with photosynthetic water oxidation complex) Length = 1153 Score = 67.9 bits (34), Expect = 2e-08 Identities = 77/92 (83%) Strand = Plus / Minus Query: 272 tcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagag 331 ||||||||||||||||| || ||||| |||| ||| || |||||||| || || || || Sbjct: 849 tcctcctcgtctcctctcccaccggcaggcaacgcaacagcgttgtcatacccggtggac 790 Query: 332 ccaccacggccctttgggtngaggaaagagga 363 ||||| ||||||||||||| ||||| ||||| Sbjct: 789 ccacctcggccctttgggtcaaggaacgagga 758
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 295 ggcgggcancgccaccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 |||||||| ||||| |||||||||||||| || |||||||| |||||||| |||| Sbjct: 687 ggcgggcagagccacggcgttgtcgtagccggtcgagccaccgcggcccttggggt 632 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 119 tccttgggcgccttggcgccgaggtcggtgtctgacggctg 159 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 857 tccttgggggccttggcgcccaggtcagtgtccgagggctg 817
>emb|X13826.1|CROEE1 C.reinhardtii psb1 mRNA for OEE1 protein of photosystem II (oxygen-evolving enhancer protein) Length = 1714 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 295 ggcgggcancgccaccgcgttgtcgtagccagtagagccaccacggccctttgggt 350 |||||||| ||||| |||||||||||||| || |||||||| |||||||| |||| Sbjct: 819 ggcgggcagagccacggcgttgtcgtagccggtcgagccaccgcggcccttggggt 764
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 54.0 bits (27), Expect = 4e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 247 gttcttcacgttctccttggccagntcctcctcgtctcctctgcct 292 |||||||||||||||||| | || ||||| ||||||||||||||| Sbjct: 836 gttcttcacgttctcctttgagagctcctcttcgtctcctctgcct 791
>gb|BT014033.1| Lycopersicon esculentum clone 133096F, mRNA sequence Length = 1170 Score = 48.1 bits (24), Expect = 0.023 Identities = 65/79 (82%) Strand = Plus / Minus Query: 272 tcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagag 331 |||||||| |||||||||||||| || |||| || || || |||||||| ||||| || Sbjct: 839 tcctcctcatctcctctgcctccagctggcaatgcaacagcattgtcgtaaccagtggat 780 Query: 332 ccaccacggccctttgggt 350 ||||| | ||| ||||||| Sbjct: 779 ccacccctgccttttgggt 761
>gb|AF110780.1|AF110780 Volvox carteri f. nagariensis clone G14 oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1427 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 311 gcgttgtcgtagccagtagagccaccacggccctttgggt 350 |||||||||||||| || |||||||| |||||||| |||| Sbjct: 709 gcgttgtcgtagccggtcgagccaccgcggcccttggggt 670
>emb|X17578.1|STPPOEC S.tuberosum mRNA for a 33kDa precursor protein of the oxygen-evolving complex Length = 1116 Score = 48.1 bits (24), Expect = 0.023 Identities = 65/79 (82%) Strand = Plus / Minus Query: 272 tcctcctcgtctcctctgcctccggcgggcancgccaccgcgttgtcgtagccagtagag 331 |||||||| |||||||||||||| || |||| || || || ||||| || ||||| || Sbjct: 803 tcctcctcatctcctctgcctccagctggcaatgcaacagcattgtcataaccagtggat 744 Query: 332 ccaccacggccctttgggt 350 ||||| | ||||||||||| Sbjct: 743 ccacccctgccctttgggt 725
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 46.1 bits (23), Expect = 0.092 Identities = 44/51 (86%) Strand = Plus / Minus Query: 109 gatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctg 159 |||||||||||||||||| ||||||| || ||||| ||||| || ||||| Sbjct: 489 gatcttgacatccttgggggccttggaccccaggtctgtgtcagagggctg 439
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 gaggaacccctgtagctgggca 380 |||||||||||||||||||||| Sbjct: 169515 gaggaacccctgtagctgggca 169536
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 actcgagctgcgcgtaccacac 102 |||||||||||||||||||||| Sbjct: 28 actcgagctgcgcgtaccacac 7
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 gaggaacccctgtagctgggca 380 |||||||||||||||||||||| Sbjct: 41451 gaggaacccctgtagctgggca 41472
>gb|AY071483.1| Drosophila melanogaster RE55321 full insert cDNA Length = 952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>ref|NM_143543.2| Drosophila melanogaster Jonah 99Fi CG18030-RA (Jon99Fi), mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>ref|NM_143542.1| Drosophila melanogaster Jonah 99Fii CG2229-RA (Jon99Fii), mRNA Length = 914 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AY070585.1| Drosophila melanogaster RE68767 full length cDNA Length = 937 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 132 accctggatcttgacatcctt 112
>gb|AY069737.1| Drosophila melanogaster LP05501 full length cDNA Length = 4651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 3832 accctggatcttgacatcctt 3812
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 59864 accctggatcttgacatcctt 59844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 58565 accctggatcttgacatcctt 58585
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 57447 accctggatcttgacatcctt 57427 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 accctggatcttgacatcctt 123 ||||||||||||||||||||| Sbjct: 56148 accctggatcttgacatcctt 56168
>ref|XM_483762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 509 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 207 acgttctccttggcccgctcctcctcg 181
>ref|XM_507334.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.11 mRNA Length = 561 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 253 acgttctccttggcccgctcctcctcg 227
>ref|XM_473222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tcctcctcgtctcctctgcctccg 295 |||||||||||||||| ||||||| Sbjct: 32 tcctcctcgtctcctccgcctccg 55
>ref|XM_959978.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acgctgagggtgatgttgcc 231 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|XM_331675.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acgctgagggtgatgttgcc 231 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|XM_802280.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511685.40) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tgttgcccgtggaggaggac 244 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>ref|XM_815950.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508741.90) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tgttgcccgtggaggaggac 244 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>ref|XM_505779.1| Yarrowia lipolytica CLIB122, YALI0F23221g predicted mRNA Length = 1518 Score = 40.1 bits (20), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 257 ttctccttggccagntcctcctc 279 |||||||||||||| |||||||| Sbjct: 1508 ttctccttggccagctcctcctc 1486
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 acgctgagggtgatgttgcc 231 |||||||||||||||||||| Sbjct: 90457 acgctgagggtgatgttgcc 90438
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccgtggaggaggacgcgttc 250 |||||||||||||||||||| Sbjct: 76750 ccgtggaggaggacgcgttc 76769
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 tgagggtgatgttgcccgtggagg 239 |||||||||||| ||||||||||| Sbjct: 3055754 tgagggtgatgtcgcccgtggagg 3055731
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ctggatcttgacatccttgg 125 |||||||||||||||||||| Sbjct: 19307 ctggatcttgacatccttgg 19288
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ctggatcttgacatccttgg 125 |||||||||||||||||||| Sbjct: 36770 ctggatcttgacatccttgg 36751
>gb|AY860592.1| Physcia aipolia isolate 8Aa 26S ribosomal RNA gene, partial sequence Length = 1314 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gtgatgttgcccgtggagga 240 |||||||||||||||||||| Sbjct: 546 gtgatgttgcccgtggagga 527
>gb|AY860591.1| Physcia aipolia isolate 2Ab 26S ribosomal RNA gene, partial sequence Length = 1437 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gtgatgttgcccgtggagga 240 |||||||||||||||||||| Sbjct: 586 gtgatgttgcccgtggagga 567
>gb|AY860590.1| Physcia aipolia isolate 6Ah 26S ribosomal RNA gene, partial sequence Length = 1321 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gtgatgttgcccgtggagga 240 |||||||||||||||||||| Sbjct: 554 gtgatgttgcccgtggagga 535
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tcctcctcgtctcctctgcctccg 295 |||||||||||||||| ||||||| Sbjct: 26088276 tcctcctcgtctcctccgcctccg 26088299
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 27959206 acgttctccttggcccgctcctcctcg 27959180
>gb|AY773914.1| Physcia aipolia 26S large subunit ribosomal RNA gene, partial sequence Length = 1436 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gtgatgttgcccgtggagga 240 |||||||||||||||||||| Sbjct: 585 gtgatgttgcccgtggagga 566
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 36698 acgttctccttggcccgctcctcctcg 36672
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgccttggcgccgaggtcgg 146 |||||||||||||||||||| Sbjct: 3379461 cgccttggcgccgaggtcgg 3379480
>dbj|AK103369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P16, full insert sequence Length = 816 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tcctcctcgtctcctctgcctccg 295 |||||||||||||||| ||||||| Sbjct: 65 tcctcctcgtctcctccgcctccg 88
>dbj|AK102934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114I03, full insert sequence Length = 1488 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tcctcctcgtctcctctgcctccg 295 |||||||||||||||| ||||||| Sbjct: 90 tcctcctcgtctcctccgcctccg 113
>dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116D07, full insert sequence Length = 509 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 207 acgttctccttggcccgctcctcctcg 181
>dbj|AK061536.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F08, full insert sequence Length = 1464 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tcctcctcgtctcctctgcctccg 295 |||||||||||||||| ||||||| Sbjct: 66 tcctcctcgtctcctccgcctccg 89
>dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C04, full insert sequence Length = 561 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 253 acgttctccttggcccgctcctcctcg 227
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cgccaccgcgttgtcgtagc 323 |||||||||||||||||||| Sbjct: 1389912 cgccaccgcgttgtcgtagc 1389893
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tcctcctcgtctcctctgcctccg 295 |||||||||||||||| ||||||| Sbjct: 122603 tcctcctcgtctcctccgcctccg 122626
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acgctgagggtgatgttgcc 231 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 257 ttctccttggccagntcctcctc 279 |||||||||||||| |||||||| Sbjct: 3045240 ttctccttggccagctcctcctc 3045262
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acgctgagggtgatgttgcc 231 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 acgctgagggtgatgttgcc 231 |||||||||||||||||||| Sbjct: 2463 acgctgagggtgatgttgcc 2482
>dbj|AB029059.1| Oryza sativa (japonica cultivar-group) OsIF1-1 mRNA for F1F0-ATPase inhibitor protein, complete cds Length = 498 Score = 40.1 bits (20), Expect = 5.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 254 acgttctccttggccagntcctcctcg 280 ||||||||||||||| | ||||||||| Sbjct: 165 acgttctccttggcccgctcctcctcg 139 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,983,841 Number of Sequences: 3902068 Number of extensions: 2983841 Number of successful extensions: 50017 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49585 Number of HSP's gapped (non-prelim): 424 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)