ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC077995.1| Xenopus laevis MGC82349 protein, mRNA (cDNA clone... 86 8e-14
2gb|BC082381.1| Xenopus laevis MGC81743 protein, mRNA (cDNA clone... 80 5e-12
3emb|AJ131094.1|XLA131094 Xenopus laevis Xvent-1B gene, exons 1-3 76 8e-11
4gb|AF133122.1|AF133122 Xenopus laevis transcription factor poste... 76 8e-11
5gb|BC060480.1| Xenopus laevis hypothetical protein MGC68729, mRN... 74 3e-10
6gb|BC043736.1| Xenopus laevis ring finger protein 11, mRNA (cDNA... 68 2e-08
7gb|BC108492.1| Xenopus laevis ring finger protein 11, mRNA (cDNA... 68 2e-08
8gb|BC089272.1| Xenopus laevis cDNA clone MGC:85003 IMAGE:6325747... 66 8e-08
9gb|BC076763.1| Xenopus laevis cysteine-rich hydrophobic domain 2... 64 3e-07
10gb|AF020551.1|AF020551 Xenopus laevis ribosomal protein S6 (rpS6... 64 3e-07
11gb|BC060454.1| Xenopus laevis hypothetical protein MGC68521, mRN... 62 1e-06
12gb|BC108566.1| Xenopus laevis cDNA clone MGC:131047 IMAGE:798090... 60 5e-06
13gb|BC076787.1| Xenopus laevis cell division cycle associated 4, ... 60 5e-06
14gb|BC079982.1| Xenopus laevis MGC81211 protein, mRNA (cDNA clone... 60 5e-06
15gb|BC041715.1| Xenopus laevis CDC37 cell division cycle 37 homol... 60 5e-06
16gb|BC045032.1| Xenopus laevis x-ray repair cross-complementing g... 60 5e-06
17gb|AY429516.1| Xenopus laevis retinal ABCA4 transporter (ABCA4) ... 60 5e-06
18gb|DQ096851.1| Xenopus laevis endod mRNA, complete sequence 58 2e-05
19gb|BC077334.1| Xenopus laevis MGC80327 protein, mRNA (cDNA clone... 56 7e-05
20gb|BC043788.1| Xenopus laevis osteoglycin, mRNA (cDNA clone MGC:... 56 7e-05
21gb|BC042346.1| Xenopus laevis CDC23 (cell division cycle 23, yea... 56 7e-05
22gb|BC082659.1| Xenopus laevis hypothetical LOC494676, mRNA (cDNA... 56 7e-05
23gb|AF410801.1|AF410801 Xenopus laevis nodal related 2 (Xnr2) gen... 54 3e-04
24gb|BC089173.1| Xenopus laevis cDNA clone MGC:98934 IMAGE:4174341... 52 0.001
25gb|BC077999.1| Xenopus laevis MGC82412 protein, mRNA (cDNA clone... 50 0.005
26gb|BC082369.1| Xenopus laevis MGC81611 protein, mRNA (cDNA clone... 50 0.005
27gb|BC074483.1| Xenopus laevis MGC84788 protein, mRNA (cDNA clone... 50 0.005
28gb|BC070740.1| Xenopus laevis hypothetical protein MGC83734, mRN... 50 0.005
29gb|AF387815.1|AF387815 Xenopus laevis LIM protein prickle (PRICK... 50 0.005
30gb|BC097901.1| Xenopus laevis cDNA clone IMAGE:6325995 50 0.005
31gb|BC056026.1| Xenopus laevis mitogen-activated protein kinase k... 48 0.018
32gb|AF410903.1|AF410903S1 Xenopus laevis nodal related protein Xn... 48 0.018
33emb|AJ314758.1|XLA314758 Xenopus laevis IL-1b gene for interleuk... 48 0.018
34dbj|AB175888.1| Xenopus laevis FSH beta mRNA for follicle-stimul... 48 0.018
35gb|BC084860.1| Xenopus laevis hypothetical LOC495390, mRNA (cDNA... 48 0.018
36gb|BC081256.1| Xenopus laevis cDNA clone IMAGE:3403752 46 0.072
37gb|BC070815.1| Xenopus laevis hypothetical protein MGC83892, mRN... 46 0.072
38gb|BC046719.1| Xenopus laevis profilin II, mRNA (cDNA clone MGC:... 46 0.072
39emb|X59369.1|XLPOMCB X.laevis POMC-B gene for proopiomelanocortin-B 46 0.072
40gb|BC089134.1| Xenopus laevis cDNA clone MGC:85123 IMAGE:6868547... 46 0.072
41gb|BC081220.1| Xenopus laevis MGC85250 protein, mRNA (cDNA clone... 44 0.28
42gb|BC080102.1| Xenopus laevis MGC84380 protein, mRNA (cDNA clone... 44 0.28
43gb|BC074481.1| Xenopus laevis MGC84786 protein, mRNA (cDNA clone... 44 0.28
44gb|BC072346.1| Xenopus laevis hypothetical protein MGC83482, mRN... 44 0.28
45gb|BC072294.1| Xenopus laevis hypothetical protein MGC82474, mRN... 44 0.28
46gb|BC068666.1| Xenopus laevis hypothetical protein MGC81054, mRN... 44 0.28
47gb|BC070999.1| Xenopus laevis cDNA clone MGC:80022 IMAGE:3401636... 44 0.28
48gb|BC084087.1| Xenopus laevis hypothetical LOC495001, mRNA (cDNA... 44 0.28
49gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, com... 42 1.1
50gb|BC087328.1| Xenopus laevis similar to integrin, beta-like 1 (... 42 1.1
51gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosom... 42 1.1
52gb|BC082378.1| Xenopus laevis MGC81710 protein, mRNA (cDNA clone... 42 1.1
53gb|BC081150.1| Xenopus laevis MGC84207 protein, mRNA (cDNA clone... 42 1.1
54gb|AC100986.9| Mus musculus chromosome 3, clone RP23-77E5, compl... 42 1.1
55gb|BC070847.1| Xenopus laevis hypothetical protein LOC432046, mR... 42 1.1
56gb|AC165348.3| Mus musculus BAC clone RP23-300C11 from chromosom... 42 1.1
57gb|BC046744.1| Xenopus laevis similar to integrin, beta-like 1 (... 42 1.1
58gb|DQ096850.1| Xenopus laevis tram1 mRNA, complete sequence 42 1.1
59gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, compl... 42 1.1
60gb|BC110703.1| Xenopus laevis cDNA clone MGC:130645 IMAGE:797824... 42 1.1
61gb|BC110935.1| Xenopus laevis cDNA clone IMAGE:6859066, partial cds 42 1.1
62gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 42 1.1
63gb|DQ241814.1| Xenopus laevis titin novex-3 (TN3) mRNA, partial cds 40 4.4
64gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome... 40 4.4
65gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosom... 40 4.4
66gb|BC082661.1| Xenopus laevis cDNA clone IMAGE:4965447 40 4.4
67gb|BC074319.1| Xenopus laevis MGC84142 protein, mRNA (cDNA clone... 40 4.4
68gb|BC073405.1| Xenopus laevis MGC80868 protein, mRNA (cDNA clone... 40 4.4
69gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome... 40 4.4
70gb|BC060755.1| Xenopus laevis hypothetical protein MGC69083, mRN... 40 4.4
71gb|BC061947.1| Xenopus laevis Kit receptor tyrosine kinase homol... 40 4.4
72gb|AC154548.3| Mus musculus BAC clone RP23-437N23 from chromosom... 40 4.4
73gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence 40 4.4
74gb|AC016395.5| Homo sapiens chromosome 10 clone RP11-153K11, com... 40 4.4
75gb|AC110011.3| Homo sapiens chromosome 5 clone RP11-536N17, comp... 40 4.4
76gb|AC128031.4| Rattus norvegicus BAC CH230-418E23 (Children's H... 40 4.4
77gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome... 40 4.4
78gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5... 40 4.4
79gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O2... 40 4.4
80gb|BC094193.1| Xenopus laevis cDNA clone IMAGE:6950416 40 4.4
81emb|AJ428933.1|XLA428933 Xenopus laevis partial beta-TrCP gene, ... 40 4.4
82emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chr... 40 4.4
83gb|BC043885.1| Xenopus laevis titin novex-3, mRNA (cDNA clone IM... 40 4.4
84gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, comple... 40 4.4
85emb|AL627252.16| Mouse DNA sequence from clone RP23-272P17 on ch... 40 4.4 
>gb|BC077995.1| Xenopus laevis MGC82349 protein, mRNA (cDNA clone MGC:82349
            IMAGE:4201739), complete cds
          Length = 2429

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 79   aggatagcaacctctcccattgacttatatacaaccttggaaggtctgngatggatgatt 138
            |||||||  |||||||||| ||||||||||| |||||  | ||||||| |||||  ||||
Sbjct: 2220 aggatagggacctctcccaatgacttatatataacctcagtaggtctgagatggtggatt 2161

                                                      
Query: 139  ttcggattctgacttgttgccgccttggggtataataaatct 180
            ||| ||||||||||| ||||  ||| ||||||||||||||||
Sbjct: 2160 ttcagattctgactttttgcatcctcggggtataataaatct 2119
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>gb|BC082381.1| Xenopus laevis MGC81743 protein, mRNA (cDNA clone MGC:81743
            IMAGE:6865643), complete cds
          Length = 2629

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                        
Query: 68   aacttccaattaggatagcaacctctcccattgacttatatacaaccttggaaggtctgn 127
            ||||||||| ||| ||||  |||||||| ||||||||||||||| ||| || ||||||| 
Sbjct: 1591 aacttccaaatagtatagggacctctcctattgacttatatacatcctcggcaggtctga 1650

                                           
Query: 128  gatggatgattttcggattctgacttgttgc 158
            ||||   ||||||||||||||||||| ||||
Sbjct: 1651 gatgccagattttcggattctgactttttgc 1681



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 237  cattcggactttaataaataaccccct 263
            |||||||||||||||||||||||||||
Sbjct: 1772 cattcggactttaataaataaccccct 1798
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>emb|AJ131094.1|XLA131094 Xenopus laevis Xvent-1B gene, exons 1-3
          Length = 6455

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 91  tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
           |||| ||||||||||||| |||||| || ||||||| ||||   ||||||||||||||||
Sbjct: 889 tctctcattgacttatatgcaacctcggcaggtctgagatgagggattttcggattctga 948

                                        
Query: 151 cttgttgccgccttggggtataataaatc 179
           ||| || |   ||||||||||||||||||
Sbjct: 949 ctttttccattcttggggtataataaatc 977
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>gb|AF133122.1|AF133122 Xenopus laevis transcription factor posterior-ventral 1A protein
           (PV.1A) gene, partial cds
          Length = 3808

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 91  tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
           |||| ||||||||||||| |||||| || ||||||| ||||   ||||||||||||||||
Sbjct: 889 tctctcattgacttatatgcaacctcggcaggtctgagatgagggattttcggattctga 948

                                        
Query: 151 cttgttgccgccttggggtataataaatc 179
           ||| || |   ||||||||||||||||||
Sbjct: 949 ctttttccattcttggggtataataaatc 977
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>gb|BC060480.1| Xenopus laevis hypothetical protein MGC68729, mRNA (cDNA clone
            MGC:68729 IMAGE:4057778), complete cds
          Length = 3376

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                        
Query: 32   tcggnttttcaggctaaacccagngcagaccatgataacttccaattaggatagcaacct 91
            |||| ||||||||||||  | || ||||||||    ||||||||| || |||||  ||||
Sbjct: 3045 tcggattttcaggctaatactagcgcagaccacagaaacttccaaataagatagggacct 3104

                                                                        
Query: 92   ctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctgac 151
            |||||||||||||||||||||| | || | ||||| ||||   | |||||||||||||||
Sbjct: 3105 ctcccattgacttatatacaacttcggcatgtctgagatgctggcttttcggattctgac 3164

              
Query: 152  tt 153
            ||
Sbjct: 3165 tt 3166



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 228  agtttttagcattcggactttaataaataacccccttaaagt 269
            ||||||| |||||| |||||||||||||||| |||| |||||
Sbjct: 3238 agtttttggcattcagactttaataaataactccctaaaagt 3279
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>gb|BC043736.1| Xenopus laevis ring finger protein 11, mRNA (cDNA clone MGC:52858
            IMAGE:4887870), complete cds
          Length = 2365

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||||||||||||||| |||||| || ||||||| ||||   ||||| | ||||||||
Sbjct: 1495 tctcccattgacttatatgcaacctcggcaggtctgagatgccggatttacagattctga 1554

                                         
Query: 151  cttgttgccgccttggggtataataaatc 179
            ||| ||    |||||||||||||||||||
Sbjct: 1555 cttttttgatccttggggtataataaatc 1583



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 229  gtttttagcattcggactttaataaataacccc 261
            |||||| ||||||||| ||||||||||| ||||
Sbjct: 1653 gtttttggcattcggagtttaataaatagcccc 1685
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>gb|BC108492.1| Xenopus laevis ring finger protein 11, mRNA (cDNA clone MGC:130820
            IMAGE:7207751), complete cds
          Length = 2291

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||||||||||||||| |||||| || ||||||| ||||   ||||| | ||||||||
Sbjct: 1427 tctcccattgacttatatgcaacctcggcaggtctgagatgccggatttacagattctga 1486

                                         
Query: 151  cttgttgccgccttggggtataataaatc 179
            ||| ||    |||||||||||||||||||
Sbjct: 1487 cttttttgatccttggggtataataaatc 1515



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 229  gtttttagcattcggactttaataaataacccc 261
            |||||| ||||||||| ||||||||||| ||||
Sbjct: 1587 gtttttggcattcggagtttaataaatagcccc 1619
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>gb|BC089272.1| Xenopus laevis cDNA clone MGC:85003 IMAGE:6325747, complete cds
          Length = 2719

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                        
Query: 92   ctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctgac 151
            |||| |||||||| |||||||||| || ||||||  ||||   |||||||||||||||||
Sbjct: 1954 ctcctattgacttgtatacaacctcggcaggtctaagatgccggattttcggattctgac 1895

                                        
Query: 152  ttgttgccgccttggggtataataaatc 179
            || || |  ||| |||||||||||||||
Sbjct: 1894 tttttccatcctcggggtataataaatc 1867



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 242  ggactttaataaataaccccct 263
            ||||||||||||||||||||||
Sbjct: 1789 ggactttaataaataaccccct 1768
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>gb|BC076763.1| Xenopus laevis cysteine-rich hydrophobic domain 2, mRNA (cDNA clone
            MGC:83140 IMAGE:6318724), complete cds
          Length = 1650

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                
Query: 230  tttttagcattcggactttaataaataaccccctta 265
            ||||| ||||||||||||||||||||||||||||||
Sbjct: 1060 tttttggcattcggactttaataaataaccccctta 1025
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>gb|AF020551.1|AF020551 Xenopus laevis ribosomal protein S6 (rpS6) gene, complete cds
          Length = 7157

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                   
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggat 145
            ||||||||||||||||||||||||| || ||||||| |||| | |||||| ||||
Sbjct: 5082 tctcccattgacttatatacaacctcggcaggtctgagatgcaggatttttggat 5136



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 230  tttttagcattcggactttaataaataacccccttaaagt 269
            ||||| ||||| |||||||||||||||||||||| |||||
Sbjct: 5214 tttttggcatttggactttaataaataaccccctaaaagt 5253
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>gb|BC060454.1| Xenopus laevis hypothetical protein MGC68521, mRNA (cDNA clone
            MGC:68521 IMAGE:4030815), complete cds
          Length = 4680

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                   
Query: 88   acctctcccattgacttatatacaaccttggaaggtctg 126
            |||||||||||||||||||||||||||| || |||||||
Sbjct: 3435 acctctcccattgacttatatacaacctcggcaggtctg 3473
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>gb|BC108566.1| Xenopus laevis cDNA clone MGC:131047 IMAGE:7980906, complete cds
          Length = 2028

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 228  agtttttagcattcggactttaataaataacccc 261
            ||||||| ||||||||||||||||||||||||||
Sbjct: 1460 agtttttggcattcggactttaataaataacccc 1427



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 238  attcggactttaataaataaccccctta 265
            ||||||| ||| ||||||||||||||||
Sbjct: 1809 attcggattttgataaataaccccctta 1836



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 52/63 (82%)
 Strand = Plus / Minus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            ||||||||| ||||||||||||| | |  ||||| | ||||   ||||||||| ||||||
Sbjct: 1592 tctcccattaacttatatacaacttcgtcaggtcagagatgccagattttcgggttctga 1533

               
Query: 151  ctt 153
            |||
Sbjct: 1532 ctt 1530
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>gb|BC076787.1| Xenopus laevis cell division cycle associated 4, mRNA (cDNA clone
            MGC:83704 IMAGE:6638525), complete cds
          Length = 3729

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 93   tcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctgact 152
            |||||||||||||||| ||||||||  ||||||| ||||   ||||||| ||||||||||
Sbjct: 3523 tcccattgacttatatgcaaccttgacaggtctgagatgccggattttcagattctgact 3582

             
Query: 153  t 153
            |
Sbjct: 3583 t 3583
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>gb|BC079982.1| Xenopus laevis MGC81211 protein, mRNA (cDNA clone MGC:81211
            IMAGE:6318648), complete cds
          Length = 1729

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 227  aagtttttagcattcggactttaataaataaccccctt 264
            ||||||||  ||||||||||||||||||||||||||||
Sbjct: 1160 aagtttttgtcattcggactttaataaataaccccctt 1123



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 88   acctctcccattgacttatatacaaccttggaaggtctgngat 130
            ||||||||||||||| |||||||||||| || ||||||| |||
Sbjct: 1321 acctctcccattgacctatatacaacctcggcaggtctgagat 1279
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>gb|BC041715.1| Xenopus laevis CDC37 cell division cycle 37 homolog (S. cerevisiae),
            mRNA (cDNA clone MGC:52623 IMAGE:4681296), complete cds
          Length = 2401

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 229  gtttttagcattcggactttaataaataacccccttaa 266
            |||||| |||||||||||||||||| ||||||||||||
Sbjct: 1648 gtttttggcattcggactttaataagtaacccccttaa 1611



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||||||| ||||||||||||||  | ||||||| ||||   |||| || |||| |||
Sbjct: 1808 tctcccattggcttatatacaacctcagcaggtctgagatgccggattctcagattttga 1749

                                         
Query: 151  cttgttgccgccttggggtataataaatc 179
            | | || |  |||||||||||||||||||
Sbjct: 1748 cattttccatccttggggtataataaatc 1720
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>gb|BC045032.1| Xenopus laevis x-ray repair cross-complementing group 1 protein, mRNA
            (cDNA clone MGC:53197 IMAGE:5543195), complete cds
          Length = 3698

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 228  agtttttagcattcggactttaataaataacccc 261
            ||||||| ||||||||||||||||||||||||||
Sbjct: 2816 agtttttggcattcggactttaataaataacccc 2783



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 71/87 (81%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                        
Query: 93   tcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctgact 152
            ||||| ||| ||||| ||||||| || ||||||| |||||||   |||||||||| ||| 
Sbjct: 2926 tcccactgatttatacacaacctcggcaggtctgagatggat---tttcggattcagacc 2870

                                       
Query: 153  tgttgccgccttggggtataataaatc 179
            | || |  ||| |||||||||||||||
Sbjct: 2869 ttttccatcctcggggtataataaatc 2843
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>gb|AY429516.1| Xenopus laevis retinal ABCA4 transporter (ABCA4) mRNA, complete cds
          Length = 9038

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatg 131
            ||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 7889 tctcccattgacttatatacaacctcggcaggtctgagatg 7849



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 228  agtttttagcattcggactttaataaataaccccct 263
            ||||||| ||||||||||||||||||| ||||||||
Sbjct: 7731 agtttttggcattcggactttaataaagaaccccct 7696
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>gb|DQ096851.1| Xenopus laevis endod mRNA, complete sequence
          Length = 2927

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 68  aacttccaattaggatagcaacctctcccattgacttatatacaaccttggaaggtctgn 127
           ||||||||| ||||||||  |||||||||||||||||  | ||||||| || ||||||| 
Sbjct: 369 aacttccaaataggatagggacctctcccattgactttaacacaacctgggcaggtctga 310

               
Query: 128 gatg 131
           ||||
Sbjct: 309 gatg 306



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 231 ttttagcattcggactttaataaataaccccct 263
           |||| ||||||||||||||||||||||||||||
Sbjct: 74  ttttggcattcggactttaataaataaccccct 106



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 226 aaagtttttagcattcggactttaataaataaccccc 262
           |||||||||||||||  ||||  ||||||||||||||
Sbjct: 201 aaagtttttagcattttgactgcaataaataaccccc 165
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>gb|BC077334.1| Xenopus laevis MGC80327 protein, mRNA (cDNA clone MGC:80327
            IMAGE:5073981), complete cds
          Length = 2563

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            ||||||||||||||||||||||| | || ||||||| ||||   ||||||| |||| |||
Sbjct: 1859 tctcccattgacttatatacaacatcggcaggtctgagatgctggattttcagattttga 1800

               
Query: 151  ctt 153
            |||
Sbjct: 1799 ctt 1797



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 228  agtttttagcattcggactttaataaataaccccc 262
            ||||||| || ||||||||||||||||||||||||
Sbjct: 1697 agtttttggccttcggactttaataaataaccccc 1663
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>gb|BC043788.1| Xenopus laevis osteoglycin, mRNA (cDNA clone MGC:53032
            IMAGE:5537299), complete cds
          Length = 4304

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||||||||||||||| ||||||||  ||||||| ||||   ||||||| ||||| ||
Sbjct: 1988 tctcccattgacttatatgcaaccttgacaggtctgagatgccggattttcagattcaga 1929

               
Query: 151  ctt 153
            |||
Sbjct: 1928 ctt 1926
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>gb|BC042346.1| Xenopus laevis CDC23 (cell division cycle 23, yeast, homolog), mRNA
            (cDNA clone MGC:52757 IMAGE:4684100), complete cds
          Length = 2422

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 228  agtttttagcattcggactttaataaataacc 259
            ||||||| ||||||||||||||||||||||||
Sbjct: 2138 agtttttggcattcggactttaataaataacc 2169
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>gb|BC082659.1| Xenopus laevis hypothetical LOC494676, mRNA (cDNA clone MGC:82486
            IMAGE:4959850), complete cds
          Length = 2547

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||||||||||||||| |||||| |  ||||||| ||||   ||||||| ||||||||
Sbjct: 1178 tctcccattgacttatatgcaacctcgacaggtctgagatgccggattttcagattctga 1119

               
Query: 151  ctt 153
            |||
Sbjct: 1118 ctt 1116
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>gb|AF410801.1|AF410801 Xenopus laevis nodal related 2 (Xnr2) gene, partial cds
          Length = 4552

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 100  gacttatatacaaccttggaaggtctgngatggatgattttcggattctg 149
            ||||||| ||||||||||| ||||||| |||||  |||||| ||||||||
Sbjct: 1585 gacttatctacaaccttggcaggtctgagatggcagatttttggattctg 1536



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 228  agtttttagcattcggactttaataaataa 257
            |||||||||||||| |||||||||||||||
Sbjct: 1454 agtttttagcattcagactttaataaataa 1425
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>gb|BC089173.1| Xenopus laevis cDNA clone MGC:98934 IMAGE:4174341, complete cds
          Length = 4583

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatg 131
            |||||||||||||||||| |||||| || ||||||| ||||
Sbjct: 4489 tctcccattgacttatatgcaacctcggcaggtctgagatg 4449
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>gb|BC077999.1| Xenopus laevis MGC82412 protein, mRNA (cDNA clone MGC:82412
            IMAGE:4633695), complete cds
          Length = 2623

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                        
Query: 43   ggctaaacccagngcagaccatgataacttccaattaggatagcaacctctcccattgac 102
            |||||||||||  | |||| ||||||||||| | ||  |||||   ||||||||||||||
Sbjct: 2186 ggctaaacccaccgaagacaatgataacttcaatttgtgataggtgcctctcccattgac 2245

                                                           
Query: 103  ttatatacaaccttggaaggtctgngatggatgattttcggattctg 149
            ||||| |  ||||||   |||||| |||||  ||||||| |||||||
Sbjct: 2246 ttatacaggaccttgactggtctgagatggcggattttcagattctg 2292
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>gb|BC082369.1| Xenopus laevis MGC81611 protein, mRNA (cDNA clone MGC:81611
            IMAGE:6863838), complete cds
          Length = 2517

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 227  aagtttttagcattcggactttaataaataaccccct 263
            |||||||| |||||| ||| |||||||||||||||||
Sbjct: 2293 aagtttttggcattcagaccttaataaataaccccct 2257



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 227  aagtttttagcattcggactttaataaataac 258
            |||||||| |||||  ||||||||||||||||
Sbjct: 1913 aagtttttggcatttagactttaataaataac 1882
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>gb|BC074483.1| Xenopus laevis MGC84788 protein, mRNA (cDNA clone MGC:84788
            IMAGE:6952079), complete cds
          Length = 1754

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 135  gattttcggattctgacttgttgccgccttggggtataataaatc 179
            ||||||| ||||||||||| || |  |||||||||||||||||||
Sbjct: 1061 gattttcagattctgactttttccatccttggggtataataaatc 1105
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>gb|BC070740.1| Xenopus laevis hypothetical protein MGC83734, mRNA (cDNA clone
            MGC:83734 IMAGE:6639900), complete cds
          Length = 1943

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                        
Query: 97   attgacttatatacaaccttggaaggtctgngatggatgattttcggattctgacttgtt 156
            ||||||||||||| |||||||| ||||||| ||||   |||||| | |||| ||||| ||
Sbjct: 1579 attgacttatatagaaccttggtaggtctgtgatgctggatttttgaattcagacttttt 1520

                                    
Query: 157  gccgccttggggtataataaatct 180
             |  ||| ||| ||||||||||||
Sbjct: 1519 ccatcctcgggttataataaatct 1496
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>gb|AF387815.1|AF387815 Xenopus laevis LIM protein prickle (PRICKLE) mRNA, complete cds
          Length = 4579

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 230  tttttagcattcggactttaataaataac 258
            ||||| |||||||||||||||||||||||
Sbjct: 3614 tttttggcattcggactttaataaataac 3642



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 136  attttcggattctgacttgttgccgccttggggtataataaatc 179
            |||||||||||| ||||| | || ||||||||| | ||||||||
Sbjct: 3497 attttcggattcagacttttagcagccttgggggaaaataaatc 3540
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>gb|BC097901.1| Xenopus laevis cDNA clone IMAGE:6325995
          Length = 735

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 230 tttttagcattcggactttaataaataaccccc 262
           ||||| |||||| ||||||||||||||||||||
Sbjct: 721 tttttggcattcagactttaataaataaccccc 689
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>gb|BC056026.1| Xenopus laevis mitogen-activated protein kinase kinase 1 interacting
            protein 1, mRNA (cDNA clone MGC:68959 IMAGE:4959416),
            complete cds
          Length = 1993

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||||||||||||||| |||||| |  ||||||| ||||   ||||||| ||||| ||
Sbjct: 1526 tctcccattgacttatatgcaacctcgacaggtctgagatgccggattttctgattcaga 1585

               
Query: 151  ctt 153
            |||
Sbjct: 1586 ctt 1588



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 238  attcggactttaataaataaccccc 262
            ||||||||||| |||||||||||||
Sbjct: 1294 attcggactttgataaataaccccc 1270
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>gb|AF410903.1|AF410903S1 Xenopus laevis nodal related protein Xnr1 gene, exon 1 and partial
            cds
          Length = 5451

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 135  gattttcggattctgacttgttgccgccttggggtataataaat 178
            ||||||||||||| ||||| || |  ||||||||||||||||||
Sbjct: 2752 gattttcggattcagactttttccatccttggggtataataaat 2709
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>emb|AJ314758.1|XLA314758 Xenopus laevis IL-1b gene for interleukin 1 beta
          Length = 5981

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 239  ttcggactttaataaataacccccttaaagta 270
            |||||||| |||||||||||||||| ||||||
Sbjct: 2856 ttcggactataataaataaccccctaaaagta 2825



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 89   cctctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattct 148
            ||||||||||||| ||||| |  ||||||  ||||||| |||||  |||||| |||||||
Sbjct: 3007 cctctcccattgatttatacaagaccttgacaggtctgagatggcagatttttggattct 2948

             
Query: 149  g 149
            |
Sbjct: 2947 g 2947
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>dbj|AB175888.1| Xenopus laevis FSH beta mRNA for follicle-stimulating hormone
            beta-subunit, complete cds
          Length = 2784

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 135  gattttcggattctgacttgttgccgccttggggtataataaat 178
            ||||||||||||||||||| || |  ||| ||||||||||||||
Sbjct: 2081 gattttcggattctgactttttccatcctcggggtataataaat 2124
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>gb|BC084860.1| Xenopus laevis hypothetical LOC495390, mRNA (cDNA clone MGC:85502
            IMAGE:6940511), complete cds
          Length = 3512

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 226  aaagtttttagcattcggactttaataaataacccc 261
            ||||||||| |||||| ||| |||||||||||||||
Sbjct: 2300 aaagtttttggcattcagacgttaataaataacccc 2265



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctga 150
            |||||| |||||||| ||||||||| |  ||||||| ||||    | |||||||||| ||
Sbjct: 2400 tctccctttgacttagatacaacctcgtcaggtctgagatgccgtaatttcggattcaga 2341

                                         
Query: 151  cttgttgccgccttggggtataataaatc 179
            ||| || |   ||||||||||||||||||
Sbjct: 2340 ctttttccattcttggggtataataaatc 2312
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>gb|BC081256.1| Xenopus laevis cDNA clone IMAGE:3403752
          Length = 5556

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 92   ctcccattgacttatatacaaccttggaaggtctgngatggatgattttcggattctgac 151
            ||||||||||||   ||||||||||||  |||||| ||||   |||||| ||||||||||
Sbjct: 5407 ctcccattgactcccatacaaccttggctggtctgagatgccggatttttggattctgac 5466

              
Query: 152  tt 153
            ||
Sbjct: 5467 tt 5468
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>gb|BC070815.1| Xenopus laevis hypothetical protein MGC83892, mRNA (cDNA clone
            MGC:83892 IMAGE:6859020), complete cds
          Length = 1955

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 229  gtttttagcattcggactttaataaataaccccct 263
            ||||||| ||||  |||||||||||||||||||||
Sbjct: 1008 gtttttaccattgcgactttaataaataaccccct 1042
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>gb|BC046719.1| Xenopus laevis profilin II, mRNA (cDNA clone MGC:53719
            IMAGE:4930120), complete cds
          Length = 3010

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 229  gtttttagcattcggactttaataaataaccccct 263
            |||||| ||||||||| |||| |||||||||||||
Sbjct: 1285 gtttttggcattcggagtttagtaaataaccccct 1251
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>emb|X59369.1|XLPOMCB X.laevis POMC-B gene for proopiomelanocortin-B
          Length = 7770

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 228  agtttttagcattcggactttaataaataaccccc 262
            ||||||||||||| ||| || ||||||||||||||
Sbjct: 2623 agtttttagcatttggagttcaataaataaccccc 2657
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>gb|BC089134.1| Xenopus laevis cDNA clone MGC:85123 IMAGE:6868547, complete cds
          Length = 1729

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 231  ttttagcattcggactttaataaataacccccttaaagt 269
            |||| |||||| ||||||||||||| ||||||| |||||
Sbjct: 1471 ttttcgcattcagactttaataaattaccccctaaaagt 1433
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>gb|BC081220.1| Xenopus laevis MGC85250 protein, mRNA (cDNA clone MGC:85250
            IMAGE:6873325), complete cds
          Length = 2516

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatg 131
            |||||||||||||||||| |||||| |  ||||||| ||||
Sbjct: 2376 tctcccattgacttatatgcaacctcgacaggtctgagatg 2336
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>gb|BC080102.1| Xenopus laevis MGC84380 protein, mRNA (cDNA clone MGC:84380
            IMAGE:6959498), complete cds
          Length = 2668

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Plus

                                          
Query: 228  agtttttagcattcggactttaataaataa 257
            |||||||||||||||| |||||||||||||
Sbjct: 2362 agtttttagcattcgg-ctttaataaataa 2390
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>gb|BC074481.1| Xenopus laevis MGC84786 protein, mRNA (cDNA clone MGC:84786
            IMAGE:6951907), complete cds
          Length = 3722

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatg 131
            ||||||||||||||||||  |||||||  ||||||| ||||
Sbjct: 2803 tctcccattgacttatatggaaccttgacaggtctgagatg 2763
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>gb|BC072346.1| Xenopus laevis hypothetical protein MGC83482, mRNA (cDNA clone
            MGC:83482 IMAGE:3404672), complete cds
          Length = 3268

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 88   acctctcccattgacttatata 109
            ||||||||||||||||||||||
Sbjct: 1963 acctctcccattgacttatata 1942
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>gb|BC072294.1| Xenopus laevis hypothetical protein MGC82474, mRNA (cDNA clone
            MGC:82474 IMAGE:4959159), complete cds
          Length = 5392

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatg 131
            |||||||||||||||||| || ||| || ||||||| ||||
Sbjct: 2268 tctcccattgacttatatgcatcctcggcaggtctgagatg 2308



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 237  cattcggactttaataaataacccc 261
            ||||| |||||||||||||||||||
Sbjct: 2380 cattcagactttaataaataacccc 2404
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>gb|BC068666.1| Xenopus laevis hypothetical protein MGC81054, mRNA (cDNA clone
            MGC:81054 IMAGE:6316293), complete cds
          Length = 1628

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 238  attcggactttaataaataaccccct 263
            ||||||||||| ||||||||||||||
Sbjct: 1003 attcggactttgataaataaccccct 1028
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>gb|BC070999.1| Xenopus laevis cDNA clone MGC:80022 IMAGE:3401636, complete cds
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 238 attcggactttaataaataacccccttaaa 267
           |||||||| || ||||||||||||||||||
Sbjct: 613 attcggaccttgataaataacccccttaaa 584
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>gb|BC084087.1| Xenopus laevis hypothetical LOC495001, mRNA (cDNA clone MGC:82429
            IMAGE:4680294), complete cds
          Length = 2510

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 91   tctcccattgacttatatacaaccttggaaggtctgngatg 131
            |||||||||||||||||| |||||| |  ||||||| ||||
Sbjct: 1964 tctcccattgacttatatgcaacctcgacaggtctgagatg 2004
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>gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, complete sequence
          Length = 196761

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   taaatctgggtttattttcca 194
             |||||||||||||||||||||
Sbjct: 50379 taaatctgggtttattttcca 50359
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>gb|BC087328.1| Xenopus laevis similar to integrin, beta-like 1 (with EGF-like repeat
            domains), mRNA (cDNA clone MGC:99074 IMAGE:7203886),
            complete cds
          Length = 1824

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 291  tttccatttgcctttgcacgt 311
            |||||||||||||||||||||
Sbjct: 1536 tttccatttgcctttgcacgt 1516
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>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete sequence
          Length = 201050

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 249    aataaataacccccttaaagtaatg 273
              |||||||||||||||||||| ||||
Sbjct: 178431 aataaataacccccttaaagaaatg 178407
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>gb|BC082378.1| Xenopus laevis MGC81710 protein, mRNA (cDNA clone MGC:81710
            IMAGE:6865015), complete cds
          Length = 4582

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 109  acaaccttggaaggtctgngatggatgattttcggattct 148
            ||||||| || ||||||| |||||  ||||||||||||||
Sbjct: 3608 acaacctcggcaggtctgggatggcagattttcggattct 3647
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>gb|BC081150.1| Xenopus laevis MGC84207 protein, mRNA (cDNA clone MGC:84207
            IMAGE:6954623), complete cds
          Length = 2187

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 230  tttttagcattcggactttaataaataacccccttaa 266
            |||| |||||||||| |||| ||||||||||| ||||
Sbjct: 2004 ttttaagcattcggagtttagtaaataaccccattaa 2040
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>gb|AC100986.9| Mus musculus chromosome 3, clone RP23-77E5, complete sequence
          Length = 112141

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 250   ataaataacccccttaaagtaatgt 274
             ||||||||||||||||||| |||||
Sbjct: 50262 ataaataacccccttaaagaaatgt 50286
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>gb|BC070847.1| Xenopus laevis hypothetical protein LOC432046, mRNA (cDNA clone
            IMAGE:6639794), partial cds
          Length = 2903

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                     
Query: 235  agcattcggactttaataaataacccccttaaagtaatgtt 275
            |||||| |||||||||||||| ||||||| |||||| ||||
Sbjct: 2329 agcatttggactttaataaat-accccctcaaagtattgtt 2368
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>gb|AC165348.3| Mus musculus BAC clone RP23-300C11 from chromosome 3, complete sequence
          Length = 198637

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 250   ataaataacccccttaaagtaatgt 274
             ||||||||||||||||||| |||||
Sbjct: 18792 ataaataacccccttaaagaaatgt 18768
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>gb|BC046744.1| Xenopus laevis similar to integrin, beta-like 1 (with EGF-like repeat
            domains), mRNA (cDNA clone IMAGE:5542921), partial cds
          Length = 2317

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 291  tttccatttgcctttgcacgt 311
            |||||||||||||||||||||
Sbjct: 1527 tttccatttgcctttgcacgt 1507
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>gb|DQ096850.1| Xenopus laevis tram1 mRNA, complete sequence
          Length = 1178

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 231  ttttagcattcggactttaataaataaccccct 263
            |||| ||||||||| |||| |||||||||||||
Sbjct: 1124 tttttgcattcggagtttagtaaataaccccct 1092
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>gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, complete sequence
          Length = 191966

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 248   taataaataacccccttaaag 268
             |||||||||||||||||||||
Sbjct: 71408 taataaataacccccttaaag 71388
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>gb|BC110703.1| Xenopus laevis cDNA clone MGC:130645 IMAGE:7978244, complete cds
          Length = 2105

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 91   tctcccattgacttatatacaacct 115
            |||||||||||||||||| ||||||
Sbjct: 1864 tctcccattgacttatatgcaacct 1840



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 231  ttttagcattcggactttaataaataaccccct 263
            |||| ||||||||| |||| |||||||||||||
Sbjct: 1711 tttttgcattcggagtttagtaaataaccccct 1679
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>gb|BC110935.1| Xenopus laevis cDNA clone IMAGE:6859066, partial cds
          Length = 4864

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 243  gactttaataaataaccccct 263
            |||||||||||||||||||||
Sbjct: 3995 gactttaataaataaccccct 3975
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 136    attttcggattctgacttgtt 156
              |||||||||||||||||||||
Sbjct: 505715 attttcggattctgacttgtt 505735
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>gb|DQ241814.1| Xenopus laevis titin novex-3 (TN3) mRNA, partial cds
          Length = 2771

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 228  agtttttagcattcggactttaataaat 255
            ||||||| ||||| ||||||||||||||
Sbjct: 1972 agtttttggcatttggactttaataaat 1945
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>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence
          Length = 223142

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 250   ataaataacccccttaaagtaatg 273
             ||||||||||||||||||| ||||
Sbjct: 56330 ataaataacccccttaaagaaatg 56353
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>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence
          Length = 186860

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 250    ataaataacccccttaaagtaatg 273
              ||||||||||||||||||| ||||
Sbjct: 149028 ataaataacccccttaaagaaatg 149051
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>gb|BC082661.1| Xenopus laevis cDNA clone IMAGE:4965447
          Length = 2351

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 238  attcggactttaataaataaccccctta 265
            |||||||| || ||||||||||||||||
Sbjct: 1585 attcggaccttgataaataaccccctta 1612
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>gb|BC074319.1| Xenopus laevis MGC84142 protein, mRNA (cDNA clone MGC:84142
            IMAGE:6951303), complete cds
          Length = 2568

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  tttaataaataaccccctta 265
            ||||||||||||||||||||
Sbjct: 2436 tttaataaataaccccctta 2417
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>gb|BC073405.1| Xenopus laevis MGC80868 protein, mRNA (cDNA clone MGC:80868
            IMAGE:5514901), complete cds
          Length = 5538

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   acctctcccattgacttata 107
            ||||||||||||||||||||
Sbjct: 4942 acctctcccattgacttata 4961
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>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 282    ggccattagtttccatttgcctttgcac 309
              |||| ||||||||| |||||||||||||
Sbjct: 156785 ggccgttagtttccctttgcctttgcac 156758
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>gb|BC060755.1| Xenopus laevis hypothetical protein MGC69083, mRNA (cDNA clone
            MGC:69083 IMAGE:4969000), complete cds
          Length = 6129

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   acctctcccattgacttata 107
            ||||||||||||||||||||
Sbjct: 4986 acctctcccattgacttata 5005
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>gb|BC061947.1| Xenopus laevis Kit receptor tyrosine kinase homolog, mRNA (cDNA clone
            MGC:68524 IMAGE:4030854), complete cds
          Length = 6024

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  ttaataaataacccccttaa 266
            ||||||||||||||||||||
Sbjct: 4684 ttaataaataacccccttaa 4703
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>gb|AC154548.3| Mus musculus BAC clone RP23-437N23 from chromosome 13, complete
             sequence
          Length = 173722

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   ataataaatctgggtttattttcc 193
             ||||||||| ||||||||||||||
Sbjct: 88192 ataataaatatgggtttattttcc 88215
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>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence
          Length = 199946

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    aataaataacccccttaaag 268
              ||||||||||||||||||||
Sbjct: 129781 aataaataacccccttaaag 129762
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>gb|AC016395.5| Homo sapiens chromosome 10 clone RP11-153K11, complete sequence
          Length = 166869

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 171    taataaatctgggtttattttcca 194
              |||||||| |||||||||||||||
Sbjct: 160264 taataaatttgggtttattttcca 160287
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>gb|AC110011.3| Homo sapiens chromosome 5 clone RP11-536N17, complete sequence
          Length = 85975

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ccattagtttccatttgcct 303
             ||||||||||||||||||||
Sbjct: 15606 ccattagtttccatttgcct 15587
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>gb|AC128031.4| Rattus norvegicus  BAC CH230-418E23 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 176784

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   aataaataacccccttaaag 268
             ||||||||||||||||||||
Sbjct: 88713 aataaataacccccttaaag 88694
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>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence
          Length = 198179

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    aataaataacccccttaaag 268
              ||||||||||||||||||||
Sbjct: 170469 aataaataacccccttaaag 170488
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>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    ccattagtttccatttgcct 303
              ||||||||||||||||||||
Sbjct: 146031 ccattagtttccatttgcct 146012
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>gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O22, complete sequence
          Length = 209114

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    ataataaatctgggtttattttcc 193
              ||||||||||||| ||||||||||
Sbjct: 100905 ataataaatctggttttattttcc 100882
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>gb|BC094193.1| Xenopus laevis cDNA clone IMAGE:6950416
          Length = 2249

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  acctctcccattgacttata 107
           ||||||||||||||||||||
Sbjct: 951 acctctcccattgacttata 932
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>emb|AJ428933.1|XLA428933 Xenopus laevis partial beta-TrCP gene, exon 4
          Length = 3076

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   acctctcccattgacttata 107
            ||||||||||||||||||||
Sbjct: 2837 acctctcccattgacttata 2818
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>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete
              sequence
          Length = 210982

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    aacccccttaaagtaatgtt 275
              ||||||||||||||||||||
Sbjct: 182117 aacccccttaaagtaatgtt 182136
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>gb|BC043885.1| Xenopus laevis titin novex-3, mRNA (cDNA clone IMAGE:5537366),
            partial cds
          Length = 2771

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 228  agtttttagcattcggactttaataaat 255
            ||||||| ||||| ||||||||||||||
Sbjct: 1972 agtttttggcatttggactttaataaat 1945
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>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 282   ggccattagtttccatttgcctttgcac 309
             |||| ||||||||| |||||||||||||
Sbjct: 50275 ggccgttagtttccctttgcctttgcac 50302
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>emb|AL627252.16| Mouse DNA sequence from clone RP23-272P17 on chromosome 11, complete
            sequence
          Length = 137878

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  aataaataacccccttaaag 268
            ||||||||||||||||||||
Sbjct: 4251 aataaataacccccttaaag 4270


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,777,194
Number of Sequences: 3902068
Number of extensions: 2777194
Number of successful extensions: 55759
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 55586
Number of HSP's gapped (non-prelim): 169
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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