Clone Name | rbasd1f20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DNAE2_BORPA (Q7W9W1) Error-prone DNA polymerase (EC 2.7.7.7) | 32 | 1.6 | 2 | DNAE2_BORBR (Q7WHW8) Error-prone DNA polymerase (EC 2.7.7.7) | 32 | 1.6 | 3 | THNB_PHOLI (P59358) Ligatoxin B | 32 | 1.6 | 4 | HUNB_DROTA (O46260) Protein hunchback (Fragments) | 31 | 2.7 | 5 | PROS_DROVI (Q9U6A1) Protein prospero | 30 | 4.6 | 6 | THN_PHOTO (P01539) Phoratoxin | 30 | 7.8 |
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>DNAE2_BORPA (Q7W9W1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1052 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Frame = -1 Query: 600 EVEHNRKKHTVCEALEWFSQRISEERALPSIQHPLYLPKDIFVLLPKVLRLHQRLVDPIL 421 + EH R++ E +++ ++ +RA + Y P+ + + L + ++D + Sbjct: 395 DFEHQRRE----EVIQYIYEKYGRQRAALTAVVISYRPRSVLRDTGRALGVDNGIIDAVA 450 Query: 420 SARQLW----------SACQIDPAARM 370 A Q W +AC +DPA+R+ Sbjct: 451 RAHQWWDGKKEMLRSLAACGLDPASRV 477
>DNAE2_BORBR (Q7WHW8) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1052 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Frame = -1 Query: 600 EVEHNRKKHTVCEALEWFSQRISEERALPSIQHPLYLPKDIFVLLPKVLRLHQRLVDPIL 421 + EH R++ E +++ ++ +RA + Y P+ + + L + ++D + Sbjct: 395 DFEHQRRE----EVIQYIYEKYGRQRAALTAVVISYRPRSVLRDTGRALGVDNGIIDAVA 450 Query: 420 SARQLW----------SACQIDPAARM 370 A Q W +AC +DPA+R+ Sbjct: 451 RAHQWWDGKKEMLRSLAACGLDPASRV 477
>THNB_PHOLI (P59358) Ligatoxin B| Length = 46 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 429 PILSARQLWSACQIDPAAR-MCAPCRGCKEVVEQMEAHGWSH 307 P +AR +++ C++ A+R +CA GCK + GW+H Sbjct: 5 PSTTARNIYNTCRLTGASRSVCASLSGCKIISGSTCDSGWNH 46
>HUNB_DROTA (O46260) Protein hunchback (Fragments)| Length = 192 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +2 Query: 137 HFHVSHRSFHIQRNSN--SPHALPLNVKVQTINPT*QLGEKIAHQETQK 277 H H +H S H NSN SPH PL N QL + + Q+ Q+ Sbjct: 20 HHHHAHHSHHADSNSNASSPHQSPLPSPNPPSNTNLQLEQYLKQQQQQQ 68
>PROS_DROVI (Q9U6A1) Protein prospero| Length = 1556 Score = 30.4 bits (67), Expect = 4.6 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Frame = +1 Query: 142 SCESQELPHPAQFKQPACSPA--QC*SPNHQSNLAARGEDCPPRDTEARDDAQTLVFMAP 315 S +S LPHP PA A SP++++ L A D R +E T M P Sbjct: 1265 SRDSPPLPHPPTMLHPALLAAAHHGGSPDYKTCLRAV-MDAQDRQSECNSADMTFDGMQP 1323 Query: 316 TMSLHLLHNFLTSTAWGTHSSSWVNLAS 399 T+S S G HS VNL S Sbjct: 1324 TISFLKQQQQQQSQLSGAHSVPMVNLWS 1351
>THN_PHOTO (P01539) Phoratoxin| Length = 46 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -1 Query: 429 PILSARQLWSACQIDPAAR-MCAPCRGCKEVVEQMEAHGWSH 307 P +AR +++ C+ +R +CA GCK + GW+H Sbjct: 5 PTTTARNIYNTCRFGGGSRPVCAKLSGCKIISGTKCDSGWNH 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,195,538 Number of Sequences: 219361 Number of extensions: 2030001 Number of successful extensions: 6251 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6249 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)