ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GREM2_MOUSE (O88273) Gremlin-2 precursor (Cysteine knot superfam... 30 6.7
2GREM2_HUMAN (Q9H772) Gremlin-2 precursor (Cysteine knot superfam... 30 8.7

>GREM2_MOUSE (O88273) Gremlin-2 precursor (Cysteine knot superfamily 1, BMP|
           antagonist 2) (Protein related to DAN and cerberus)
          Length = 168

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = -1

Query: 545 WKLPLQVMVIIVLLSLADSNKNKLSGA 465
           WKL L ++++ VL+ +A++ KN+ +GA
Sbjct: 3   WKLSLTLLLVAVLVKVAETRKNRPAGA 29



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>GREM2_HUMAN (Q9H772) Gremlin-2 precursor (Cysteine knot superfamily 1, BMP|
           antagonist 2) (Protein related to DAN and cerberus)
          Length = 168

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -1

Query: 545 WKLPLQVMVIIVLLSLADSNKNKLSGA 465
           WKL L + ++ VL+ +A++ KN+ +GA
Sbjct: 3   WKLSLSLFLVAVLVKVAEARKNRPAGA 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,503,594
Number of Sequences: 219361
Number of extensions: 1681290
Number of successful extensions: 3368
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3368
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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