Clone Name | rbasd1f07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_463995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1046 Score = 48.1 bits (24), Expect = 0.013 Identities = 38/43 (88%) Strand = Plus / Minus Query: 130 ctactcgnaaatgggtagatcaggagccttattcttcgaccca 172 ||||||| | |||||||||||| ||| ||||||||| |||||| Sbjct: 804 ctactcgaagatgggtagatcaagaggcttattctttgaccca 762
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.013 Identities = 38/43 (88%) Strand = Plus / Plus Query: 130 ctactcgnaaatgggtagatcaggagccttattcttcgaccca 172 ||||||| | |||||||||||| ||| ||||||||| |||||| Sbjct: 1566396 ctactcgaagatgggtagatcaagaggcttattctttgaccca 1566438
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 48.1 bits (24), Expect = 0.013 Identities = 38/43 (88%) Strand = Plus / Plus Query: 130 ctactcgnaaatgggtagatcaggagccttattcttcgaccca 172 ||||||| | |||||||||||| ||| ||||||||| |||||| Sbjct: 3499 ctactcgaagatgggtagatcaagaggcttattctttgaccca 3541
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 48.1 bits (24), Expect = 0.013 Identities = 38/43 (88%) Strand = Plus / Plus Query: 130 ctactcgnaaatgggtagatcaggagccttattcttcgaccca 172 ||||||| | |||||||||||| ||| ||||||||| |||||| Sbjct: 129817 ctactcgaagatgggtagatcaagaggcttattctttgaccca 129859
>dbj|AK121866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103H03, full insert sequence Length = 1047 Score = 48.1 bits (24), Expect = 0.013 Identities = 38/43 (88%) Strand = Plus / Minus Query: 130 ctactcgnaaatgggtagatcaggagccttattcttcgaccca 172 ||||||| | |||||||||||| ||| ||||||||| |||||| Sbjct: 804 ctactcgaagatgggtagatcaagaggcttattctttgaccca 762
>gb|DQ463038.1| Sorghum propinquum putative protein phosphatase 2C gene, exon 1 and partial cds Length = 2837 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 atttcggttttcctagctct 131 |||||||||||||||||||| Sbjct: 48 atttcggttttcctagctct 67
>emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chromosome 13, complete sequence Length = 218144 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gaatcctttcctgtcagcaa 99 |||||||||||||||||||| Sbjct: 144258 gaatcctttcctgtcagcaa 144277
>emb|Z77132.1|CEF54D1 Caenorhabditis elegans Cosmid F54D1, complete sequence Length = 33266 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 attcttcgacccaacttctgcatt 183 ||||||| |||||||||||||||| Sbjct: 27948 attcttctacccaacttctgcatt 27971 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,598,062 Number of Sequences: 3902068 Number of extensions: 1598062 Number of successful extensions: 25657 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25643 Number of HSP's gapped (non-prelim): 14 length of query: 238 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 216 effective length of database: 17,147,199,772 effective search space: 3703795150752 effective search space used: 3703795150752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)