Clone Name | rbasd1f03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | 5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4 | 86 | 7e-17 |
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>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4| Length = 410 Score = 86.3 bits (212), Expect = 7e-17 Identities = 42/60 (70%), Positives = 51/60 (85%) Frame = -2 Query: 598 EKVKLFMGVLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLALLAPFAYFLEKKDR 419 E+VKL +LALQF AGFHIVSRAALNMG+SK+VF VYRN+++L L+ P AYFLEKK+R Sbjct: 15 ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74 Score = 35.8 bits (81), Expect = 0.11 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = -1 Query: 419 AAVILGDQLYTXXXXXXXXXXXXLYFVLWGKSEEKK 312 A++ILG+Q Y LY VLWGKSEEK+ Sbjct: 310 ASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKR 345 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,875,789 Number of Sequences: 219361 Number of extensions: 1059924 Number of successful extensions: 3367 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 3224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3364 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)