ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1e22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192800.1| Oryza sativa (japonica cultivar-group), predic... 115 2e-22
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
3dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
4gb|BC085949.1| Rattus norvegicus cytidine triphosphate synthase ... 50 0.009
5gb|BC085358.1| Rattus norvegicus cytidine triphosphate synthase ... 50 0.009
6ref|NM_001034998.1| Rattus norvegicus cytidine triphosphate synt... 50 0.009
7gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.037
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
9emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segme... 44 0.57
10gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 44 0.57
11ref|NM_118151.3| Arabidopsis thaliana CTP synthase/ catalytic AT... 42 2.3
12gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700,... 42 2.3
13gb|AC125361.4| Mus musculus BAC clone RP23-93M7 from chromosome ... 42 2.3
14emb|AL121982.19|HS1185H19 Human DNA sequence from clone RP5-1185... 42 2.3
15gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosom... 42 2.3
16gb|DQ397608.1| Cenarchaeum symbiosum clone C12B02, complete sequ... 42 2.3
17emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene 42 2.3
18gb|AE010319.1| Methanopyrus kandleri AV19 section 18 of 157 of t... 40 8.9
19gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.9
20gb|DP000015.1| Xenopus tropicalis target 1 genomic scaffold 40 8.9
21gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete... 40 8.9
22gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 8.9
23gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, comple... 40 8.9
24gb|AC007233.7| Arabidopsis thaliana chromosome 2 clone T25M19 ma... 40 8.9
25gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, co... 40 8.9
26gb|AC021979.6| Homo sapiens chromosome 15, clone RP11-30G8, comp... 40 8.9
27gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, com... 40 8.9
28emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 ... 40 8.9
29gb|AC068476.13| Homo sapiens chromosome 8, clone RP11-374B17, co... 40 8.9
30dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 8.9
31gb|AC067721.22| Homo sapiens 3 BAC RP11-111F10 (Roswell Park Can... 40 8.9
32gb|AC093570.30| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 8.9
33gb|AC138124.2| Homo sapiens 3 BAC RP11-191P21 (Roswell Park Canc... 40 8.9
34dbj|AB162894.1| Mus musculus munc13-1 gene for Munc13-1, complet... 40 8.9
35gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete se... 40 8.9
36gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 ... 40 8.9
37gb|AF115848.1|AF115848 Mus musculus renal munc13 mRNA, complete cds 40 8.9
38gb|AC149515.2| Xenopus tropicalis clone CH216-35C7, complete seq... 40 8.9
39dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.9
40gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 ... 40 8.9
41dbj|AB065664.1| Homo sapiens gene for seven transmembrane helix ... 40 8.9 
>ref|NM_192800.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1860

 Score =  115 bits (58), Expect = 2e-22
 Identities = 190/234 (81%)
 Strand = Plus / Minus

                                                                        
Query: 419  aaccacatggccattgcagctgtcctgcagcacctggtccagttgcccgcacgctgcagc 478
            |||||| ||||||||||||||| | |||||||     |||||||||||  | |  |||||
Sbjct: 1731 aaccacgtggccattgcagctgccttgcagcaatctatccagttgcccagatgaggcagc 1672

                                                                        
Query: 479  gattagtccgacaaatagaggtgaaggttttgaaggcgttgacttgaactccggatggaa 538
             |||||||||||||| || || || |||||||||||  |||||||||| || ||||||||
Sbjct: 1671 aattagtccgacaaagagtggagacggttttgaaggtcttgacttgaattcaggatggaa 1612

                                                                        
Query: 539  ttggacgccgatgaagaacgggtgatcaggtatttcaatgatctccattctctgtccagt 598
            |||  | || |  ||  |  ||||||  || |||||||| ||||||||||||  ||||||
Sbjct: 1611 ttgtgcaccaacaaaatatcggtgattggggatttcaattatctccattctccttccagt 1552

                                                                  
Query: 599  ctcgtccttgccaacaaactgaagtccggcattttcaaatgctggcaccatatc 652
            ||| || || ||||||||||||||||| |||||||||||  |||||||||||||
Sbjct: 1551 ctcatctttcccaacaaactgaagtccagcattttcaaactctggcaccatatc 1498
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 581      ctccattctctgtccagtctcgtccttgccaacaaactgaagtccggcattttcaaatgc 640
                ||||||||||  ||||||||| || || ||||||||||||||||| |||||||||||  |
Sbjct: 24495906 ctccattctccttccagtctcatctttcccaacaaactgaagtccagcattttcaaactc 24495965

                            
Query: 641      tggcaccatatc 652
                ||||||||||||
Sbjct: 24495966 tggcaccatatc 24495977



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 486      ccgacaaatagaggtgaaggttttgaaggcgttgacttgaactccggatggaattg 541
                |||||||| || || || |||||||||||  |||||||||| || |||||||||||
Sbjct: 24495732 ccgacaaagagtggagacggttttgaaggtcttgacttgaattcaggatggaattg 24495787



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 419      aaccacatggccattgcagctgtcctgcagca 450
                |||||| ||||||||||||||| | |||||||
Sbjct: 24495528 aaccacgtggccattgcagctgccttgcagca 24495559
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>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0686E09
          Length = 156425

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                         
Query: 581   ctccattctctgtccagtctcgtccttgccaacaaactgaagtccggcattttcaaatgc 640
             ||||||||||  ||||||||| || || ||||||||||||||||| |||||||||||  |
Sbjct: 76290 ctccattctccttccagtctcatctttcccaacaaactgaagtccagcattttcaaactc 76349

                         
Query: 641   tggcaccatatc 652
             ||||||||||||
Sbjct: 76350 tggcaccatatc 76361



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 486   ccgacaaatagaggtgaaggttttgaaggcgttgacttgaactccggatggaattg 541
             |||||||| || || || |||||||||||  |||||||||| || |||||||||||
Sbjct: 76116 ccgacaaagagtggagacggttttgaaggtcttgacttgaattcaggatggaattg 76171



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 419   aaccacatggccattgcagctgtcctgcagca 450
             |||||| ||||||||||||||| | |||||||
Sbjct: 75912 aaccacgtggccattgcagctgccttgcagca 75943
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>gb|BC085949.1| Rattus norvegicus cytidine triphosphate synthase II, mRNA (cDNA clone
            MGC:95203 IMAGE:7132135), complete cds
          Length = 2153

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 525  aactccggatggaattggacgccgatgaa 553
            ||||| |||||||||||||||||||||||
Sbjct: 1676 aactcaggatggaattggacgccgatgaa 1648
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>gb|BC085358.1| Rattus norvegicus cytidine triphosphate synthase II, mRNA (cDNA
           clone IMAGE:7300883), partial cds
          Length = 1220

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 525 aactccggatggaattggacgccgatgaa 553
           ||||| |||||||||||||||||||||||
Sbjct: 778 aactcaggatggaattggacgccgatgaa 750
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>ref|NM_001034998.1| Rattus norvegicus cytidine triphosphate synthase II (Ctps2), mRNA
          Length = 2153

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 525  aactccggatggaattggacgccgatgaa 553
            ||||| |||||||||||||||||||||||
Sbjct: 1676 aactcaggatggaattggacgccgatgaa 1648
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>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06,
              complete sequence
          Length = 160907

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 456    tccagttgcccgcacgctgcagcgattagtcc 487
              ||||||||||| |||| |||||||||||||||
Sbjct: 110101 tccagttgcccacacgatgcagcgattagtcc 110070



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 456   tccagttgcccgcacgctgcagcgattagtcc 487
             ||||||||||| |||| |||||||||||||||
Sbjct: 64299 tccagttgcccacacgatgcagcgattagtcc 64330
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 456      tccagttgcccgcacgctgcagcgattagtcc 487
                ||||||||||| |||| |||||||||||||||
Sbjct: 28177426 tccagttgcccacacgatgcagcgattagtcc 28177395



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 456      tccagttgcccgcacgctgcagcgattagtcc 487
                ||||||||||| |||| |||||||||||||||
Sbjct: 28131624 tccagttgcccacacgatgcagcgattagtcc 28131655
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>emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segment 2/6
          Length = 293250

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 512   aggcgttgacttgaactccggatggaattg 541
             |||| ||||||||||||| |||||||||||
Sbjct: 40559 aggccttgacttgaactctggatggaattg 40530
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 525     aactccggatggaattggacgccgatgaagaacgggtg 562
               ||||||||||||||||||  | |||||||||| |||||
Sbjct: 1552340 aactccggatggaattgggtggcgatgaagaaggggtg 1552377
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>ref|NM_118151.3| Arabidopsis thaliana CTP synthase/ catalytic AT4G20320 mRNA, complete
            cds
          Length = 2348

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 572  ttcaatgatctccattctctgtccagtctcgtc 604
            ||||||||||||||||| ||| || ||||||||
Sbjct: 1623 ttcaatgatctccattcgctgccctgtctcgtc 1591
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>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence
          Length = 410554

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 527    ctccggatggaattggacgccgatg 551
              |||||||||||| ||||||||||||
Sbjct: 340092 ctccggatggaactggacgccgatg 340116
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>gb|AC125361.4| Mus musculus BAC clone RP23-93M7 from chromosome 12, complete sequence
          Length = 202234

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    cacagaagacaggcaagaccc 262
              |||||||||||||||||||||
Sbjct: 173952 cacagaagacaggcaagaccc 173932
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>emb|AL121982.19|HS1185H19 Human DNA sequence from clone RP5-1185H19 on chromosome 1p13.1-13.3
             Contains two novel genes and a CpG island, complete
             sequence
          Length = 104780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 628   cattttcaaatgctggcacca 648
             |||||||||||||||||||||
Sbjct: 69385 cattttcaaatgctggcacca 69405
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>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete
             sequence
          Length = 202583

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   cacagaagacaggcaagaccc 262
             |||||||||||||||||||||
Sbjct: 93405 cacagaagacaggcaagaccc 93385
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>gb|DQ397608.1| Cenarchaeum symbiosum clone C12B02, complete sequence
          Length = 36797

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 525  aactccggatggaattggacgccgatgaagaac 557
            |||||||||||||| || |||||||| ||||||
Sbjct: 6971 aactccggatggaactgcacgccgataaagaac 7003
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>emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene
          Length = 6568

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 238  ggaccacagaagacaggcaag 258
            |||||||||||||||||||||
Sbjct: 5290 ggaccacagaagacaggcaag 5310
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>gb|AE010319.1| Methanopyrus kandleri AV19 section 18 of 157 of the complete genome
          Length = 10699

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 519  gacttgaactccggatggaa 538
            ||||||||||||||||||||
Sbjct: 2795 gacttgaactccggatggaa 2814
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 519     gacttgaactccggatggaa 538
               ||||||||||||||||||||
Sbjct: 1438640 gacttgaactccggatggaa 1438621
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>gb|DP000015.1| Xenopus tropicalis target 1 genomic scaffold
          Length = 292204

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 629   attttcaaatgctggcacca 648
             ||||||||||||||||||||
Sbjct: 95863 attttcaaatgctggcacca 95844
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>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence
          Length = 171000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    gttgctcagccattgtcgca 224
              ||||||||||||||||||||
Sbjct: 150032 gttgctcagccattgtcgca 150051
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     atatcagcacagaaccctaa 133
               ||||||||||||||||||||
Sbjct: 1191446 atatcagcacagaaccctaa 1191427
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>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence
          Length = 179881

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   gccacaaccacatggccatt 433
             ||||||||||||||||||||
Sbjct: 76236 gccacaaccacatggccatt 76217
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>gb|AC007233.7| Arabidopsis thaliana chromosome 2 clone T25M19 map ve013, complete
             sequence
          Length = 39858

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   gacaaatagaggtgaaggtt 507
             ||||||||||||||||||||
Sbjct: 13186 gacaaatagaggtgaaggtt 13205
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>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence
          Length = 187350

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 230    gaagatgaggaccacagaagacag 253
              ||||||||||||| ||||||||||
Sbjct: 187248 gaagatgaggaccgcagaagacag 187271
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>gb|AC021979.6| Homo sapiens chromosome 15, clone RP11-30G8, complete sequence
          Length = 190692

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   gaagatgaggaccacagaagacag 253
             ||||||||||||| ||||||||||
Sbjct: 21683 gaagatgaggaccgcagaagacag 21706
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>gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, complete sequence
          Length = 210074

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   gaagatgaggaccacagaagacag 253
             ||||||||||||| ||||||||||
Sbjct: 53000 gaagatgaggaccgcagaagacag 53023
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>emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 in linkage group 13,
             complete sequence
          Length = 194184

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   ctccattctctgtccagtct 600
             ||||||||||||||||||||
Sbjct: 78816 ctccattctctgtccagtct 78797
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>gb|AC068476.13| Homo sapiens chromosome 8, clone RP11-374B17, complete sequence
          Length = 205196

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tgcatatcagcacagaaccc 130
              ||||||||||||||||||||
Sbjct: 121895 tgcatatcagcacagaaccc 121876
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 519     gacttgaactccggatggaa 538
               ||||||||||||||||||||
Sbjct: 1049614 gacttgaactccggatggaa 1049633
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>gb|AC067721.22| Homo sapiens 3 BAC RP11-111F10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172953

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 571    tttcaatgatctccattctctgtc 594
              |||||||||||| |||||||||||
Sbjct: 145497 tttcaatgatctacattctctgtc 145520
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>gb|AC093570.30| Mus musculus strain C57BL/6J chromosome 5 clone rp23-115a12, complete
              sequence
          Length = 203838

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    tttagccacaaccacatggccatt 433
              ||||||||||| ||||||||||||
Sbjct: 143826 tttagccacaaacacatggccatt 143849
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>gb|AC138124.2| Homo sapiens 3 BAC RP11-191P21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 67971

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   ctcaattttccctgggctct 178
             ||||||||||||||||||||
Sbjct: 40627 ctcaattttccctgggctct 40608
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>dbj|AB162894.1| Mus musculus munc13-1 gene for Munc13-1, complete cds
          Length = 4773

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  gctctgggccgttgcccggc 193
            ||||||||||||||||||||
Sbjct: 1491 gctctgggccgttgcccggc 1510
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>gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete sequence
          Length = 137667

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   atatcagcacagaaccctaa 133
             ||||||||||||||||||||
Sbjct: 21071 atatcagcacagaaccctaa 21052
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>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete
              sequence
          Length = 346734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    gttgctcagccattgtcgca 224
              ||||||||||||||||||||
Sbjct: 194716 gttgctcagccattgtcgca 194735
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>gb|AF115848.1|AF115848 Mus musculus renal munc13 mRNA, complete cds
          Length = 6386

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  gctctgggccgttgcccggc 193
            ||||||||||||||||||||
Sbjct: 1789 gctctgggccgttgcccggc 1808
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>gb|AC149515.2| Xenopus tropicalis clone CH216-35C7, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 629   attttcaaatgctggcacca 648
             ||||||||||||||||||||
Sbjct: 91869 attttcaaatgctggcacca 91888
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>dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1007G5, complete
             sequences
          Length = 184643

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    aactttctaaaatgtctagctcat 75
             ||||||||||||||||| ||||||
Sbjct: 99938 aactttctaaaatgtcttgctcat 99915
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>gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 DS00164 (D269)), complete
             sequence
          Length = 86391

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   gttgctcagccattgtcgca 224
             ||||||||||||||||||||
Sbjct: 50848 gttgctcagccattgtcgca 50867
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>dbj|AB065664.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_227
          Length = 63155

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 571   tttcaatgatctccattctctgtc 594
             |||||||||||| |||||||||||
Sbjct: 48766 tttcaatgatctacattctctgtc 48743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,392,069
Number of Sequences: 3902068
Number of extensions: 5392069
Number of successful extensions: 92775
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92616
Number of HSP's gapped (non-prelim): 159
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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