ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1e20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC004964.2| Homo sapiens PAC clone RP5-1106G10 from 7, comple... 48 0.033
2emb|BX640407.9| Zebrafish DNA sequence from clone DKEY-208B10 in... 44 0.52
3gb|AC123752.8| Mus musculus chromosome 1, clone RP24-194N4, comp... 42 2.0
4gb|AY770656.1| Ceramium boydenii voucher C116 ribulose-1,5-bisph... 42 2.0
5gb|AC164419.3| Mus musculus chromosome 5, clone RP23-309G12, com... 42 2.0
6gb|AC102446.8| Mus musculus chromosome 5, clone RP24-201G17, com... 42 2.0
7gb|AC136754.4| Mus musculus chromosome 1, clone RP23-176K16, com... 42 2.0
8gb|AC022142.4| Homo sapiens chromosome 5 clone CTD-2341D24, comp... 42 2.0
9gb|AY945781.1| Ceramium boydenii isolate TC001 ribulose-1,5-bisp... 42 2.0
10gb|AC016567.8| Homo sapiens chromosome 5 clone CTC-564E20, compl... 42 2.0
11gb|AC008377.6| Homo sapiens chromosome 5 clone CTC-208O22, compl... 42 2.0
12gb|AC008653.8|AC008653 Homo sapiens chromosome 5 clone CTB-18M1,... 42 2.0
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
14gb|AC155293.3| Mus musculus BAC clone RP24-427L24 from chromosom... 42 2.0
15dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
17gb|AC138680.7| Mus musculus chromosome 1, clone RP23-373D7, comp... 40 8.1
18gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
19gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
20gb|AC147370.4| Mus musculus BAC clone RP24-243N3 from chromosome... 40 8.1
21gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 8.1
22gb|AC044805.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 8.1
23gb|DQ158858.1| Bigelowiella natans nucleomorph chromosome 3, par... 40 8.1
24gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosom... 40 8.1
25gb|AC127272.4| Mus musculus BAC clone RP24-63G5 from chromosome ... 40 8.1
26gb|AC122430.4| Mus musculus BAC clone RP24-176F14 from chromosom... 40 8.1
27gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, comple... 40 8.1
28gb|AC122053.3| Mus musculus BAC clone RP24-463C3 from 3, complet... 40 8.1
29ref|XM_647866.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.1
30ref|XM_718791.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.1
31ref|XM_725869.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.1
32gb|AC109217.7| Mus musculus chromosome 18, clone RP23-406P18, co... 40 8.1
33gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 8.1
34gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3... 40 8.1
35emb|AL008638.1|HS992D9 Human DNA sequence from clone CTA-992D9 o... 40 8.1
36emb|Z99531.1|SPAC19D5 S.pombe chromosome I cosmid c19D5 40 8.1
37emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 8.1
38emb|CR318610.8| Zebrafish DNA sequence from clone CH211-14B14 in... 40 8.1
39dbj|AK138265.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 8.1
40gb|AC090531.18| Homo sapiens 12q BAC RP11-413B19 (Roswell Park C... 40 8.1
41gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, com... 40 8.1
42ref|NM_001020331.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.1
43dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
44gb|AC007711.9|AC007711 Drosophila melanogaster, chromosome 3R, r... 40 8.1
45gb|AC055769.4|AC055769 Arabidopsis thaliana chromosome 1 BAC T9G... 40 8.1
46gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 8.1
47gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thali... 40 8.1
48dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 40 8.1
49gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, com... 40 8.1
50gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 40 8.1
51dbj|AK057885.1| Homo sapiens cDNA FLJ25156 fis, clone CBR07981 40 8.1
52gb|AE001439.1| Helicobacter pylori J99, complete genome 40 8.1
53emb|AL954673.5| Zebrafish DNA sequence from clone BUSM1-122B7 in... 40 8.1
54gb|U75480.2|SMU75480 Streptococcus mutans putative HPr(ser) kina... 40 8.1
55gb|AE003728.3| Drosophila melanogaster chromosome 3R, section 66... 40 8.1
56gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome... 40 8.1
57gb|AC121944.4| Mus musculus BAC clone RP24-211H19 from chromosom... 40 8.1
58gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosom... 40 8.1
59emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chro... 40 8.1
60dbj|AB051856.1| Drosophila melanogaster dHS6ST mRNA for heparan ... 40 8.1 
>gb|AC004964.2| Homo sapiens PAC clone RP5-1106G10 from 7, complete sequence
          Length = 78643

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 142   tctgttgtacaaaatgaaatctaaaaca 169
             ||||||| ||||||||||||||||||||
Sbjct: 35761 tctgttggacaaaatgaaatctaaaaca 35788
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>emb|BX640407.9| Zebrafish DNA sequence from clone DKEY-208B10 in linkage group 12,
             complete sequence
          Length = 89034

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 105   tcacaaaagtacatgtaaaaaa 126
             ||||||||||||||||||||||
Sbjct: 14259 tcacaaaagtacatgtaaaaaa 14238
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>gb|AC123752.8| Mus musculus chromosome 1, clone RP24-194N4, complete sequence
          Length = 223110

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 206  gggagtgaagtccttttgtttgctt 230
            |||||| ||||||||||||||||||
Sbjct: 8975 gggagtaaagtccttttgtttgctt 8999
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>gb|AY770656.1| Ceramium boydenii voucher C116 ribulose-1,5-bisphosphate
            carboxylase/oxygenase large subunit (rbcL) gene, partial
            cds; plastid
          Length = 1406

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 259  tataatacactattagaaact 279
            |||||||||||||||||||||
Sbjct: 984  tataatacactattagaaact 1004
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>gb|AC164419.3| Mus musculus chromosome 5, clone RP23-309G12, complete sequence
          Length = 159565

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   tgtttcttctcattaaaataa 474
             |||||||||||||||||||||
Sbjct: 50392 tgtttcttctcattaaaataa 50372
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>gb|AC102446.8| Mus musculus chromosome 5, clone RP24-201G17, complete sequence
          Length = 176748

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 454    tgtttcttctcattaaaataa 474
              |||||||||||||||||||||
Sbjct: 105455 tgtttcttctcattaaaataa 105435
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>gb|AC136754.4| Mus musculus chromosome 1, clone RP23-176K16, complete sequence
          Length = 212071

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 206   gggagtgaagtccttttgtttgctt 230
             |||||| ||||||||||||||||||
Sbjct: 94241 gggagtaaagtccttttgtttgctt 94217
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>gb|AC022142.4| Homo sapiens chromosome 5 clone CTD-2341D24, complete sequence
          Length = 173049

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    tacatgtaaaaaatgcatgca 134
              |||||||||||||||||||||
Sbjct: 136861 tacatgtaaaaaatgcatgca 136841
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>gb|AY945781.1| Ceramium boydenii isolate TC001 ribulose-1,5-bisphosphate
            carboxylase/oxygenase large subunit (rbcL) gene, partial
            cds; mitochondrial
          Length = 1425

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 259  tataatacactattagaaact 279
            |||||||||||||||||||||
Sbjct: 1003 tataatacactattagaaact 1023
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>gb|AC016567.8| Homo sapiens chromosome 5 clone CTC-564E20, complete sequence
          Length = 159734

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   tacatgtaaaaaatgcatgca 134
             |||||||||||||||||||||
Sbjct: 69756 tacatgtaaaaaatgcatgca 69736
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>gb|AC008377.6| Homo sapiens chromosome 5 clone CTC-208O22, complete sequence
          Length = 126454

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   tacatgtaaaaaatgcatgca 134
             |||||||||||||||||||||
Sbjct: 35231 tacatgtaaaaaatgcatgca 35251
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>gb|AC008653.8|AC008653 Homo sapiens chromosome 5 clone CTB-18M1, complete sequence
          Length = 173049

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    tacatgtaaaaaatgcatgca 134
              |||||||||||||||||||||
Sbjct: 136861 tacatgtaaaaaatgcatgca 136841
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 463      tcattaaaataagataaatta 483
                |||||||||||||||||||||
Sbjct: 33843709 tcattaaaataagataaatta 33843689
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>gb|AC155293.3| Mus musculus BAC clone RP24-427L24 from chromosome 12, complete
             sequence
          Length = 156472

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   ataggtcagcagaggcatttg 455
             |||||||||||||||||||||
Sbjct: 39018 ataggtcagcagaggcatttg 39038
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>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1695_H09
          Length = 114721

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   tcattaaaataagataaatta 483
             |||||||||||||||||||||
Sbjct: 60287 tcattaaaataagataaatta 60267
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>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1004_E04
          Length = 133621

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 463  tcattaaaataagataaatta 483
            |||||||||||||||||||||
Sbjct: 2672 tcattaaaataagataaatta 2652
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>gb|AC138680.7| Mus musculus chromosome 1, clone RP23-373D7, complete sequence
          Length = 175790

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    aaaataagataaattaatct 487
              ||||||||||||||||||||
Sbjct: 114817 aaaataagataaattaatct 114836
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>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11,
             complete sequence
          Length = 103615

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tttatttgtgtttatgcaat 570
             ||||||||||||||||||||
Sbjct: 39613 tttatttgtgtttatgcaat 39594
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21,
              complete sequence
          Length = 139074

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    tttatttgtgtttatgcaat 570
              ||||||||||||||||||||
Sbjct: 125686 tttatttgtgtttatgcaat 125667
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>gb|AC147370.4| Mus musculus BAC clone RP24-243N3 from chromosome 12, complete sequence
          Length = 162528

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aaaagtacatgtaaaaaatg 128
             ||||||||||||||||||||
Sbjct: 58183 aaaagtacatgtaaaaaatg 58202
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>gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-246M15,
           complete sequence
          Length = 113092

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 466 ttaaaataagataaattaat 485
           ||||||||||||||||||||
Sbjct: 218 ttaaaataagataaattaat 199
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>gb|AC044805.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-282L6, complete
              sequence
          Length = 208526

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    ttaaaataagataaattaat 485
              ||||||||||||||||||||
Sbjct: 182581 ttaaaataagataaattaat 182562
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>gb|DQ158858.1| Bigelowiella natans nucleomorph chromosome 3, partial sequence
          Length = 98136

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 570   ttattaattttgtactatat 589
             ||||||||||||||||||||
Sbjct: 65283 ttattaattttgtactatat 65264
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>gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosome 10, complete sequence
          Length = 236165

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 444    cagaggcatttgtttcttct 463
              ||||||||||||||||||||
Sbjct: 221609 cagaggcatttgtttcttct 221590
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>gb|AC127272.4| Mus musculus BAC clone RP24-63G5 from chromosome 18, complete sequence
          Length = 182591

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 450    catttgtttcttctcattaaaata 473
              |||||||||||||||| |||||||
Sbjct: 126715 catttgtttcttctcaataaaata 126738
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>gb|AC122430.4| Mus musculus BAC clone RP24-176F14 from chromosome 12, complete
             sequence
          Length = 172764

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   aaaagtacatgtaaaaaatg 128
             ||||||||||||||||||||
Sbjct: 15046 aaaagtacatgtaaaaaatg 15027
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>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence
          Length = 195428

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 544    gtaagcatttatttgtgttt 563
              ||||||||||||||||||||
Sbjct: 181820 gtaagcatttatttgtgttt 181839
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>gb|AC122053.3| Mus musculus BAC clone RP24-463C3 from 3, complete sequence
          Length = 151640

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  gtaagcatttatttgtgttt 563
            ||||||||||||||||||||
Sbjct: 2031 gtaagcatttatttgtgttt 2050
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>ref|XM_647866.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (99.t00031)
           partial mRNA
          Length = 1539

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 561 tttatgcaattattaatttt 580
           ||||||||||||||||||||
Sbjct: 299 tttatgcaattattaatttt 280
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>ref|XM_718791.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03694)
            partial mRNA
          Length = 8415

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 456  tttcttctcattaaaataagataaatta 483
            |||||| |||||||||||| ||||||||
Sbjct: 6579 tttcttttcattaaaataaaataaatta 6552
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>ref|XM_725869.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03001)
           partial mRNA
          Length = 2154

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 573 ttaattttgtactatataaa 592
           ||||||||||||||||||||
Sbjct: 524 ttaattttgtactatataaa 543
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>gb|AC109217.7| Mus musculus chromosome 18, clone RP23-406P18, complete sequence
          Length = 196301

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 450   catttgtttcttctcattaaaata 473
             |||||||||||||||| |||||||
Sbjct: 63773 catttgtttcttctcaataaaata 63796
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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 553    tatttgtgtttatgcaatta 572
              ||||||||||||||||||||
Sbjct: 109759 tatttgtgtttatgcaatta 109778
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>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete
              sequence
          Length = 252632

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 573    ttaattttgtactatataaa 592
              ||||||||||||||||||||
Sbjct: 107017 ttaattttgtactatataaa 106998
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>emb|AL008638.1|HS992D9 Human DNA sequence from clone CTA-992D9 on chromosome 22q12.1, complete
             sequence
          Length = 155147

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   ttctcattaaaataagataa 479
             ||||||||||||||||||||
Sbjct: 56971 ttctcattaaaataagataa 56990
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>emb|Z99531.1|SPAC19D5 S.pombe chromosome I cosmid c19D5
          Length = 30389

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   cagaggcatttgtttcttct 463
             ||||||||||||||||||||
Sbjct: 17343 cagaggcatttgtttcttct 17324
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 447     aggcatttgtttcttctcat 466
               ||||||||||||||||||||
Sbjct: 2226172 aggcatttgtttcttctcat 2226191
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>emb|CR318610.8| Zebrafish DNA sequence from clone CH211-14B14 in linkage group 5,
             complete sequence
          Length = 164564

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   catttatttgtgtttatgca 568
             ||||||||||||||||||||
Sbjct: 22289 catttatttgtgtttatgca 22270
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>dbj|AK138265.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230046P15 product:myosin IB, full insert
            sequence
          Length = 3047

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 468  aaaataagataaattaatct 487
            ||||||||||||||||||||
Sbjct: 2120 aaaataagataaattaatct 2101
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>gb|AC090531.18| Homo sapiens 12q BAC RP11-413B19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 204468

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 466  ttaaaataagataaattaat 485
            ||||||||||||||||||||
Sbjct: 6932 ttaaaataagataaattaat 6951
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>gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, complete sequence
          Length = 168539

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aggtgcatgtatgagacata 80
             ||||||||||||||||||||
Sbjct: 57113 aggtgcatgtatgagacata 57132
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>ref|NM_001020331.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC19D5.04),
            partial mRNA
          Length = 9684

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 444  cagaggcatttgtttcttct 463
            ||||||||||||||||||||
Sbjct: 3562 cagaggcatttgtttcttct 3543
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 551      tttatttgtgtttatgcaat 570
                ||||||||||||||||||||
Sbjct: 18158431 tttatttgtgtttatgcaat 18158412
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>gb|AC007711.9|AC007711 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone
              BACR02O09, complete sequence
          Length = 155751

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    tgtttgcttcctacaaaatt 241
              ||||||||||||||||||||
Sbjct: 144608 tgtttgcttcctacaaaatt 144627
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>gb|AC055769.4|AC055769 Arabidopsis thaliana chromosome 1 BAC T9G5 genomic sequence, complete
            sequence
          Length = 33913

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 466  ttaaaataagataaattaat 485
            ||||||||||||||||||||
Sbjct: 4327 ttaaaataagataaattaat 4346
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    aaaatgaaatctaaaacatc 171
              ||||||||||||||||||||
Sbjct: 708166 aaaatgaaatctaaaacatc 708147
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>gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thaliana chromosome 1, complete
              sequence
          Length = 127462

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    ttaaaataagataaattaat 485
              ||||||||||||||||||||
Sbjct: 127114 ttaaaataagataaattaat 127133
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>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  attaaaataagataaattaa 484
            ||||||||||||||||||||
Sbjct: 1401 attaaaataagataaattaa 1420
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>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence
          Length = 197868

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   tcatgattccatgggagtga 213
             ||||||||||||||||||||
Sbjct: 90848 tcatgattccatgggagtga 90867
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>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 559     tgtttatgcaattattaatt 578
               ||||||||||||||||||||
Sbjct: 1915909 tgtttatgcaattattaatt 1915890
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>dbj|AK057885.1| Homo sapiens cDNA FLJ25156 fis, clone CBR07981
          Length = 1059

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 466 ttaaaataagataaattaat 485
           ||||||||||||||||||||
Sbjct: 490 ttaaaataagataaattaat 509
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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    acaaaatgaaatctaaaaca 169
              ||||||||||||||||||||
Sbjct: 964822 acaaaatgaaatctaaaaca 964841
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>emb|AL954673.5| Zebrafish DNA sequence from clone BUSM1-122B7 in linkage group 20,
            complete sequence
          Length = 84303

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 468  aaaataagataaattaatct 487
            ||||||||||||||||||||
Sbjct: 7045 aaaataagataaattaatct 7026
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>gb|U75480.2|SMU75480 Streptococcus mutans putative HPr(ser) kinase (ptsK) and putative
            prolipoprotein diacylglycerol transferase (lgt) genes,
            complete cds
          Length = 4175

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  aaaatgaaatctaaaacatc 171
            ||||||||||||||||||||
Sbjct: 2266 aaaatgaaatctaaaacatc 2247
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>gb|AE003728.3| Drosophila melanogaster chromosome 3R, section 66 of 118 of the
             complete sequence
          Length = 232094

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   tgtttgcttcctacaaaatt 241
             ||||||||||||||||||||
Sbjct: 91355 tgtttgcttcctacaaaatt 91374
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>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence
          Length = 247228

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    cagaggcatttgtttcttct 463
              ||||||||||||||||||||
Sbjct: 155521 cagaggcatttgtttcttct 155540
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>gb|AC121944.4| Mus musculus BAC clone RP24-211H19 from chromosome 1, complete sequence
          Length = 154484

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    atgtaaaaaatgcatgcatg 136
              ||||||||||||||||||||
Sbjct: 148926 atgtaaaaaatgcatgcatg 148907
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>gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosome 1, complete sequence
          Length = 202877

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    atgtaaaaaatgcatgcatg 136
              ||||||||||||||||||||
Sbjct: 185596 atgtaaaaaatgcatgcatg 185577
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>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   tttatgcaattattaatttt 580
             ||||||||||||||||||||
Sbjct: 80281 tttatgcaattattaatttt 80262
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>dbj|AB051856.1| Drosophila melanogaster dHS6ST mRNA for heparan sulfate
            6-O-sulfotransferase, complete cds
          Length = 3097

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tgtttgcttcctacaaaatt 241
            ||||||||||||||||||||
Sbjct: 3016 tgtttgcttcctacaaaatt 2997


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,927,159
Number of Sequences: 3902068
Number of extensions: 5927159
Number of successful extensions: 129808
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129476
Number of HSP's gapped (non-prelim): 332
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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