Clone Name | rbasd1e17 |
---|---|
Clone Library Name | barley_pub |
>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase) Length = 496 Score = 129 bits (324), Expect = 8e-30 Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 4/125 (3%) Frame = -3 Query: 649 GWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPH---N 479 G CG + +T +R FAK+Q++YILGKNP KMSY+VGFG KYPK++HHRG+SIP + Sbjct: 368 GINCGSSHFTASQIRGFAKTQVEYILGKNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVH 427 Query: 478 GVKYGCKGGFK-WRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVA 302 K GC G + S NPN VGA+V GPD +D F D R++Y++ EPT NA VA Sbjct: 428 PAKVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDARSDYSHAEPTTYINAAFVA 487 Query: 301 ALISL 287 ++ +L Sbjct: 488 SISAL 492
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 Score = 125 bits (313), Expect = 2e-28 Identities = 66/136 (48%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = -3 Query: 682 YADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHH 503 YA+YL+++ CG T L AK Q+DYILG+NP KMSY+VGFG++YP+ VHH Sbjct: 354 YANYLNSSGGHA-SCGTTTVTAKNLISLAKKQVDYILGQNPAKMSYMVGFGERYPQHVHH 412 Query: 502 RGASIPHNGV---KYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEP 332 RG+S+P V C GF++ S NPNILVGA++ GPD D F D R NY +EP Sbjct: 413 RGSSLPSVQVHPNSIPCNAGFQYLYSSPPNPNILVGAILGGPDNRDSFSDDRNNYQQSEP 472 Query: 331 TLAANAGLVAALISLA 284 NA LV AL A Sbjct: 473 ATYINAPLVGALAFFA 488
>GUN2_PERAE (P23666) Endoglucanase 2 (EC 3.2.1.4) (Endo-1,4-beta-glucanase)| (Abscission cellulase 2) (Fragment) Length = 130 Score = 121 bits (303), Expect = 2e-27 Identities = 61/122 (50%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Frame = -3 Query: 640 CGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPH---NGVK 470 CG T L AK Q+DYILG+NP KMSY+VGFG++YP+ VHHRG+S+P + Sbjct: 3 CGSTTVTAKNLISLAKKQVDYILGENPAKMSYMVGFGERYPQHVHHRGSSLPSVHAHPNP 62 Query: 469 YGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALIS 290 C GF++ S NPNILVGA++ GPD D F D R NY +EP NA LV AL Sbjct: 63 IPCNAGFQYLYSSSPNPNILVGAILGGPDSRDSFSDDRNNYQQSEPATYINAPLVGALAF 122 Query: 289 LA 284 A Sbjct: 123 FA 124
>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC| 3.2.1.4) Length = 484 Score = 116 bits (291), Expect = 6e-26 Identities = 58/136 (42%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = -3 Query: 682 YADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHH 503 YA Y+ A + CG + + L +K Q+DYILG NP KMSY+VGF +PKR+HH Sbjct: 345 YAKYMK-ATKHTFNCGSSVIVPNALISLSKRQVDYILGDNPIKMSYMVGFSSNFPKRIHH 403 Query: 502 RGASIPHNGVK---YGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEP 332 R +S+P + ++ GC GGF+ ++ NPNIL GA+V GP+++DG+ D R +Y++ EP Sbjct: 404 RASSLPSHALRSQSLGCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEP 463 Query: 331 TLAANAGLVAALISLA 284 NA V L A Sbjct: 464 ATYINAAFVGPLAYFA 479
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 69.7 bits (169), Expect = 8e-12 Identities = 40/107 (37%), Positives = 53/107 (49%) Frame = -3 Query: 601 FAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKAN 422 F + Q+DY++G NP + S+VVG G YP HHR A H+ N Sbjct: 359 FTQKQVDYLIGNNPNQQSFVVGMGPNYPINPHHRAA---HHSTTNDINNPVN-------N 408 Query: 421 PNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLAD 281 +L GA+V GP +D + D RT+Y E NAG V AL SL + Sbjct: 409 LYLLKGALVGGPGSNDEYTDDRTDYISNEVATDYNAGFVGALASLVN 455
>GUNZ_CLOSR (P23659) Endoglucanase Z precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Thermoactive cellulase) (Avicelase I) Length = 986 Score = 67.0 bits (162), Expect = 5e-11 Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 3/112 (2%) Frame = -3 Query: 613 VLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRES 434 + FAK Q+DY LG + + SYVVGFG PKR HHR A H+ W +S Sbjct: 367 IYNDFAKQQIDYALGSSGR--SYVVGFGVNPPKRPHHRTA---HSS----------WADS 411 Query: 433 KKA---NPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 287 + ++L+GA+V GP K D + D NY E NAG V AL + Sbjct: 412 MSVPDYHRHVLIGALVGGPGKDDSYTDDINNYINNEVACDYNAGFVGALAKM 463
>GUNI_CLOTM (Q02934) Endoglucanase 1 precursor (EC 3.2.1.4) (Endoglucanase I)| (EGI) (Endo-1,4-beta-glucanase) (Cellulase I) Length = 879 Score = 65.9 bits (159), Expect = 1e-10 Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Frame = -3 Query: 604 KFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKA 425 +FA+SQ DY LG + S+VVGFG+ PKR HHR A +G W +S+ Sbjct: 418 EFARSQADYALGSTGR--SFVVGFGENPPKRPHHRTA--------HG-----SWADSQME 462 Query: 424 NP---NILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 287 P ++L GA+V GPD D + D +NY E NAG V L + Sbjct: 463 PPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKM 511
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) Length = 1742 Score = 63.5 bits (153), Expect = 6e-10 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 3/113 (2%) Frame = -3 Query: 616 DVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRE 437 + RKF +SQ+DY LG + S+VVGFG PKR HHR A H+ W + Sbjct: 362 ETYRKFGESQIDYALGSTGR--SFVVGFGTNPPKRPHHRTA---HSS----------WAD 406 Query: 436 SKKA---NPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 287 S+ + + L GA+V GP D + D +NY E NAG V AL + Sbjct: 407 SQSIPSYHRHTLYGALVGGPGSDDSYTDDISNYVNNEVACDYNAGFVGALAKM 459
>GUN4_THEFU (P26221) Endoglucanase E-4 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-4) (Cellulase E4) Length = 880 Score = 62.4 bits (150), Expect = 1e-09 Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 4/111 (3%) Frame = -3 Query: 601 FAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRE---SK 431 FA Q++Y LG NP+ SYVVGFG P+ HHR A H W + S Sbjct: 391 FAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA---HG----------SWTDSIASP 437 Query: 430 KANPNILVGAMVAGP-DKHDGFKDIRTNYNYTEPTLAANAGLVAALISLAD 281 N ++L GA+V GP +D + D R +Y E NAG +AL L + Sbjct: 438 AENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVE 488
>GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)| (Endo-1,4-beta-glucanase) (Cellulase F) Length = 739 Score = 62.0 bits (149), Expect = 2e-09 Identities = 41/109 (37%), Positives = 55/109 (50%) Frame = -3 Query: 613 VLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRES 434 V ++FAK Q+DY LG + S+VVGFGK P+ HHR A + + E Sbjct: 367 VYKEFAKKQVDYALGSTGR--SFVVGFGKNPPRNPHHRTAHSSWSALM---------TEP 415 Query: 433 KKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISL 287 + +ILVGA+V GPD D + D +Y E NAG V AL + Sbjct: 416 AECR-HILVGALVGGPDGSDSYVDRLDDYQCNEVANDYNAGFVGALAKM 463
>GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 1045 Score = 59.7 bits (143), Expect = 8e-09 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 9/124 (7%) Frame = -3 Query: 625 YTTDVLRK-----FAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGC 461 + TD RK F Q++Y LG NP+ SYVVGFG P HHR A H Sbjct: 366 WMTDATRKARYHDFGVRQINYALGDNPRSSSYVVGFGANPPTAPHHRTA---HG------ 416 Query: 460 KGGFKWRES---KKANPNILVGAMVAGP-DKHDGFKDIRTNYNYTEPTLAANAGLVAALI 293 W +S + ++L GA+V GP +D + D R +Y E NAG +AL Sbjct: 417 ----SWLDSITTPAQSRHVLYGALVGGPGSPNDAYTDSRQDYVANEVATDYNAGFTSALA 472 Query: 292 SLAD 281 L + Sbjct: 473 RLVE 476
>GUNG_CLOCE (P37700) Endoglucanase G precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase G) (Cellulase G) (EGCCG) Length = 725 Score = 57.0 bits (136), Expect = 5e-08 Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Frame = -3 Query: 640 CGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGC 461 C P+ V + F KSQ+DY LG + S+VVG+G P+ HHR A +G Sbjct: 368 CTPS--KVSVYKDFLKSQIDYALGSTGR--SFVVGYGVNPPQHPHHRTA--------HG- 414 Query: 460 KGGFKWRE---SKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALIS 290 W + S + + + GA+V GPD DG+ D NY E NAG AL Sbjct: 415 ----SWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAK 470 Query: 289 L 287 + Sbjct: 471 M 471
>GUN4_BACS5 (P28622) Endoglucanase 4 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase 4) (Cellulase 4) (EG-IV) Length = 636 Score = 53.1 bits (126), Expect = 8e-07 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = -3 Query: 601 FAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRE---SK 431 FA Q Y+LG NPQ SYVVGFGK P HHR A H W + Sbjct: 369 FAIRQTHYMLGDNPQNRSYVVGFGKNPPMHPHHRTA---HG----------SWSNQLTTP 415 Query: 430 KANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANA 314 ++ + L G +V GP++ D + D ++Y E NA Sbjct: 416 SSHRHTLYGPLVGGPNRQDQYTDDISDYVSNEVATDYNA 454
>GUNX_PRUPE (P38534) Endoglucanase CX (EC 3.2.1.4) (Endo-1,4-beta-glucanase)| (CX-cellulase) (Fragment) Length = 251 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/51 (50%), Positives = 31/51 (60%) Frame = -3 Query: 682 YADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFG 530 YA YL T CG + T + L AK Q+DYILG NP K+SY+VGFG Sbjct: 202 YAKYLRTNGGVAT-CGSSKVTAETLISEAKKQVDYILGNNPAKISYMVGFG 251
>GUNA_FIBSU (P23665) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 453 Score = 38.9 bits (89), Expect = 0.015 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = -3 Query: 628 FYTTDVLRKFAKSQLDYILGKNPQKMSYVVGF---GKKYPKRVHHRG 497 F T+ + + + Y+LG N K SYVVGF G P R HHRG Sbjct: 374 FNNTNEHMEMIEKNVSYLLGDNGSKKSYVVGFSKNGANAPSRPHHRG 420
>GUN1_STRRE (Q05156) Cellulase 1 precursor (EC 3.2.1.4) (Endoglucanase)| (Endo-1,4-beta-glucanase) (Avicelase) Length = 746 Score = 33.1 bits (74), Expect = 0.81 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -3 Query: 607 RKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHR 500 R A +DY+LG+N MSYV G+G+ H R Sbjct: 636 RDGALQGMDYVLGRNALNMSYVTGYGEVSSHNQHSR 671
>GUNC_BUTFI (P23658) Cellodextrinase (EC 3.2.1.-)| Length = 547 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -3 Query: 586 LDYILGKNPQKMSYVVGFGKKYPKRVHHRGASI 488 LDYILG N +SYV G G+K K H R ++ Sbjct: 448 LDYILGCNSMDISYVTGNGEKAFKNPHLRPTAV 480
>GUND_CLOTM (P04954) Endoglucanase D precursor (EC 3.2.1.4) (EGD)| (Endo-1,4-beta-glucanase) (Cellulase D) Length = 649 Score = 32.3 bits (72), Expect = 1.4 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = -3 Query: 598 AKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFK-WRESKKAN 422 A + ++ G+N SYV G G P H R + G G ++ W Sbjct: 486 ALDAISHVFGRNYYNRSYVTGLGINPPMNPHDR---------RSGADGIWEPW------- 529 Query: 421 PNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADIDT 272 P LVG GP + DI+ +Y E + NA L+ AL + ++ Sbjct: 530 PGYLVGGGWPGP---KDWVDIQDSYQTNEIAINWNAALIYALAGFVNYNS 576
>GLO3_YEAST (P38682) ADP-ribosylation factor GTPase-activating protein GLO3| Length = 493 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -1 Query: 525 STPSVFITEGHQSLITVSNMDAKEVLNGESLRKQTLISSSEQ 400 STP +T+ S++T S K VLN + +K +++SSS + Sbjct: 205 STPKTTVTKTRSSILTASRK--KPVLNSQDKKKHSILSSSRK 244
>SPT6H_CAEBR (Q93148) Suppressor of Ty 6 homolog (Abnormal embryogenesis protein| 5) Length = 1521 Score = 30.0 bits (66), Expect = 6.9 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = -1 Query: 198 RQLGNLEESDS*TFHKHQMEGATDGCLIYSKDHKQKADNISLQSFYF-CIGMTDHYKSXC 22 + + NL + + +HK + +G D L+Y D Q A+ ++ F I D Y Sbjct: 614 KPIRNLTDEEFLYYHKAKQDGLIDMVLMYESDEDQAANQFLVKKFLSDSIFRKDEYTDNV 673 Query: 21 QPW 13 + W Sbjct: 674 EQW 676
>COAT_POPMV (Q02106) Coat protein (Capsid protein) (CP)| Length = 321 Score = 29.6 bits (65), Expect = 9.0 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 478 GVKYGCKGGFKWRESKKAN 422 G K+GC+ G KWRESK N Sbjct: 302 GGKFGCRVGTKWRESKCDN 320
>REL_CHICK (P16236) C-Rel proto-oncogene protein (C-Rel protein) (p68)| Length = 598 Score = 29.6 bits (65), Expect = 9.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -1 Query: 249 TPSSQQFPQCSRHPHHRRQLG 187 T SSQ +P CS+ PH QLG Sbjct: 349 TSSSQMYPPCSQMPHQPAQLG 369 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,763,529 Number of Sequences: 219361 Number of extensions: 2111594 Number of successful extensions: 5610 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5594 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)