ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1e17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB040769.1| Hordeum vulgare mRNA for endo-1,4-beta-glucanase Cel1, complete cds Length = 2442 Score = 1122 bits (566), Expect = 0.0 Identities = 566/566 (100%) Strand = Plus / Minus Query: 119 aaacaaccatctgttgctccctccatttgatgcttatgaaatgttcaggaatctgattct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2112 aaacaaccatctgttgctccctccatttgatgcttatgaaatgttcaggaatctgattct 2053 Query: 179 tcaaggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctga 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2052 tcaaggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctga 1993 Query: 239 gaagatggtgttcttatcaattgaatatctgccagtatcgatgtcagctaaagaaatcaa 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1992 gaagatggtgttcttatcaattgaatatctgccagtatcgatgtcagctaaagaaatcaa 1933 Query: 299 tgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1932 tgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcg 1873 Query: 359 gatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacgaggatatt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 gatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacgaggatatt 1813 Query: 419 agggtttgctttcttagactctctccatttaaaacctcctttgcatccatatttgacacc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1812 agggtttgctttcttagactctctccatttaaaacctcctttgcatccatatttgacacc 1753 Query: 479 gttatgagggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaacc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1752 gttatgagggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaacc 1693 Query: 539 cacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgc 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 cacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgc 1633 Query: 599 aaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatc 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1632 aaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatc 1573 Query: 659 tgcagtgtccagataatcagcataca 684 |||||||||||||||||||||||||| Sbjct: 1572 tgcagtgtccagataatcagcataca 1547 Score = 337 bits (170), Expect = 3e-89 Identities = 177/178 (99%), Gaps = 1/178 (0%) Strand = Plus / Minus Query: 1 acaacttccagtccatggttgacagnatgatttataatgatccgtcataccgatacagaa 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2289 acaacttccagtccatggttgacag-atgatttataatgatccgtcataccgatacagaa 2231 Query: 61 gtagaaactctgtaagcttatgttgtctgctttctgtttatggtctttgctgtatatcaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2230 gtagaaactctgtaagcttatgttgtctgctttctgtttatggtctttgctgtatatcaa 2171 Query: 121 acaaccatctgttgctccctccatttgatgcttatgaaatgttcaggaatctgattct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2170 acaaccatctgttgctccctccatttgatgcttatgaaatgttcaggaatctgattct 2113
>gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mRNA, complete cds Length = 2196 Score = 1086 bits (548), Expect = 0.0 Identities = 655/686 (95%), Gaps = 6/686 (0%) Strand = Plus / Minus Query: 1 acaacttccagtccatggttgacagnatgatttataatgatccgtcataccgatacagaa 60 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 2042 acaacttccagtccatggttgacag-atgatttatactgatccgtcataccgatacagaa 1984 Query: 61 gtagaaactctgtaagcttatgttgtctgctttctgtttatggtctttgctgtatat--c 118 |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| | Sbjct: 1983 gtagaaactctgtaagcttatgttgtctgctttctgttcgtggccttcgctgtatatacc 1924 Query: 119 aaacaaccatctgttgctccctccatttgatgcttatgaaatgttcaggaatctgattct 178 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 1923 aaacaaccatctgttgctccctccatttgatgcttatgaaatgttcagggatctgactct 1864 Query: 179 tcaaggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctga 238 ||| |||||||||||||| | ||||| ||||||||||||||||||||||||||||||| Sbjct: 1863 tcatggtttccaagctga--ggagtggt-ggggtgtcgggaacattgggggaactgctga 1807 Query: 239 gaagatggtgttcttatcaattgaatatctgccagtatcgatgtcagctaaagaaatcaa 298 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1806 gaagatggtgttcttatcaattgaatatctgccggtatcgatgtcagctagagaaatcaa 1747 Query: 299 tgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcg 358 ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1746 tgctgcaaccaagccagcatttgctgcaagggtaggttctgtgtaattgtaatttgtgcg 1687 Query: 359 gatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacgaggatatt 418 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1686 gatatctttgaagccatcatgcttgtcagggccagcaaccattgctccgacgaggatatt 1627 Query: 419 agggtttgctttcttagactctctccatttaaaacctcctttgcatccatatttgacacc 478 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1626 agggtttgctttcttaaactctctccatttaaaacctcctttgcatccgtacttgacacc 1567 Query: 479 gttatgagggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaacc 538 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1566 gttatgagggattgatgcccctctgtgatgaacacgcttcgggtacttctttccaaaacc 1507 Query: 539 cacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgc 598 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1506 cacgacgtagctcatcttttgtgggttcttgcctaggatgtaatcaagctgtgactttgc 1447 Query: 599 aaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatc 658 |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1446 aaacttacggaggacatctgtggtatagaaattaggtctacaataccaccttggtgtatc 1387 Query: 659 tgcagtgtccagataatcagcataca 684 ||| |||||||||||||||||||||| Sbjct: 1386 tgcggtgtccagataatcagcataca 1361
>ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2313 Score = 432 bits (218), Expect = e-118 Identities = 344/386 (89%) Strand = Plus / Minus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1861 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 1802 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 1801 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 1742 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 1741 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 1682 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 1681 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 1622 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgt 590 ||||||||||| |||||||||||||| |||||||||| ||||| | ||||| |||||| Sbjct: 1621 ccaaaacccacaacgtagctcatcttcagtgggttcttacctaggacataatcgagctgt 1562 Query: 591 gactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccct 650 ||| ||||||| ||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1561 gaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaataccaccca 1502 Query: 651 ggtgtatctgcagtgtccagataatc 676 ||||||||||||| ||||| ||||| Sbjct: 1501 ggtgtatctgcagcatccaggtaatc 1476 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 2118 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 2059 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 2058 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 2001 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 2000 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 1941 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 1940 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 1893
>dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D09, full insert sequence Length = 1963 Score = 432 bits (218), Expect = e-118 Identities = 344/386 (89%) Strand = Plus / Minus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1537 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 1478 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 1477 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 1418 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 1417 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 1358 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 1357 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 1298 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgt 590 ||||||||||| |||||||||||||| |||||||||| ||||| | ||||| |||||| Sbjct: 1297 ccaaaacccacaacgtagctcatcttcagtgggttcttacctaggacataatcgagctgt 1238 Query: 591 gactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccct 650 ||| ||||||| ||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1237 gaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaataccaccca 1178 Query: 651 ggtgtatctgcagtgtccagataatc 676 ||||||||||||| ||||| ||||| Sbjct: 1177 ggtgtatctgcagcatccaggtaatc 1152 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 1794 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 1735 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 1734 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 1677 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 1676 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 1617 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 1616 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 1569
>dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M04, full insert sequence Length = 2397 Score = 432 bits (218), Expect = e-118 Identities = 344/386 (89%) Strand = Plus / Minus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1962 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 1903 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 1902 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 1843 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 1842 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 1783 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 1782 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 1723 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgt 590 ||||||||||| |||||||||||||| |||||||||| ||||| | ||||| |||||| Sbjct: 1722 ccaaaacccacaacgtagctcatcttcagtgggttcttacctaggacataatcgagctgt 1663 Query: 591 gactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccct 650 ||| ||||||| ||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1662 gaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaataccaccca 1603 Query: 651 ggtgtatctgcagtgtccagataatc 676 ||||||||||||| ||||| ||||| Sbjct: 1602 ggtgtatctgcagcatccaggtaatc 1577 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 2219 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 2160 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 2159 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 2102 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 2101 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 2042 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 2041 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 1994
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 341 bits (172), Expect = 2e-90 Identities = 256/284 (90%) Strand = Plus / Plus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 29889829 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 29889888 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 29889889 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 29889948 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 29889949 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 29890008 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 29890009 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 29890068 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctag 574 ||||||||||| |||||||||||||| |||||||||| ||||| Sbjct: 29890069 ccaaaacccacaacgtagctcatcttcagtgggttcttacctag 29890112 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 29889572 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 29889631 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 29889632 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 29889689 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 29889690 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 29889749 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 29889750 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 29889797 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 587 ctgtgactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaatacca 646 ||||||| ||||||| ||||||||||| ||||| || |||||| |||||||||||||||| Sbjct: 29890215 ctgtgaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaatacca 29890274 Query: 647 ccctggtgtatctgcagtgtccagataatc 676 ||| ||||||||||||| ||||| ||||| Sbjct: 29890275 cccaggtgtatctgcagcatccaggtaatc 29890304 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 384 tcaggcccagcaaccattgctccgacgaggatattagggtttgctttcttagactctctc 443 ||||| ||||| ||||| |||||||||| ||| |||||||||| |||||| | |||||| Sbjct: 12077650 tcagggccagctaccatcgctccgacgatgatgttagggtttggtttcttggtttctctc 12077709 Query: 444 catttaaaacctcctttgca 463 || || ||||||||||||| Sbjct: 12077710 cacttccaacctcctttgca 12077729
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 341 bits (172), Expect = 2e-90 Identities = 256/284 (90%) Strand = Plus / Minus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 120777 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 120718 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 120717 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 120658 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 120657 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 120598 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 120597 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 120538 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctag 574 ||||||||||| |||||||||||||| |||||||||| ||||| Sbjct: 120537 ccaaaacccacaacgtagctcatcttcagtgggttcttacctag 120494 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 121034 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 120975 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 120974 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 120917 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 120916 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 120857 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 120856 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 120809 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 587 ctgtgactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaatacca 646 ||||||| ||||||| ||||||||||| ||||| || |||||| |||||||||||||||| Sbjct: 120391 ctgtgaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaatacca 120332 Query: 647 ccctggtgtatctgcagtgtccagataatc 676 ||| ||||||||||||| ||||| ||||| Sbjct: 120331 cccaggtgtatctgcagcatccaggtaatc 120302
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 341 bits (172), Expect = 2e-90 Identities = 256/284 (90%) Strand = Plus / Plus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 55770 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 55829 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 55830 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 55889 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 55890 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 55949 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 55950 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 56009 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctag 574 ||||||||||| |||||||||||||| |||||||||| ||||| Sbjct: 56010 ccaaaacccacaacgtagctcatcttcagtgggttcttacctag 56053 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 55513 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 55572 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 55573 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 55630 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 55631 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 55690 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 55691 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 55738 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 587 ctgtgactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaatacca 646 ||||||| ||||||| ||||||||||| ||||| || |||||| |||||||||||||||| Sbjct: 56156 ctgtgaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaatacca 56215 Query: 647 ccctggtgtatctgcagtgtccagataatc 676 ||| ||||||||||||| ||||| ||||| Sbjct: 56216 cccaggtgtatctgcagcatccaggtaatc 56245
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 341 bits (172), Expect = 2e-90 Identities = 256/284 (90%) Strand = Plus / Plus Query: 291 gaaatcaatgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaa 350 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 29981251 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 29981310 Query: 351 tttgtgcggatatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacg 410 ||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||| | Sbjct: 29981311 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 29981370 Query: 411 aggatattagggtttgctttcttagactctctccatttaaaacctcctttgcatccatat 470 ||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||||| Sbjct: 29981371 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 29981430 Query: 471 ttgacaccgttatgagggattgatgcccctctgtgatgaacacgcttggggtacttcttt 530 |||||||| ||||||||||||||||| |||||||||||| | |||||||||||||| ||| Sbjct: 29981431 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 29981490 Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctag 574 ||||||||||| |||||||||||||| |||||||||| ||||| Sbjct: 29981491 ccaaaacccacaacgtagctcatcttcagtgggttcttacctag 29981534 Score = 168 bits (85), Expect = 2e-38 Identities = 194/228 (85%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 30 atttataatgatccgtcataccgatacagaag-tagaaactctgtaagcttatgttgtct 88 ||||||| |||| ||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 29980994 atttataccgatctgtcatactgatacagaaaatagaggctctgtaagcttatgttgtct 29981053 Query: 89 gctttctgtttatggtctttgctgtatatcaaacaaccatctgttgctccctccatttga 148 ||||||||| | || |||||||||| ||||||| ||||||| | ||||||| ||||| Sbjct: 29981054 gctttctgtatgtgtcctttgctgtac--caaacaaacatctgtcgttccctccgtttga 29981111 Query: 149 tgcttatgaaatgttcaggaatctgattcttcaaggtttccaagctgacggcggtggtgg 208 |||| | ||||| ||||| |||||| |||||| ||||||||||||||||| || ||||| Sbjct: 29981112 tgctcaagaaatattcagcgatctgactcttcatggtttccaagctgacggtggaggtgg 29981171 Query: 209 gggtgtcgggaacattgggggaactgctgagaagatggtgttcttatc 256 ||| || || ||||| || |||||||| |||||||||||||||||||| Sbjct: 29981172 gggagttggaaacatcggaggaactgcagagaagatggtgttcttatc 29981219 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 587 ctgtgactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaatacca 646 ||||||| ||||||| ||||||||||| ||||| || |||||| |||||||||||||||| Sbjct: 29981637 ctgtgaccttgcaaatttgcggaggacttctgtagtgtagaaagtaggtccacaatacca 29981696 Query: 647 ccctggtgtatctgcagtgtccagataatc 676 ||| ||||||||||||| ||||| ||||| Sbjct: 29981697 cccaggtgtatctgcagcatccaggtaatc 29981726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 384 tcaggcccagcaaccattgctccgacgaggatattagggtttgctttcttagactctctc 443 ||||| ||||| ||||| |||||||||| ||| |||||||||| |||||| | |||||| Sbjct: 12074413 tcagggccagctaccatcgctccgacgatgatgttagggtttggtttcttggtttctctc 12074472 Query: 444 catttaaaacctcctttgca 463 || || ||||||||||||| Sbjct: 12074473 cacttccaacctcctttgca 12074492
>gb|BT017857.1| Zea mays clone EL01N0511D04.c mRNA sequence Length = 894 Score = 270 bits (136), Expect = 6e-69 Identities = 307/364 (84%) Strand = Plus / Minus Query: 300 gctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcgg 359 ||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 525 gctgcaaccagaccagcattcgctgcgagagtaggctccgtgtagttgtagttcgtgcgg 466 Query: 360 atatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacgaggatatta 419 | ||||||| ||||||| || |||| || ||||| |||||||||||||| ||||| ||| Sbjct: 465 acatctttgtagccatcgcgcctgtcggggccagccaccattgctccgacaaggatgtta 406 Query: 420 gggtttgctttcttagactctctccatttaaaacctcctttgcatccatatttgacaccg 479 |||||||| ||||| | || ||||| || ||||||||||||| ||||| ||||| ||| Sbjct: 405 gggtttgccttctttgtgtccctccacttgtaacctcctttgcacccatacttgacgccg 346 Query: 480 ttatgagggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaaccc 539 || ||||| || || || |||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 345 ttgtgaggtatcgacgcgcctctgtgatgagggcgcttcgggtacttgtttccgaaaccc 286 Query: 540 acgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgca 599 || |||||||||||||| |||||||||||| || ||||| || ||||||||| | ||| Sbjct: 285 acaacgtagctcatcttcaatgggttcttgccaaggatgtagtcgagctgtgacctggca 226 Query: 600 aacttgcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatct 659 |||||||||||||| |||||||| ||||| |||||||| || |||||||| || || ||| Sbjct: 225 aacttgcggaggacttctgtggtgtagaagttaggtccgcagtaccacccaggcgtgtct 166 Query: 660 gcag 663 |||| Sbjct: 165 gcag 162 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaag 242 |||||||| ||||| ||||| || |||||||| |||||||| || |||| || |||||| Sbjct: 642 ggtttccatgctgatggcggcggcgggggtgttgggaacatcggaggaatcgcagagaag 583 Query: 243 atggtgttcttatc 256 |||||||||||||| Sbjct: 582 atggtgttcttatc 569 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 54 tacagaagtagaaactctgtaagcttatgttgtctgctttc 94 ||||||| ||||| | || ||||||||||||||| |||||| Sbjct: 777 tacagaaatagaagccctataagcttatgttgtcagctttc 737
>gb|BT023982.1| Zea mays clone EL01N0414A03 mRNA sequence Length = 1870 Score = 270 bits (136), Expect = 6e-69 Identities = 307/364 (84%) Strand = Plus / Minus Query: 300 gctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcgg 359 ||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 1436 gctgcaaccagaccagcattcgctgcgagagtaggctccgtgtagttgtagttcgtgcgg 1377 Query: 360 atatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacgaggatatta 419 | ||||||| ||||||| || |||| || ||||| |||||||||||||| ||||| ||| Sbjct: 1376 acatctttgtagccatcgcgcctgtcggggccagccaccattgctccgacaaggatgtta 1317 Query: 420 gggtttgctttcttagactctctccatttaaaacctcctttgcatccatatttgacaccg 479 |||||||| ||||| | || ||||| || ||||||||||||| ||||| ||||| ||| Sbjct: 1316 gggtttgccttctttgtgtccctccacttgtaacctcctttgcacccatacttgacgccg 1257 Query: 480 ttatgagggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaaccc 539 || ||||| || || || |||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 1256 ttgtgaggtatcgacgcgcctctgtgatgagggcgcttcgggtacttgtttccgaaaccc 1197 Query: 540 acgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgca 599 || |||||||||||||| |||||||||||| || ||||| || ||||||||| | ||| Sbjct: 1196 acaacgtagctcatcttcaatgggttcttgccaaggatgtagtcgagctgtgacctggca 1137 Query: 600 aacttgcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatct 659 |||||||||||||| |||||||| ||||| |||||||| || |||||||| || || ||| Sbjct: 1136 aacttgcggaggacttctgtggtgtagaagttaggtccgcagtaccacccaggcgtgtct 1077 Query: 660 gcag 663 |||| Sbjct: 1076 gcag 1073 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaag 242 |||||||| ||||| ||||| || |||||||| |||||||| || |||| || |||||| Sbjct: 1553 ggtttccatgctgatggcggcggcgggggtgttgggaacatcggaggaatcgcagagaag 1494 Query: 243 atggtgttcttatc 256 |||||||||||||| Sbjct: 1493 atggtgttcttatc 1480
>gb|AY104195.1| Zea mays PCO094435 mRNA sequence Length = 2019 Score = 262 bits (132), Expect = 1e-66 Identities = 306/364 (84%) Strand = Plus / Minus Query: 300 gctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcgg 359 ||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 1502 gctgcaaccagaccagcattcgctgcgagagtaggctccgtgtagttgtagttcgtgcgg 1443 Query: 360 atatctttgaagccatcatgcttgtcaggcccagcaaccattgctccgacgaggatatta 419 | ||||||| ||||||| || |||| || ||||| |||||||||||||| ||||| ||| Sbjct: 1442 acatctttgtagccatcgcgcctgtcggggccagccaccattgctccgacaaggatgtta 1383 Query: 420 gggtttgctttcttagactctctccatttaaaacctcctttgcatccatatttgacaccg 479 |||||||| ||||| | || ||||| || ||||||||||||| ||||| ||||| ||| Sbjct: 1382 gggtttgccttctttgtgtccctccacttgtaacctcctttgcacccatacttgacgccg 1323 Query: 480 ttatgagggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaaccc 539 || ||||| || || || |||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 1322 ttgtgaggtatcgacgcgcctctgtgatgagggcgcttcgggtacttgtttccgaaaccc 1263 Query: 540 acgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgca 599 || |||||||||||||| ||||||||| || || ||||| || ||||||||| | ||| Sbjct: 1262 acaacgtagctcatcttcaatgggttctttccaaggatgtagtcgagctgtgacctggca 1203 Query: 600 aacttgcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatct 659 |||||||||||||| |||||||| ||||| |||||||| || |||||||| || || ||| Sbjct: 1202 aacttgcggaggacttctgtggtgtagaagttaggtccgcagtaccacccaggcgtgtct 1143 Query: 660 gcag 663 |||| Sbjct: 1142 gcag 1139 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaag 242 |||||||| ||||| ||||| || |||||||| |||||||| || |||| || |||||| Sbjct: 1619 ggtttccatgctgatggcggcggcgggggtgttgggaacatcggaggaatcgcagagaag 1560 Query: 243 atggtgttcttatc 256 |||||||||||||| Sbjct: 1559 atggtgttcttatc 1546
>gb|DQ382354.1| Glycine max clone pSC12a endo-1,4-beta-glucancase precursor (Cel12) mRNA, partial cds Length = 1841 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 315 gcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaagcca 374 |||||| | ||||| || ||||||||||||||||| ||||| || | ||| | ||||||| Sbjct: 1757 gcatttccagcaagtgttggctctgtgtaattgtagtttgtacgaacatcatggaagcca 1698 Query: 375 tcatgcttgtcaggcccagcaaccat 400 |||||||||||||| || |||||||| Sbjct: 1697 tcatgcttgtcaggaccggcaaccat 1672 Score = 61.9 bits (31), Expect = 3e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 531 ccaaaacccacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgt 590 |||||||| ||||| || ||||| || |||||| || || || |||||||||| ||| Sbjct: 1541 ccaaaacctacgacataactcattttccttgggttatttccaaggatgtaatcaatctgg 1482 Query: 591 gactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaataccaccct 650 ||||| ||||| | ||||| || || || | | |||||||||||||||||||||| || Sbjct: 1481 gacttggcaaagctacggagcacgtcggttgaaaagaaattaggtccacaataccatcca 1422 Query: 651 ggtgtatctgcagtgtccagataatca 677 |||||||| |||| || ||||||||| Sbjct: 1421 ggtgtatcagcagcatcaagataatca 1395
>ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G24260 mRNA, complete cds Length = 1863 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 312 ccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaag 371 ||||||||| | || ||||| |||||||| || ||||||||||| || || || | ||| Sbjct: 1733 ccagcatttcccgctagagtcggctctgtatagttgtaatttgttcgtatgtcgtggaat 1674 Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 || ||||||||||| || ||||||||||||||||| Sbjct: 1673 ccgtcatgcttgtctggtccagcaaccattgctcc 1639
>gb|BT013492.1| Lycopersicon esculentum clone 132176F, mRNA sequence Length = 2314 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 312 ccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaag 371 ||||||||| | |||||||||||||| || ||||||||||| | |||| ||| ||| Sbjct: 1885 ccagcatttccagcaagagtaggctccgtataattgtaattagaacggacatcacggaaa 1826 Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 |||||||||||||| || ||||||||||| ||||| Sbjct: 1825 ccatcatgcttgtctggtccagcaaccatggctcc 1791
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 312 ccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaag 371 ||||||||| | || ||||| |||||||| || ||||||||||| || || || | ||| Sbjct: 29052 ccagcatttcccgctagagtcggctctgtatagttgtaatttgttcgtatgtcgtggaat 29111 Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 || ||||||||||| || ||||||||||||||||| Sbjct: 29112 ccgtcatgcttgtctggtccagcaaccattgctcc 29146
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 312 ccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaag 371 ||||||||| | || ||||| |||||||| || ||||||||||| || || || | ||| Sbjct: 45709 ccagcatttcccgctagagtcggctctgtatagttgtaatttgttcgtatgtcgtggaat 45768 Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 || ||||||||||| || ||||||||||||||||| Sbjct: 45769 ccgtcatgcttgtctggtccagcaaccattgctcc 45803
>gb|U78526.1|LEU78526 Lycopersicon esculentum endo-1,4-beta-glucanase (Cel3) mRNA, complete cds Length = 2286 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 312 ccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaag 371 ||||||||| | |||||||||||||| || ||||||||||| | |||| ||| ||| Sbjct: 1875 ccagcatttccagcaagagtaggctccgtataattgtaattagaacggacatcacggaaa 1816 Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 |||||||||||||| || ||||||||||| ||||| Sbjct: 1815 ccatcatgcttgtctggtccagcaaccatggctcc 1781
>emb|AJ621355.1| Pisum sativum partial mRNA for endo-1,4-beta-D-glucanase KORRIGAN (kor-1 gene) Length = 688 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 528 tttccaaaacccacgacgtagctcatcttttgtgggttcttgcctagaatgtaatcaagc 587 ||||||||||| || | |||||||| || |||| ||||| || || |||||||||| | Sbjct: 369 tttccaaaacctacaatatagctcattttccgtggattcttcccaaggatgtaatcaatc 310 Query: 588 tgtgactttgcaaacttgcggaggacatctgtggtatagaaattaggtccacaataccac 647 |||| | | ||||||| |||||| ||| || | ||||||||||||||||||||||||| Sbjct: 309 tgtgtcctggcaaactcgcggagtttatcggttgaatagaaattaggtccacaataccac 250 Query: 648 cc 649 || Sbjct: 249 cc 248 Score = 42.1 bits (21), Expect = 2.4 Identities = 72/89 (80%) Strand = Plus / Minus Query: 312 ccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaag 371 ||||||||| | ||||| || ||||||||||| ||||| |||| || | ||| | ||| Sbjct: 585 ccagcatttccagcaagtgttggctctgtgtagttgtagtttgatcgaacatcgtggaaa 526 Query: 372 ccatcatgcttgtcaggcccagcaaccat 400 || || ||| ||||||| ||||||||||| Sbjct: 525 ccgtcgtgcctgtcaggaccagcaaccat 497
>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds Length = 1860 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaag 242 |||||||||| || || |||||||| || || || ||||||||||||||||| ||||| Sbjct: 1856 ggtttccaaggtgctggtggtggtggaggagttggaaacattgggggaactgcagagaat 1797 Query: 243 atggtgttcttatcaat 259 ||||||||||| ||||| Sbjct: 1796 atggtgttcttgtcaat 1780 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 333 ggctctgtgtaattgtaatttgtgcggatatctttgaagccatcatgcttgtcaggccca 392 |||||||| ||||| || || ||||| | ||| | ||| ||||||||| ||||||| ||| Sbjct: 1712 ggctctgtataattatagttggtgcgaacatcatggaaaccatcatgcctgtcagggcca 1653 Query: 393 gcaaccattgctcc 406 |||||||| ||||| Sbjct: 1652 gcaaccatggctcc 1639
>gb|AY253447.1| Gossypium hirsutum endo-1,4-beta-glucanase mRNA, complete cds Length = 2031 Score = 65.9 bits (33), Expect = 2e-07 Identities = 153/193 (79%) Strand = Plus / Minus Query: 485 agggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaacccacgac 544 |||||| ||||||||||| || |||||| |||| || || | || ||||| ||||| || Sbjct: 1606 agggatagatgcccctctatggtgaacatgctttggataatggttaccaaagcccacaac 1547 Query: 545 gtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgcaaactt 604 |||||||| ||| | || || ||||| || || ||||||| ||| | || ||||| | Sbjct: 1546 atagctcatttttcgaggatttttgccaaggatataatcaatctgggttttggcaaattc 1487 Query: 605 gcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatctgcagt 664 || |||||||| || | ||||||||| || ||||||||||| || |||||||| ||||| Sbjct: 1486 acgcaggacatcagttgaatagaaattgggaccacaataccatccaggtgtatcagcagt 1427 Query: 665 gtccagataatca 677 || ||||||||| Sbjct: 1426 atcaagataatca 1414 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1719 ccatcatgcttgtcaggtccagctaccatggctcc 1685
>emb|AJ242807.1|BNA242807 Brassica napus Cel16 gene for endo-1,4-beta-D-glucanase (cellulase) Length = 5454 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 299 tgctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcg 358 |||||| |||||||||||||| |||||||||| || || ||||| ||||| || || || Sbjct: 4332 tgctgcgaccaggccagcattccctgcaagagtcggttcagtgtagttgtagttggtccg 4273 Query: 359 gatatctttgaagccatcatgcttgtcaggcccagcaaccattgctcc 406 || ||| ||| ||||| |||||||||| ||||||||||| ||||| Sbjct: 4272 gacatcgcggaacccatcgcgcttgtcaggaccagcaaccatggctcc 4225 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcag 663 |||||||||||||||||| ||||| || || ||||| |||| Sbjct: 3734 atagaaattaggtccacagtaccatccaggagtatcagcag 3694
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 384 tcaggcccagcaaccattgctccgacgaggatattagggtttgctttcttagactctctc 443 ||||| ||||| ||||| |||||||||| ||| |||||||||| |||||| | |||||| Sbjct: 98230 tcagggccagctaccatcgctccgacgatgatgttagggtttggtttcttggtttctctc 98289 Query: 444 catttaaaacctcctttgca 463 || || ||||||||||||| Sbjct: 98290 cacttccaacctcctttgca 98309
>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full insert sequence Length = 2189 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 384 tcaggcccagcaaccattgctccgacgaggatattagggtttgctttcttagactctctc 443 ||||| ||||| ||||| |||||||||| ||| |||||||||| |||||| | |||||| Sbjct: 1772 tcagggccagctaccatcgctccgacgatgatgttagggtttggtttcttggtttctctc 1713 Query: 444 catttaaaacctcctttgca 463 || || ||||||||||||| Sbjct: 1712 cacttccaacctcctttgca 1693
>dbj|AB084463.1| Pyrus communis PC-EG1 mRNA for endo-1,4-beta-D-glucanase, encodes membrane-spanning domain, complete cds Length = 2242 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 315 gcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggatatctttgaagcca 374 |||||| |||||||||| ||||||||||| |||||||| | || | ||| ||| ||| Sbjct: 1810 gcatttcctgcaagagtcggctctgtgtagttgtaattagaacgaacatcacggaaacca 1751 Query: 375 tcatgcttgtcaggcccagcaaccat 400 ||||| |||||||| ||||||||||| Sbjct: 1750 tcatgtttgtcaggaccagcaaccat 1725 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 624 tagaaattaggtccacaataccaccctggtgtatctgcag 663 ||||| || ||||||||||||||||| |||||||| |||| Sbjct: 1501 tagaagttgggtccacaataccacccaggtgtatcagcag 1462 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaa 241 |||||||| | || ||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 1936 ggtttccagggtgccggaggtggtggtggagtggggaacattgggggaaccgcagagaa 1878
>gb|BT013449.1| Lycopersicon esculentum clone 132105F, mRNA sequence Length = 2203 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 300 gctgcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcgg 359 |||||||||| ||||||||| | ||||| || ||||| || ||||||||||| || || Sbjct: 1804 gctgcaaccaacccagcatttccggcaagtgttggctcggtataattgtaattagtacga 1745 Query: 360 atatctttgaagccatcatgcttgtcaggcccagcaaccat 400 | ||| | ||| ||||||| |||||| || ||||||||||| Sbjct: 1744 acatcatggaaaccatcattcttgtctggtccagcaaccat 1704 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 609 aggacatctgtggtatagaaattaggtccacaatacca 646 |||||||| |||| ||||||||||||||||||||||| Sbjct: 1495 aggacatcggtggagtagaaattaggtccacaatacca 1458 Score = 44.1 bits (22), Expect = 0.60 Identities = 64/78 (82%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaag 242 ||||||||||| | ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 1915 ggtttccaagcagctggcggaggtggtggagtagggaacatgggtggtactgcagagaat 1856 Query: 243 atggtgttcttatcaatt 260 || |||||||| |||||| Sbjct: 1855 atcgtgttcttgtcaatt 1838
>gb|AY574906.1| Gossypium hirsutum membrane-anchored endo-1,4-beta-glucanase (CEL) mRNA, complete cds Length = 2293 Score = 58.0 bits (29), Expect = 4e-05 Identities = 152/193 (78%) Strand = Plus / Minus Query: 485 agggattgatgcccctctgtgatgaacacgcttggggtacttctttccaaaacccacgac 544 |||||| ||||||||||| || |||||| |||| || || | || ||||| ||||| || Sbjct: 1620 agggatagatgcccctctatggtgaacatgctttggataatggttaccaaagcccacaac 1561 Query: 545 gtagctcatcttttgtgggttcttgcctagaatgtaatcaagctgtgactttgcaaactt 604 |||||||| ||| | || || ||||| || || ||||||| ||| | || ||||| | Sbjct: 1560 atagctcatttttcgaggatttttgccaaggatataatcaatctgggttttggcaaattc 1501 Query: 605 gcggaggacatctgtggtatagaaattaggtccacaataccaccctggtgtatctgcagt 664 || |||||||| || | ||||||||| || ||||||||||| || |||||||| |||| Sbjct: 1500 acgcaggacatcagttgaatagaaattgggaccacaataccatccaggtgtatcagcagc 1441 Query: 665 gtccagataatca 677 || ||||||||| Sbjct: 1440 atcaagataatca 1428
>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds Length = 2562 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 183 ggtttccaagctgacggcggtggtgggggtgtcgggaacattgggggaactgctgagaag 242 |||||||||| || || |||||||| || || || |||||||||||||| || ||||| Sbjct: 2118 ggtttccaaggtgctggtggtggtggaggagttggaaacattgggggaaccgcagagaat 2059 Query: 243 atggtgttcttatcaat 259 ||||||||||| ||||| Sbjct: 2058 atggtgttcttgtcaat 2042 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 333 ggctctgtgtaattgtaatttgtgcggatatctttgaagccatcatgcttgtcaggccca 392 |||||||| ||||| || || ||||| | ||| | ||| ||||||||| ||||||| ||| Sbjct: 1974 ggctctgtataattatagttggtgcgaacatcatggaaaccatcatgcctgtcagggcca 1915 Query: 393 gcaaccattgctcc 406 |||||||| ||||| Sbjct: 1914 gcaaccatggctcc 1901
>ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydrolase, hydrolyzing O-glycosyl compounds AT5G49720 (KOR1) mRNA, complete cds Length = 2360 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1542 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1488 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 1786 gcttgtcaggaccagcaaccatggctcc 1759
>dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase homolog OR16pep precursor, partial cds, clone: RAFL24-21-F09 Length = 1102 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 328 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 274 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 572 gcttgtcaggaccagcaaccatggctcc 545
>gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, complete cds Length = 2307 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1542 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1488 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 1786 gcttgtcaggaccagcaaccatggctcc 1759
>gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, complete sequence Length = 2303 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1542 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1488 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 1786 gcttgtcaggaccagcaaccatggctcc 1759
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5 Length = 71807 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 35384 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 35438 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 34970 gcttgtcaggaccagcaaccatggctcc 34997
>gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, complete cds Length = 1866 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1422 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1368 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 1666 gcttgtcaggaccagcaaccatggctcc 1639
>gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pep) mRNA, complete cds Length = 2257 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1492 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1438 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 1736 gcttgtcaggaccagcaaccatggctcc 1709
>gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D-glucanase KORRIGAN (KOR) gene, KOR-1 allele, complete cds Length = 2873 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1938 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1884 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 2352 gcttgtcaggaccagcaaccatggctcc 2325
>gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC) mRNA, complete cds Length = 2179 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 1485 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 1431 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 1729 gcttgtcaggaccagcaaccatggctcc 1702
>gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC) gene, complete cds Length = 4033 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 623 atagaaattaggtccacaataccaccctggtgtatctgcagtgtccagataatca 677 |||||||||||||||||| ||||| || || ||||| |||| |||||||||||| Sbjct: 2777 atagaaattaggtccacagtaccatccaggagtatcagcagcatccagataatca 2723 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gcttgtcaggcccagcaaccattgctcc 406 |||||||||| ||||||||||| ||||| Sbjct: 3191 gcttgtcaggaccagcaaccatggctcc 3164
>gb|AF511408.1| Gossypium hirsutum endo-1,4-beta-glucanase mRNA, complete cds Length = 2282 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/69 (84%) Strand = Plus / Minus Query: 609 aggacatctgtggtatagaaattaggtccacaataccaccctggtgtatctgcagtgtcc 668 |||||||| || | ||||||||| || ||||||||||| || |||||||| |||| || Sbjct: 1515 aggacatcagttgaatagaaattgggaccacaataccatccaggtgtatcagcagcatca 1456 Query: 669 agataatca 677 ||||||||| Sbjct: 1455 agataatca 1447 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 372 ccatcatgcttgtcaggcccagcaaccattgctcc 406 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1752 ccatcatgcttgtcaggtccagctaccatggctcc 1718
>gb|DQ100342.1| Eucalyptus globulus endo-1,4-beta-glucanase (EG2) mRNA, partial cds Length = 1756 Score = 48.1 bits (24), Expect = 0.038 Identities = 84/104 (80%) Strand = Plus / Minus Query: 303 gcaaccaggccagcatttgctgcaagagtaggctctgtgtaattgtaatttgtgcggata 362 |||||||| || ||||| |||| ||||| || |||||||| ||||| || || |||| Sbjct: 1253 gcaaccagtcctgcattccctgcgagagtgggttctgtgtagttgtagttagtacggacg 1194 Query: 363 tctttgaagccatcatgcttgtcaggcccagcaaccattgctcc 406 || | |||||| |||||||| || || || |||||||||||||| Sbjct: 1193 tcatggaagccgtcatgcttatcgggacctgcaaccattgctcc 1150
>gb|DQ382355.1| Glycine max clone pSC12b endo-1,4-beta-glucancase precursor (Cel12) mRNA, partial cds Length = 517 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 201 ggtggtgggggtgtcgggaacattgggggaactgctgagaagatggt 247 |||||||| ||||| || |||||||||||||| || ||||| ||||| Sbjct: 121 ggtggtggcggtgtaggaaacattgggggaacagcagagaaaatggt 75
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 192 gctgacggcggtggtgggggtgtcggg 218 ||||||||||||||||| ||||||||| Sbjct: 272225 gctgacggcggtggtggaggtgtcggg 272199
>gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, complete sequence Length = 177781 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 ttgcctagaatgtaatcaagct 588 |||||||||||||||||||||| Sbjct: 3150 ttgcctagaatgtaatcaagct 3171
>ref|NM_179018.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G09740 mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 573 agaatgtaatcaagctgtgactttgcaaa 601 ||||||||||||| ||||||||| ||||| Sbjct: 1127 agaatgtaatcaacctgtgacttggcaaa 1099
>gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete sequence Length = 99046 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 aatctgattcttcaaggtttccaag 192 ||||| ||||||||||||||||||| Sbjct: 92414 aatctaattcttcaaggtttccaag 92438 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 aatctgattcttcaaggtttccaag 192 ||||| ||||||||||||||||||| Sbjct: 79658 aatctaattcttcaaggtttccaag 79682
>gb|AC069359.5| Homo sapiens chromosome 8, clone CTD-2003P13, complete sequence Length = 86991 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 aggacatctgtggtatagaaa 629 ||||||||||||||||||||| Sbjct: 60157 aggacatctgtggtatagaaa 60177
>ref|NM_129561.2| Arabidopsis thaliana NRPD1b; DNA binding / DNA-directed RNA polymerase AT2G40030 (NRPD1b) mRNA, complete cds Length = 6106 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctgagaagatggtgttcttatcaa 258 ||||||||||||||| |||||||| Sbjct: 5413 ctgagaagatggtgtgcttatcaa 5390
>gb|DQ353365.1| Heteroponera microps voucher RA0384 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1035 Score = 40.1 bits (20), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 20 tgacagnatgatttataatgatc 42 |||||| |||||||||||||||| Sbjct: 66 tgacagaatgatttataatgatc 88
>gb|DQ020656.1| Arabidopsis thaliana RNA polymerase IV largest subunit (RPE1) mRNA, complete cds Length = 6348 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctgagaagatggtgttcttatcaa 258 ||||||||||||||| |||||||| Sbjct: 5653 ctgagaagatggtgtgcttatcaa 5630
>gb|AY826516.1| Arabidopsis thaliana DNA-directed RNA polymerase alpha subunit (NRPD1b) mRNA, complete cds Length = 5931 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctgagaagatggtgttcttatcaa 258 ||||||||||||||| |||||||| Sbjct: 5413 ctgagaagatggtgtgcttatcaa 5390
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tctgctttctgtttatggtc 105 |||||||||||||||||||| Sbjct: 120413 tctgctttctgtttatggtc 120394
>emb|Y15839.1|CHY15839 Cochliobolus heterostrophus pkc1, fat1 genes Length = 9313 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 caaacaaccatctgttgctccctc 141 ||||||||||||| |||||||||| Sbjct: 6037 caaacaaccatcttttgctccctc 6014
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tttgcatccatatttgacac 477 |||||||||||||||||||| Sbjct: 8534 tttgcatccatatttgacac 8515
>emb|CR932397.9| Zebrafish DNA sequence from clone CH211-123E19 in linkage group 13, complete sequence Length = 173825 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctctgtgtaattgtaatttg 354 |||||||||||||||||||| Sbjct: 70477 ctctgtgtaattgtaatttg 70496
>gb|AY927744.1| Arabidopsis thaliana DNA-dependent RNA polymerase large subunit (NRPD1b/DRD3) mRNA, complete cds Length = 5931 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctgagaagatggtgttcttatcaa 258 ||||||||||||||| |||||||| Sbjct: 5413 ctgagaagatggtgtgcttatcaa 5390
>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 gtaatcaagctgtgactttg 597 |||||||||||||||||||| Sbjct: 24249 gtaatcaagctgtgactttg 24268
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctgagaagatggtgttcttatcaa 258 ||||||||||||||| |||||||| Sbjct: 91549 ctgagaagatggtgtgcttatcaa 91526
>dbj|AK081831.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130080K17 product:hypothetical protein, full insert sequence Length = 1228 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 550 tcatcttttgtgggttcttgccta 573 ||||||||| |||||||||||||| Sbjct: 785 tcatcttttctgggttcttgccta 808
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tttgcatccatatttgacac 477 |||||||||||||||||||| Sbjct: 33236273 tttgcatccatatttgacac 33236254
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 tcatcttttgtgggttcttgccta 573 ||||||||| |||||||||||||| Sbjct: 173322 tcatcttttctgggttcttgccta 173299
>emb|AL929184.7| Zebrafish DNA sequence from clone CH211-125N20, complete sequence Length = 168257 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tgttgtctgctttctgttta 100 |||||||||||||||||||| Sbjct: 19297 tgttgtctgctttctgttta 19278
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 ctaaagaaatcaatgctgcaacca 309 ||||||||||||||| |||||||| Sbjct: 1606577 ctaaagaaatcaatgatgcaacca 1606554
>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence Length = 176876 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 aagctgtgactttgcaaact 603 |||||||||||||||||||| Sbjct: 59370 aagctgtgactttgcaaact 59351
>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16, complete sequence Length = 195410 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tgttgtctgctttctgttta 100 |||||||||||||||||||| Sbjct: 113755 tgttgtctgctttctgttta 113774
>gb|DQ119551.1| Opisthorchis viverrini NADH dehydrogenase subunit 1 gene, partial cds; tRNA-Asn, tRNA-Pro, tRNA-Ile, and tRNA-Lys genes, complete sequence; and NADH dehydrogenase subunit 3 gene, complete cds; mitochondrial Length = 1357 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tgtgtaattgtaatttgtgc 357 |||||||||||||||||||| Sbjct: 246 tgtgtaattgtaatttgtgc 265
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tctgctttctgtttatggtc 105 |||||||||||||||||||| Sbjct: 72639 tctgctttctgtttatggtc 72620
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agcttatgttgtctgctttc 94 |||||||||||||||||||| Sbjct: 4122854 agcttatgttgtctgctttc 4122835
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tttgcatccatatttgacac 477 |||||||||||||||||||| Sbjct: 118922 tttgcatccatatttgacac 118903
>gb|L27342.1|CHKPP40X Chicken I kappa B-alpha gene, partial cds Length = 1605 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ccaggccagcatttgctgcaagag 330 ||||||||||| |||||||||||| Sbjct: 292 ccaggccagcaattgctgcaagag 315
>emb|AL645583.12| Mouse DNA sequence from clone RP23-12N20 on chromosome 11, complete sequence Length = 67643 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tgttgtctgctttctgttta 100 |||||||||||||||||||| Sbjct: 23450 tgttgtctgctttctgttta 23469
>gb|AC124634.24| Mus musculus chromosome 18, clone RP23-450K16, complete sequence Length = 178989 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggtggtgggggtgtcgggaa 220 |||||||||||||||||||| Sbjct: 100812 ggtggtgggggtgtcgggaa 100793 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,566,919 Number of Sequences: 3902068 Number of extensions: 6566919 Number of successful extensions: 119997 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119529 Number of HSP's gapped (non-prelim): 452 length of query: 684 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 661 effective length of database: 17,143,297,704 effective search space: 11331719782344 effective search space used: 11331719782344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
