>POLG_BCMVN (Q65399) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral ge
          Length = 3066

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -1

Query: 474  AWLSK*MPLWRLVSLRRVTSEFCRRRVCSGRALTGRQ-VSG*TDSLYNKMQNA-LVIAIF 301
            +WL K    W+L    +VT E   ++   GR  + R+ VS    +    + NA + I+  
Sbjct: 941  SWLEKSSVTWQLKKFSKVTEEHLTKKAAEGRKESSRKFVSACFMNAQTHLGNARITISNK 1000

Query: 300  GCEITTLYLERIIE 259
              E+T L + RI+E
Sbjct: 1001 VNEVTNLGVRRIVE 1014


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,751,177
Number of Sequences: 219361
Number of extensions: 1389679
Number of successful extensions: 2448
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2448
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)