>dbj|AK112287.1| Ciona intestinalis cDNA, clone:cicl053f16, full insert sequence
          Length = 636

 Score =  375 bits (189), Expect = e-101
 Identities = 296/312 (94%), Gaps = 15/312 (4%)
 Strand = Plus / Minus

                                                                       
Query: 65  ttcagttttgggnatattaggggcgtttgctttgtccaaaataataaaaccaaggtnccc 124
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 340 ttcagttttggg-atattaggggcgtttgctttgtccaaaataataaaaccaagg-cccc 283

                                                                       
Query: 125 ctaaaggagnaagcagaaatgtaagcagcaagacccctcncatgnatgtattgtaccatt 184
           |||||| || ||| ||||||| |||||||||||||| || |||| ||||||||| |||||
Sbjct: 282 ctaaag-ag-aag-agaaatg-aagcagcaagaccc-tc-catg-atgtattgt-ccatt 231

                                                                       
Query: 185 taccnctgtcaagcaaggaatgcaactggcttagcgtttcctttatccgtcaacagtttg 244
           |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 230 tacc-ctgt-aagcaaggaatgcaactggcttagcgtttcctttatc-gtcaacagtttg 174

                                                                       
Query: 245 tccaacacttggagggttccactatgatgtcatagatggttcctgcggtgacaagaaaaa 304
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 173 tccaacacttggagg-ttccactatgatgtcatagatggttcctgcggtgacaagaaaa- 116

                                                                       
Query: 305 taagacatcattacgattgcgaatacgaccattgcggatggttgtcgaacccatgacggt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 taagacatcattacgattgcgaatacgaccattgcggatggttgtcgaacccatgacggt 56

                       
Query: 365 ttctttagctta 376
           ||||||||||||
Sbjct: 55  ttctttagctta 44

>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence
          Length = 124367

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 233    gtcaacagtttgtccaacact 253
              |||||||||||||||||||||
Sbjct: 116723 gtcaacagtttgtccaacact 116703

>ref|XM_976449.1| PREDICTED: Mus musculus similar to CG33265-PA (LOC674689), mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 gttccactatgatgtcatag 279
           ||||||||||||||||||||
Sbjct: 856 gttccactatgatgtcatag 837

>ref|XM_976409.1| PREDICTED: Mus musculus similar to CG33265-PA (LOC674683), mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  gttccactatgatgtcatag 279
            ||||||||||||||||||||
Sbjct: 1039 gttccactatgatgtcatag 1020

>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 203311

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    gttccactatgatgtcatag 279
              ||||||||||||||||||||
Sbjct: 199952 gttccactatgatgtcatag 199933

>dbj|AK116858.1| Ciona intestinalis cDNA, clone:cilv016d13, full insert sequence
          Length = 1600

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 ctatgatgtcatagatggtt 285
           ||||||||||||||||||||
Sbjct: 476 ctatgatgtcatagatggtt 495


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,802,768
Number of Sequences: 3902068
Number of extensions: 2802768
Number of successful extensions: 48360
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48348
Number of HSP's gapped (non-prelim): 9
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)