Clone Name | rbasd1d12 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 450 bits (227), Expect = e-123 Identities = 389/443 (87%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 1322 tatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaag 1263 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 1262 tagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcatt 1203 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| || |||| || ||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 1202 ggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcca 1143 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| || ||||| || |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1142 agaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacca 1083 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||||||||||||||| | |||||||||||| Sbjct: 1082 ccgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagta 1023 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 ||||||||||||||| ||||||||| |||||||||||||| |||||||| || | | Sbjct: 1022 gccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagca 963 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || |||||||||||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 962 tctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaaca 903 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 902 tagtctctgtatatgatgtcatc 880
>dbj|AK121002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045A15, full insert sequence Length = 1696 Score = 450 bits (227), Expect = e-123 Identities = 389/443 (87%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 1413 tatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaag 1354 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 1353 tagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcatt 1294 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| || |||| || ||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 1293 ggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcca 1234 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| || ||||| || |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1233 agaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacca 1174 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||||||||||||||| | |||||||||||| Sbjct: 1173 ccgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagta 1114 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 ||||||||||||||| ||||||||| |||||||||||||| |||||||| || | | Sbjct: 1113 gccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagca 1054 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || |||||||||||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 1053 tctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaaca 994 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 993 tagtctctgtatatgatgtcatc 971
>dbj|AK104832.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A09, full insert sequence Length = 1749 Score = 450 bits (227), Expect = e-123 Identities = 389/443 (87%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 1466 tatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaag 1407 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 1406 tagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcatt 1347 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| || |||| || ||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 1346 ggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcca 1287 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| || ||||| || |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1286 agaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacca 1227 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||||||||||||||| | |||||||||||| Sbjct: 1226 ccgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagta 1167 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 ||||||||||||||| ||||||||| |||||||||||||| |||||||| || | | Sbjct: 1166 gccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagca 1107 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || |||||||||||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 1106 tctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaaca 1047 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 1046 tagtctctgtatatgatgtcatc 1024
>dbj|AK068154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A17, full insert sequence Length = 1772 Score = 442 bits (223), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 1492 tatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaag 1433 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 1432 tagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcatt 1373 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| || |||| || ||||| ||||| |||||||| ||||| || | ||||||| Sbjct: 1372 ggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtacattcca 1313 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| || ||||| || |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1312 agaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacca 1253 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||||||||||||||| | |||||||||||| Sbjct: 1252 ccgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagta 1193 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 ||||||||||||||| ||||||||| |||||||||||||| |||||||| || | | Sbjct: 1192 gccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagca 1133 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || |||||||||||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 1132 tctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaaca 1073 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 1072 tagtctctgtatatgatgtcatc 1050
>gb|BT019313.1| Zea mays clone Contig986.F mRNA sequence Length = 1773 Score = 406 bits (205), Expect = e-110 Identities = 385/445 (86%) Strand = Plus / Plus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 ||||||||||| |||||||||| |||||||| || || |||||||| || ||||| || Sbjct: 431 tatatgtcaagcagcaacctcctggggtcctcgacaacatccttgatgcgccgcaggaag 490 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 | |||||| |||||||| || |||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 491 aagacagcctctctgccatcgatcaacctgtggtcgtaagtcagcgcaaggtacatcatt 550 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| || Sbjct: 551 ggcctcgcaaggatgtcaccattcacaaccacagggcgttgcacaatggaatgcatcccc 610 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||| Sbjct: 611 agaatagacgactgtggagggttgatgataggtgtgctgaggaggcttccatagacacca 670 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||| |||||||| || | |||||||||||| Sbjct: 671 ccgttggagatagtgaatgttcctcctgccatgtcatcaatcgagagcgccccctcagtt 730 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 ||||||||||||||| |||||||||| ||||||||||| || |||||||| || | | Sbjct: 731 gccttctttgcaaggttgtttatccctttctcaatgtcagcaaagttcatggtatcagca 790 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || ||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | | Sbjct: 791 tctcggataacaggaaccacaaggcccttggaagtgccaacagcaacactgacgtctacg 850 Query: 702 tagtctctgtagatgatgtcatcgc 726 ||||||||||| ||||||||||||| Sbjct: 851 tagtctctgtatatgatgtcatcgc 875
>gb|AY581835.1| Cynodon dactylon putative 2-oxoglutarate dehydrogenase E2 subunit mRNA, partial cds Length = 741 Score = 402 bits (203), Expect = e-109 Identities = 383/443 (86%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 ||||||||||| ||||| |||| ||||| |||||||| |||||||| || || || || Sbjct: 500 tatatgtcaagcagcaatctcctagggtcttcaaccacatccttgatgcgccggaggaag 441 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 | ||||||||||||||| || |||||||| ||||| || |||| || |||||||||||| Sbjct: 440 aagacagcttctctgccatcaatcagcctgtggtcgtacgtcaaagcgaggtacatcatt 381 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| ||||||||||||| ||||||||| || ||||| ||||| |||||||| ||| Sbjct: 380 ggcctcgcgaggatgtcaccattcacaaccacaggtcgttgcacaatggaatgcatccca 321 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 |||||||||||||| || |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 320 agaattgctgactgtggcgggttgatgataggcgtgctaataaggcttccatagacacca 261 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 || ||||| || || |||||||| |||||||| ||||||||||| | |||||| ||||| Sbjct: 260 ccatttgaaatggtgaaggttcctcctgccatgtcatcaattgatagtgccccttcagtc 201 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 ||||||||||||||| |||||||||| ||||||||||| ||||| ||||| ||| | | Sbjct: 200 gccttctttgcaaggttgtttatccctttctcaatgtcagcgaaattcatgttttcagca 141 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || |||||||| || |||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 140 tctcggataacgggaaccacaagaccctttgaagtaccaacagcaacactgacatcaatg 81 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 80 tagtctctgtatatgatgtcatc 58
>gb|BT018803.1| Zea mays clone EL01N0529E04.d mRNA sequence Length = 1807 Score = 394 bits (199), Expect = e-106 Identities = 382/443 (86%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 ||||||||||| |||||||||| |||||||| || || |||||||| || ||||| || Sbjct: 1477 tatatgtcaagcagcaacctcctggggtcctcgacaacatccttgatgcgccgcaggaag 1418 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 | |||||| |||||||| || |||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 1417 aagacagcctctctgccatcgatcaacctgtggtcgtaagtcagcgcaaggtacatcatt 1358 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| || Sbjct: 1357 ggcctcgcaaggatgtcaccattcacaaccacagggcgttgcacaatggaatgcatcccc 1298 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1297 agaatagacgactgtggagggttgatgataggtgtgctgaggaggcttccatagacacca 1238 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 1237 ccgttggagatggtgaatgttcctcctgccatgtcatcaattgagagcgccccctcagtt 1178 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 || |||||||||||| |||||||||| ||||||||||| || |||||||| || | | Sbjct: 1177 gctttctttgcaaggttgtttatccctttctcaatgtcagcaaagttcatggtatcagca 1118 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || ||||||||||| |||||||| |||||||||||||||||||||||||| | ||| | | Sbjct: 1117 tctcggataacaggaaccacaaggcccttggaagtgccaacagcaacactgatgtctacg 1058 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 1057 tagtctctgtatatgatgtcatc 1035
>gb|AY103947.1| Zea mays PCO137266 mRNA sequence Length = 2074 Score = 371 bits (187), Expect = 2e-99 Identities = 379/443 (85%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 ||||||||||| |||||||||| |||||||| || || |||||||| || ||||| || Sbjct: 1652 tatatgtcaagcagcaacctcctggggtcctcgacaacatccttgatgcgccgcaggaag 1593 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 | |||||| |||||||| || |||| ||| ||||| || ||||| |||||| |||||||| Sbjct: 1592 aagacagcctctctgccatcgatcaacctgtggtcgtaagtcagcgcaaggaacatcatt 1533 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 ||||| || || |||||||||| ||||||||| |||||||| ||||| |||||||| || Sbjct: 1532 ggccttgcgagaatgtcaccattcacaaccacagggcgttgcacaatggaatgcatcccc 1473 Query: 462 agaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacaccg 521 ||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1472 agaatagacgactgtggagggttgatgataggtgtgctgaggaggcttccatagacacca 1413 Query: 522 ccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagtt 581 ||||| ||||| || || ||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 1412 ccgttggagatggtgaatgttccacctgccatgtcatcaattgagagcgccccctcagtt 1353 Query: 582 gccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgta 641 || |||||||||||| |||||||||| ||||||||||| || |||||||| || | | Sbjct: 1352 gctttctttgcaaggttgtttatccctttctcaatgtcagcaaagttcatggtatcagca 1293 Query: 642 tcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaatg 701 || ||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | | Sbjct: 1292 tctcggataacaggaaccacaaggcccttggaagtgccaacagcaacactgacgtctacg 1233 Query: 702 tagtctctgtagatgatgtcatc 724 ||||||||||| ||||||||||| Sbjct: 1232 tagtctctgtatatgatgtcatc 1210
>ref|XM_465972.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 349 bits (176), Expect = 8e-93 Identities = 377/444 (84%) Strand = Plus / Minus Query: 281 ctatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaa 340 ||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| || Sbjct: 1353 ctatatgtcaaggagcaaccttcgtggatcttcaaccacatccttgatacggcgcaagaa 1294 Query: 341 caggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcat 400 || |||||||| || || || ||||||||||||||||| | ||||||||||||||||| Sbjct: 1293 gagaacagcttccctaccatcgatcagcctatggtcatacattagtgcaaggtacatcat 1234 Query: 401 tggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcc 460 |||||| ||||||| |||| ||||||||| | ||||| ||||| ||||||||||| Sbjct: 1233 tggccttgcaaggacactgccattcacaaccacaagacgttgaacaatggaatgcattcc 1174 Query: 461 aagaattgctgactgaggagggttgatgataggtgtgctgataagacttccatagacacc 520 || |||| |||||| |||| || ||||||||||| |||||||| |||||||| ||||| Sbjct: 1173 gaggattgatgactgtggagaattaatgataggtgtactgataaggcttccataaacacc 1114 Query: 521 gccgtttgagattgtaaaggttccccctgccatctcatcaattgacaatgccccctcagt 580 || |||||||| |||||||| || |||||||| | | || ||| |||||||||||| Sbjct: 1113 accatttgagatggtaaaggtccctcctgccatattgttgatggactgtgccccctcagt 1054 Query: 581 tgccttctttgcaaggctgtttatccccttctcaatgtccgcgaagttcattccttctgt 640 |||||||||||||||| ||||||| |||||||| ||||| || || |||||| | ||| | Sbjct: 1053 tgccttctttgcaaggttgtttatacccttctctatgtcagcaaaattcattgcatctat 994 Query: 641 atcacggataacaggcaccacaagacccttggaagtgccaacagcaacactaacgtcaat 700 ||| |||||||| |||||||||||||||||||||| |||||||||||||| | |||||| Sbjct: 993 atcgtggataacaagcaccacaagacccttggaagttccaacagcaacactgatgtcaat 934 Query: 701 gtagtctctgtagatgatgtcatc 724 ||| || ||||||||||||||||| Sbjct: 933 gtactccctgtagatgatgtcatc 910
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 202 bits (102), Expect = 1e-48 Identities = 171/194 (88%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 44515 tatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaag 44456 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 44455 tagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcatt 44396 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| || |||| || ||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 44395 ggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcca 44336 Query: 462 agaattgctgactg 475 ||||| || ||||| Sbjct: 44335 agaatagcagactg 44322 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Minus Query: 480 gggttgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaag 539 |||||||||||||||||||||||||| ||||| || ||||| ||||| ||||| || || Sbjct: 44229 gggttgatgataggtgtgctgataaggcttccgtaaacaccaccgttagagatggtgaat 44170 Query: 540 gttccccctgccatctcatcaattgacaatgccccctcagttgccttctttgcaaggctg 599 ||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||| | Sbjct: 44169 gttcctcctgccatctcatcaattgagagtgccccctcagtagccttctttgcaagggcg 44110 Query: 600 tttatccccttctcaatgtccgcgaagttcattccttctgtatcacggataacaggcacc 659 |||||||| |||||||||||||| |||||||| || | ||| ||||||||||||||| Sbjct: 44109 tttatccctttctcaatgtccgcaaagttcatgttatcagcatctcggataacaggcacc 44050 Query: 660 acaagaccct 669 |||||||||| Sbjct: 44049 acaagaccct 44040 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 667 ccttggaagtgccaacagcaacactaacgtcaatgtagtctctgtagatgatgtcatc 724 |||||||||| |||||||||||||| | ||||| ||||||||||| ||||||||||| Sbjct: 43943 ccttggaagtaccaacagcaacactgatgtcaacatagtctctgtatatgatgtcatc 43886
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 202 bits (102), Expect = 1e-48 Identities = 171/194 (88%) Strand = Plus / Minus Query: 282 tatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcgcagaaac 341 |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || Sbjct: 19393261 tatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaag 19393202 Query: 342 aggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggtacatcatt 401 |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 19393201 tagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcatt 19393142 Query: 402 ggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatgcattcca 461 |||||||| || |||| || ||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 19393141 ggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcca 19393082 Query: 462 agaattgctgactg 475 ||||| || ||||| Sbjct: 19393081 agaatagcagactg 19393068 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Minus Query: 480 gggttgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaag 539 |||||||||||||||||||||||||| ||||| || ||||| ||||| ||||| || || Sbjct: 19392975 gggttgatgataggtgtgctgataaggcttccgtaaacaccaccgttagagatggtgaat 19392916 Query: 540 gttccccctgccatctcatcaattgacaatgccccctcagttgccttctttgcaaggctg 599 ||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||| | Sbjct: 19392915 gttcctcctgccatctcatcaattgagagtgccccctcagtagccttctttgcaagggcg 19392856 Query: 600 tttatccccttctcaatgtccgcgaagttcattccttctgtatcacggataacaggcacc 659 |||||||| |||||||||||||| |||||||| || | ||| ||||||||||||||| Sbjct: 19392855 tttatccctttctcaatgtccgcaaagttcatgttatcagcatctcggataacaggcacc 19392796 Query: 660 acaagaccct 669 |||||||||| Sbjct: 19392795 acaagaccct 19392786 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 667 ccttggaagtgccaacagcaacactaacgtcaatgtagtctctgtagatgatgtcatc 724 |||||||||| |||||||||||||| | ||||| ||||||||||| ||||||||||| Sbjct: 19392689 ccttggaagtaccaacagcaacactgatgtcaacatagtctctgtatatgatgtcatc 19392632 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 atcaattgacaatgccccctcagt 580 |||||||||||| ||||||||||| Sbjct: 23297229 atcaattgacaaagccccctcagt 23297206
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 159 bits (80), Expect = 2e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 275 atggaactatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcg 334 ||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct: 18652024 atggaactatatgtcaaggagcaaccttcgtggatcttcaaccacatccttgatacggcg 18651965 Query: 335 cagaaacaggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggta 394 || || || |||||||| || || || ||||||||||||||||| | ||||||||||| Sbjct: 18651964 caagaagagaacagcttccctaccatcgatcagcctatggtcatacattagtgcaaggta 18651905 Query: 395 catcattggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatg 454 |||||||||||| ||||||| |||| ||||||||| | ||||| ||||| ||||| Sbjct: 18651904 catcattggccttgcaaggacactgccattcacaaccacaagacgttgaacaatggaatg 18651845 Query: 455 cattccaagaattgctgact 474 |||||| || |||| ||||| Sbjct: 18651844 cattccgaggattgatgact 18651825 Score = 143 bits (72), Expect = 9e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 486 atgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttccc 545 ||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||| || Sbjct: 18651737 atgataggtgtactgataaggcttccataaacaccaccatttgagatggtaaaggtccct 18651678 Query: 546 cctgccatctcatcaattgacaatgccccctcagttgccttctttgcaaggctgtttatc 605 |||||||| | | || ||| |||||||||||||||||||||||||||| ||||||| Sbjct: 18651677 cctgccatattgttgatggactgtgccccctcagttgccttctttgcaaggttgtttata 18651618 Query: 606 cccttctcaatgtccgcgaagttcattccttctgtatcacggataacaggcaccacaaga 665 |||||||| ||||| || || |||||| | ||| |||| |||||||| ||||||||||| Sbjct: 18651617 cccttctctatgtcagcaaaattcattgcatctatatcgtggataacaagcaccacaaga 18651558 Query: 666 ccct 669 |||| Sbjct: 18651557 ccct 18651554 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 667 ccttggaagtgccaacagcaacactaacgtcaatgtagtctctgtagatgatgtcatc 724 |||||||||| |||||||||||||| | ||||||||| || ||||||||||||||||| Sbjct: 18651467 ccttggaagttccaacagcaacactgatgtcaatgtactccctgtagatgatgtcatc 18651410
>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1471_E11 Length = 103912 Score = 159 bits (80), Expect = 2e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 275 atggaactatatgtcaaggagcaacctccgtgggtcctcaaccacgtccttgatacggcg 334 ||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct: 78380 atggaactatatgtcaaggagcaaccttcgtggatcttcaaccacatccttgatacggcg 78321 Query: 335 cagaaacaggacagcttctctgccgtctatcagcctatggtcatatgtcagtgcaaggta 394 || || || |||||||| || || || ||||||||||||||||| | ||||||||||| Sbjct: 78320 caagaagagaacagcttccctaccatcgatcagcctatggtcatacattagtgcaaggta 78261 Query: 395 catcattggcctcgcaaggatgtcaccatccacaaccacggggcgttggacaatagaatg 454 |||||||||||| ||||||| |||| ||||||||| | ||||| ||||| ||||| Sbjct: 78260 catcattggccttgcaaggacactgccattcacaaccacaagacgttgaacaatggaatg 78201 Query: 455 cattccaagaattgctgact 474 |||||| || |||| ||||| Sbjct: 78200 cattccgaggattgatgact 78181 Score = 143 bits (72), Expect = 9e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 486 atgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttccc 545 ||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||| || Sbjct: 78093 atgataggtgtactgataaggcttccataaacaccaccatttgagatggtaaaggtccct 78034 Query: 546 cctgccatctcatcaattgacaatgccccctcagttgccttctttgcaaggctgtttatc 605 |||||||| | | || ||| |||||||||||||||||||||||||||| ||||||| Sbjct: 78033 cctgccatattgttgatggactgtgccccctcagttgccttctttgcaaggttgtttata 77974 Query: 606 cccttctcaatgtccgcgaagttcattccttctgtatcacggataacaggcaccacaaga 665 |||||||| ||||| || || |||||| | ||| |||| |||||||| ||||||||||| Sbjct: 77973 cccttctctatgtcagcaaaattcattgcatctatatcgtggataacaagcaccacaaga 77914 Query: 666 ccct 669 |||| Sbjct: 77913 ccct 77910 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 667 ccttggaagtgccaacagcaacactaacgtcaatgtagtctctgtagatgatgtcatc 724 |||||||||| |||||||||||||| | ||||||||| || ||||||||||||||||| Sbjct: 77823 ccttggaagttccaacagcaacactgatgtcaatgtactccctgtagatgatgtcatc 77766
>ref|NM_124889.3| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT5G55070 mRNA, complete cds Length = 1945 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaattgctgactgaggagggt 483 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1394 ccacaaccattggacgttgcacaattgaatgcattccaagaatagcagactgaggagggt 1335 Query: 484 tgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttc 543 |||||||||| ||||| |||||||||||||||||||| || ||||| | ||| || | || Sbjct: 1334 tgatgataggagtgcttataagacttccatagacaccaccatttgatactgtgaatgatc 1275 Query: 544 cccctgccatctcatcaattga 565 | |||||||||||||| ||||| Sbjct: 1274 ctcctgccatctcatcgattga 1253
>emb|AJ223803.1|ART223803 Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase E2 subunit Length = 1724 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaattgctgactgaggagggt 483 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1335 ccacaaccattggacgttgcacaatcgaatgcattccaagaatagcagactgaggagggt 1276 Query: 484 tgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttc 543 |||||||||| ||||| |||||||||||||||||||| || ||||| | ||| || | || Sbjct: 1275 tgatgataggagtgcttataagacttccatagacaccaccatttgatactgtgaatgatc 1216 Query: 544 cccctgccatctcatcaattga 565 | |||||||||||||| ||||| Sbjct: 1215 ctcctgccatctcatcgattga 1194
>gb|AY128726.1| Arabidopsis thaliana 2-oxoglutarate dehydrogenase E2 subunit (At5g55070) mRNA, complete cds Length = 1575 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaattgctgactgaggagggt 483 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1252 ccacaaccattggacgttgcacaattgaatgcattccaagaatagcagactgaggagggt 1193 Query: 484 tgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttc 543 |||||||||| ||||| |||||||||||||||||||| || ||||| | ||| || | || Sbjct: 1192 tgatgataggagtgcttataagacttccatagacaccaccatttgatactgtgaatgatc 1133 Query: 544 cccctgccatctcatcaattga 565 | |||||||||||||| ||||| Sbjct: 1132 ctcctgccatctcatcgattga 1111
>gb|AY042897.1| Arabidopsis thaliana 2-oxoglutarate dehydrogenase E2 subunit (MCO15.2) mRNA, complete cds Length = 1794 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaattgctgactgaggagggt 483 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1378 ccacaaccattggacgttgcacaattgaatgcattccaagaatagcagactgaggagggt 1319 Query: 484 tgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttc 543 |||||||||| ||||| |||||||||||||||||||| || ||||| | ||| || | || Sbjct: 1318 tgatgataggagtgcttataagacttccatagacaccaccatttgatactgtgaatgatc 1259 Query: 544 cccctgccatctcatcaattga 565 | |||||||||||||| ||||| Sbjct: 1258 ctcctgccatctcatcgattga 1237
>emb|BX831487.1|CNS0A1W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1720 Score = 131 bits (66), Expect = 4e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaattgctgactgaggagggt 483 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1341 ccacaaccattggacgttgcacaattgaatgcattccaagaatagcagactgaggagggt 1282 Query: 484 tgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttc 543 |||||||||| ||||| || ||||||||||||||||| || ||||| | ||| || | || Sbjct: 1281 tgatgataggagtgcttatgagacttccatagacaccaccatttgatactgtgaatgatc 1222 Query: 544 cccctgccatctcatcaattga 565 | |||||||||||||| ||||| Sbjct: 1221 ctcctgccatctcatcgattga 1200
>emb|BX831002.1|CNS0A1WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1790 Score = 123 bits (62), Expect = 9e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaattgctgactgaggagggt 483 ||||||||| || ||||| ||||| |||||| |||||||||| || ||||||||||||| Sbjct: 1394 ccacaaccattggacgttgcacaattgaatgccttccaagaatagcagactgaggagggt 1335 Query: 484 tgatgataggtgtgctgataagacttccatagacaccgccgtttgagattgtaaaggttc 543 |||||||||| ||||| || ||||||||||||||||| || ||||| | ||| || | || Sbjct: 1334 tgatgataggagtgcttatgagacttccatagacaccaccatttgatactgtgaatgatc 1275 Query: 544 cccctgccatctcatcaattga 565 | |||||||||||||| ||||| Sbjct: 1274 ctcctgccatctcatcgattga 1253
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 473 ctgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttgagat 532 ||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| | Sbjct: 8841 ctgaggagggttgatgataggagtgcttataagacttccatagacaccaccatttgatac 8782 Query: 533 tgtaaaggttccccctgccatctcatcaattga 565 ||| || | ||| |||||||||||||| ||||| Sbjct: 8781 tgtgaatgatcctcctgccatctcatcgattga 8749 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 424 ccacaaccacggggcgttggacaatagaatgcattccaagaat 466 ||||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 8983 ccacaaccattggacgttgcacaattgaatgcattccaagaat 8941
>ref|NM_179122.1| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT4G26910 transcript variant AT4G26910.3 mRNA, complete cds Length = 1565 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1059 gactgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 1001
>ref|NM_179121.1| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT4G26910 transcript variant AT4G26910.2 mRNA, complete cds Length = 1708 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1202 gactgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 1144
>ref|NM_118825.2| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT4G26910 transcript variant AT4G26910.1 mRNA, complete cds Length = 1807 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1301 gactgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 1243
>gb|BT000926.1| Arabidopsis thaliana clone C105123 putative dihydrolipoamide succinyltransferase (At4g26910) mRNA, complete cds Length = 1423 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1202 gactgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 1144
>gb|AY096643.1| Arabidopsis thaliana At4g26910 mRNA sequence Length = 1498 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1057 gactgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 999
>gb|AY084248.1| Arabidopsis thaliana clone 101175 mRNA, complete sequence Length = 1721 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1302 gactgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 1244
>gb|BT012996.1| Lycopersicon esculentum clone 114217F, mRNA sequence Length = 1897 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 363 atcagcctatggtcatatgtcagtgcaaggtacatcattgg 403 ||||||||||| ||||||||||| |||| |||||||||||| Sbjct: 1425 atcagcctatgatcatatgtcagcgcaatgtacatcattgg 1385 Score = 50.1 bits (25), Expect = 0.010 Identities = 91/113 (80%) Strand = Plus / Minus Query: 450 gaatgcattccaagaattgctgactgaggagggttgatgataggtgtgctgataagactt 509 ||||||||||| | || || ||||||||||| || ||||| || || || | ||||||| Sbjct: 1338 gaatgcattcccaagatagcagactgaggaggatttatgatgggagtacttagaagactt 1279 Query: 510 ccatagacaccgccgtttgagattgtaaaggttccccctgccatctcatcaat 562 ||||| ||||| || || || |||||||| | ||| || ||||| |||||||| Sbjct: 1278 ccatacacaccaccattggatattgtaaacgatcctccagccatttcatcaat 1226
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 473 ctgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 24251 ctgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 24307
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 473 ctgaggagggttgatgataggtgtgctgataagacttccatagacaccgccgtttga 529 ||||||||| || ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 68408 ctgaggaggattaatgatcggagtgcttatgagacttccatagacaccgccatttga 68464
>gb|BT013306.1| Lycopersicon esculentum clone 134953R, mRNA sequence Length = 1878 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 450 gaatgcattccaagaattgctgactgaggagggttgatgataggtgtgctgataagactt 509 ||||||||||| | || || ||||| ||||| || |||||||| || |||||||||||| Sbjct: 1358 gaatgcattcccaagatagcagactggggaggatttatgataggggtactgataagactt 1299 Query: 510 ccatagacaccgccgtttga 529 ||||| || || |||||||| Sbjct: 1298 ccatacactccaccgtttga 1279 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 363 atcagcctatggtcatatgtcagtgcaaggtacatcattgg 403 ||||||||||| || |||||||| |||| |||||||||||| Sbjct: 1445 atcagcctatgatcgtatgtcagagcaatgtacatcattgg 1405
>ref|NM_001004929.2| Xenopus tropicalis MGC89125 protein (MGC89125), mRNA Length = 2015 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 332 gcgcagaaacaggacagcttctctgcc 358 ||||| ||||||||||||||||||||| Sbjct: 1344 gcgcaaaaacaggacagcttctctgcc 1318
>gb|BC075393.1| Xenopus tropicalis MGC89125 protein, mRNA (cDNA clone MGC:89125 IMAGE:7006895), complete cds Length = 1855 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 332 gcgcagaaacaggacagcttctctgcc 358 ||||| ||||||||||||||||||||| Sbjct: 1336 gcgcaaaaacaggacagcttctctgcc 1310
>emb|CR762005.2| Xenopus tropicalis finished cDNA, clone TEgg040l24 Length = 2015 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 332 gcgcagaaacaggacagcttctctgcc 358 ||||| ||||||||||||||||||||| Sbjct: 1344 gcgcaaaaacaggacagcttctctgcc 1318
>ref|XM_608352.2| PREDICTED: Bos taurus similar to tetratricopeptide repeat domain 18 (LOC529891), mRNA Length = 4048 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 72 atcacaatatgtttgggaaactagta 97 ||||||||||||||||||||| |||| Sbjct: 1304 atcacaatatgtttgggaaacaagta 1329
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 371 atggtcatatgtcagtgcaaggtacatcattggc 404 ||||||||| | ||||||||| |||||||||||| Sbjct: 133234 atggtcataagacagtgcaagatacatcattggc 133201
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 44.1 bits (22), Expect = 0.64 Identities = 40/46 (86%) Strand = Plus / Plus Query: 452 atgcattccaagaattgctgactgaggagggttgatgataggtgtg 497 |||||| || ||||| ||||||||||||||||||| || |||||| Sbjct: 981954 atgcatgcccagaatccctgactgaggagggttgataatcggtgtg 981999
>gb|AC166108.4| Mus musculus BAC clone RP23-192E10 from chromosome 1, complete sequence Length = 188836 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ttgatgtttcttctacaattc 159 ||||||||||||||||||||| Sbjct: 60495 ttgatgtttcttctacaattc 60475
>gb|AC101813.5| Mus musculus chromosome 1, clone RP24-315D8, complete sequence Length = 159286 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ttgatgtttcttctacaattc 159 ||||||||||||||||||||| Sbjct: 69208 ttgatgtttcttctacaattc 69188
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 372 tggtcatatgtcagtgcaaggtacatcattggc 404 |||||||| | |||||| ||||||||||||||| Sbjct: 144063 tggtcataagacagtgctaggtacatcattggc 144095
>ref|XM_776429.1| PREDICTED: Strongylocentrotus purpuratus similar to dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) (LOC576084), mRNA Length = 1272 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 453 tgcattccaagaattgctgactgaggagggttgatgatagg 493 ||||| ||||| || ||||| ||||| |||||||||||||| Sbjct: 1100 tgcatgccaaggatagctgattgaggggggttgatgatagg 1060
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 tggtcatatgtcagtgcaaggtacatcattggc 404 |||||||| | |||||| ||||||||||||||| Sbjct: 1034302 tggtcataagacagtgctaggtacatcattggc 1034270
>ref|XM_472799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2439 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 557 atcaattgacaatgccccctcagt 580 |||||||||||| ||||||||||| Sbjct: 1353 atcaattgacaaagccccctcagt 1376
>gb|U13768.1|ASU13768 Nostoc sp. PCC 7120 ORF2, ORF1, and HglK (hglK) genes, complete cds Length = 3339 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 attccaagaattgctgactg 475 |||||||||||||||||||| Sbjct: 1812 attccaagaattgctgactg 1793
>gb|AC165436.5| Mus musculus chromosome 1, clone RP24-81A5, complete sequence Length = 186089 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 atggtcatatgtcagtgcaa 390 |||||||||||||||||||| Sbjct: 165695 atggtcatatgtcagtgcaa 165676
>gb|AC109262.13| Mus musculus chromosome 1, clone RP23-31H15, complete sequence Length = 241579 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 atggtcatatgtcagtgcaa 390 |||||||||||||||||||| Sbjct: 191824 atggtcatatgtcagtgcaa 191843
>gb|BC045016.1| Xenopus laevis dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex), mRNA (cDNA clone MGC:53142 IMAGE:5542668), complete cds Length = 1846 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 aacaggacagcttctctgcc 358 |||||||||||||||||||| Sbjct: 1340 aacaggacagcttctctgcc 1321
>emb|CR692238.1|CNS0FX2Y Tetraodon nigroviridis full-length cDNA Length = 1817 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 471 gactgaggagggttgatgataggtgtgc 498 ||||| ||||||||||| |||||||||| Sbjct: 1210 gactgcggagggttgattataggtgtgc 1183
>emb|AL161424.13| Human DNA sequence from clone RP11-175B12 on chromosome 13 Contains part of the DLEU1 gene for deleted in lymphocytic leukemia 1 (BCMS LEU1) and a novel gene, complete sequence Length = 126427 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 649 taacaggcaccacaagacccttgg 672 |||||||||||||| ||||||||| Sbjct: 14048 taacaggcaccacaggacccttgg 14071
>emb|AL133548.6| Human DNA sequence from clone RP11-235O14 on chromosome 9q13-21.2 Contains a novel gene (FLJ20559), the OSTF1 gene for osteoclast stimulating factor 1 (OSF, SH3P2) and a CpG island, complete sequence Length = 153392 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gcagaaacaggacagcttct 353 |||||||||||||||||||| Sbjct: 121403 gcagaaacaggacagcttct 121422
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 atcaattgacaatgccccctcagt 580 |||||||||||| ||||||||||| Sbjct: 14726 atcaattgacaaagccccctcagt 14703
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a protease pseuodogene, complete sequence Length = 189417 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 catgagtcaaaattttgtgt 224 |||||||||||||||||||| Sbjct: 118307 catgagtcaaaattttgtgt 118326
>gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, complete sequence Length = 110907 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tcaaaattttgtgtacaatt 230 |||||||||||||||||||| Sbjct: 9253 tcaaaattttgtgtacaatt 9272
>gb|AC026123.24| Homo sapiens 16 BAC RP11-174D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170088 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 ctttagcccagaagtgacaaatgg 278 ||||||||||||||||||| |||| Sbjct: 49665 ctttagcccagaagtgacatatgg 49642
>gb|AF440620.1|AF440620 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus section 2 of 2 Length = 440917 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 649 taacaggcaccacaagacccttgg 672 |||||||||||||| ||||||||| Sbjct: 215845 taacaggcaccacaggacccttgg 215868
>gb|AC005949.12| Homo sapiens chromosome 13 clone 468p13 map 13q14, complete sequence Length = 143107 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 649 taacaggcaccacaagacccttgg 672 |||||||||||||| ||||||||| Sbjct: 3944 taacaggcaccacaggacccttgg 3921
>gb|AC066692.3| Homo sapiens BAC clone RP11-424C23 from 2, complete sequence Length = 175028 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tatgtttgggaaactagtac 98 |||||||||||||||||||| Sbjct: 67909 tatgtttgggaaactagtac 67890
>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence Length = 183794 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tcaaaattttgtgtacaatt 230 |||||||||||||||||||| Sbjct: 110246 tcaaaattttgtgtacaatt 110265
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 attccaagaattgctgactg 475 |||||||||||||||||||| Sbjct: 939296 attccaagaattgctgactg 939315
>gb|AC011456.2|AC011456 Homo sapiens chromosome 19 clone CTC-360P9, complete sequence Length = 156357 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tagcccagaagtgacaaatg 277 |||||||||||||||||||| Sbjct: 23299 tagcccagaagtgacaaatg 23280
>dbj|AK119336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-C07, full insert sequence Length = 3172 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 557 atcaattgacaatgccccctcagt 580 |||||||||||| ||||||||||| Sbjct: 1632 atcaattgacaaagccccctcagt 1655
>emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chromosome 1p31.3-32.2 Contains the GADD45A gene for growth arrest and DNA-damage-inducible alpha, the 3' end of the GNG12 gene for guanine nucleotide binding protein (G protein) gamma 12 and a CpG island, complete sequence Length = 104198 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 caacaagtatcacctcagaa 122 |||||||||||||||||||| Sbjct: 3763 caacaagtatcacctcagaa 3782
>gb|AC102562.13| Mus musculus chromosome 18, clone RP23-205H1, complete sequence Length = 210975 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 gccttctttgcaaggctgtt 601 |||||||||||||||||||| Sbjct: 130085 gccttctttgcaaggctgtt 130066
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 ggagggttgatgataggtgt 496 |||||||||||||||||||| Sbjct: 1316063 ggagggttgatgataggtgt 1316044 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,890,326 Number of Sequences: 3902068 Number of extensions: 5890326 Number of successful extensions: 112800 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112422 Number of HSP's gapped (non-prelim): 356 length of query: 726 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 703 effective length of database: 17,143,297,704 effective search space: 12051738285912 effective search space used: 12051738285912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)