ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1COBQ_VIBCH (Q9KLL6) Cobyric acid synthase 29 6.0

>COBQ_VIBCH (Q9KLL6) Cobyric acid synthase|
          Length = 484

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 38  AGRSIIILGTNRVLARTCLQYTPSLYKPKN 127
           AG+S+++ G  RVLAR  +Q  P  +KP+N
Sbjct: 14  AGKSVLVAGLCRVLARRGIQVCP--FKPQN 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,422,222
Number of Sequences: 219361
Number of extensions: 981414
Number of successful extensions: 2293
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2293
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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