>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)|
          Length = 1273

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
 Frame = -1

Query: 542  NDDPPECRSEPQVSMHPPTGTY---QASISAPSNFGLRPFYCHPPPMQILPRENFAGSMP 372
            N   P   ++P  S +PPTG Y       S P  F   P    PPP+ +  R N   S+ 
Sbjct: 1066 NPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVFNKPP--TGPPPISMKKRSNKLASIE 1123

Query: 371  AFPMVGAQRQQVRYSQSLHLTPSRVQPP 288
              P  GA       S +  L PS  QPP
Sbjct: 1124 QNPSQGATYPPTLSSSASPLQPS--QPP 1149

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 25/101 (24%)
 Frame = -1

Query: 512  PQVSMHPPTGTYQASISAPSNFGLR-------------------PFYCHPPPMQILPREN 390
            PQ   HPP       +S PS F L                    P   HPPP+Q++P+  
Sbjct: 934  PQAHKHPP------HLSGPSPFSLNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 987

Query: 389  FAGSMPAFPMVGAQRQQV------RYSQSLHLTPSRVQPPQ 285
               S PA P    Q Q +        +  LH  PS+   PQ
Sbjct: 988  PLPSSPAQPPGLTQSQSLPPPAASHPTTGLHQVPSQSPFPQ 1028

>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3|
          Length = 802

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = -1

Query: 512 PQVSMHPPTGTYQA-SISAPSNFGLRPF--YCHPPPMQILPRENFAGSMPAFPMVGAQRQ 342
           P V   P T  YQ  S+  P     +P+  Y  PPP      +   GS P  PM    + 
Sbjct: 583 PAVGPPPQTNYYQGYSMPPPQQQQQQPYGNYGMPPPSH----DQGYGSQPPIPM---NQS 635

Query: 341 QVRYSQSLHLTPSRVQPPQGY 279
             RY  S+   P + Q PQGY
Sbjct: 636 YGRYQTSIPPPPPQQQIPQGY 656

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 26/102 (25%)
 Frame = -1

Query: 512  PQVSMHPPTGTYQASISAPSNFGLR-------------------PFYCHPPPMQILPREN 390
            PQ   HPP       +S PS F +                    P   HPPP+Q++P+  
Sbjct: 933  PQAHKHPP------HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 986

Query: 389  FAGSMPAFPMVGAQRQQV-------RYSQSLHLTPSRVQPPQ 285
               S PA P    Q Q +         +  LH  PS+   PQ
Sbjct: 987  PLPSSPAQPPGLTQSQSLPPPAASHPTTGGLHQVPSQSPFPQ 1028

>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 19/96 (19%)
 Frame = -1

Query: 512  PQVSMHPPTGTYQASISAPSNFGLR-------------------PFYCHPPPMQILPREN 390
            PQ   HPP       +S PS F +                    P   HPPP+Q++P+  
Sbjct: 942  PQAHKHPP------HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995

Query: 389  FAGSMPAFPMVGAQRQQVRYSQSLHLTPSRVQPPQG 282
               S PA P    Q Q +         P    PP G
Sbjct: 996  PLPSSPAQPPGLTQSQNLP-------PPPASHPPTG 1024



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -1

Query: 512  PQVSMHPPTGTYQASISAPSNFGLRPFYCHPPPMQILPRENFAGSMPAFPMVGAQ 348
            P  + HPPTG +Q +   P  F   PF    PP    P      + PA P   AQ
Sbjct: 1015 PPPASHPPTGLHQVAPQPP--FAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQ 1067

>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
           (ZAP113)
          Length = 1951

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
 Frame = -1

Query: 539 DDPPECRSEPQVSMHPPTGTYQASISAPSNF----GLRPFY--CHPPPMQILPRENFAGS 378
           + PPE    P  S  PP+ +Y      P ++      +P+     P P Q  P +++   
Sbjct: 144 ESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAP 203

Query: 377 MPAFPMVGAQRQQV-----RYSQSLHLTPSRVQPPQGY 279
            P++    +  Q        Y  S   +PSR  P QG+
Sbjct: 204 TPSYSSSSSSSQSYLSHSQSYLPSSQASPSR--PSQGH 239

>ANXA7_DICDI (P24639) Annexin A7 (Annexin VII) (Synexin)|
          Length = 462

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 5/90 (5%)
 Frame = -1

Query: 533 PPECRSEPQVSMHPPTGTYQASISAPSNFGLRPFYCHPPPMQILPRENFAGSMPAFPMVG 354
           PP+    PQ   +PP   Y      P   G  P   +PP     P++ +       P  G
Sbjct: 35  PPQQGYPPQQG-YPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQG 93

Query: 353 AQRQ-----QVRYSQSLHLTPSRVQPPQGY 279
              Q     Q  Y       P +  PPQGY
Sbjct: 94  YPPQQGYPPQQGYPPQQGYPPQQGYPPQGY 123

>DCP1_ARATH (Q9SJF3) mRNA decapping enzyme-like protein (EC 3.-.-.-) (DCP1|
           homolog)
          Length = 367

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
 Frame = -1

Query: 497 HPPTGTYQASISAPSNFGLRPFYCHPPPMQILPRENFAGSMPAFPMVGAQRQQVRYSQSL 318
           H P   +Q +I+ P      P    PPP+Q         S P   +     + +  + ++
Sbjct: 213 HQPHQPHQPTIAPPVAAAAPPQIQSPPPLQ--------SSSPLMTLFDNNPEVISSNSNI 264

Query: 317 H---LTPSRVQPPQGYINPHV 264
           H   +TPS   PP+    PH+
Sbjct: 265 HTDLVTPSFFGPPRMMAQPHL 285

>BRO1_GIBZE (Q4IBS9) Vacuolar protein-sorting protein BRO1 (BRO domain-containing|
            protein 1)
          Length = 995

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
 Frame = -1

Query: 542  NDDPPECRSEPQVSMHPPTGTYQASISAPSNFGLRPFYCHPPPMQIL------------- 402
            N  PP   +  Q    PP  T+      PS +G  P    PPP Q               
Sbjct: 842  NFSPPPTTTTTQSFGPPPINTFVQPTYNPSQYGRTPGPTSPPPNQTSFNIGGYRGPASPP 901

Query: 401  PRENFAGSMPAFPMVGAQRQQVRYSQSLHLTPSRVQPP 288
            P ++  G   +F   GA       +Q  ++ P  V PP
Sbjct: 902  PNQSTFGQSQSFGGYGA--SSTPQTQGGYVPPGFVPPP 937

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 26/95 (27%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
 Frame = -1

Query: 533 PPECRSEPQVSMH--PPTGTYQASISAPSNFGLRPFYCHPPPMQIL--PRENFAGSMPAF 366
           PP  R +PQ   +  PP    Q+   +P+     P Y  PPP  I   P   ++ S P  
Sbjct: 253 PPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPT 312

Query: 365 PMVGAQRQQVRYSQSLHLTPSRVQPPQGYINPHVY 261
           P                 TP+   PP  Y  P  Y
Sbjct: 313 P-----------------TPTFSPPPPAYSPPPTY 330

>PTSP_BOMMO (P82003) Prothoracicostatic peptide precursor (Bom-PTSP)|
          Length = 274

 Score = 25.4 bits (54), Expect(2) = 8.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 399 WQNLHRRWMAVKWPEPKIAWGR 464
           WQ+L+  W    W +   AWG+
Sbjct: 174 WQDLNSAWGKRAWQDMSSAWGK 195



 Score = 22.3 bits (46), Expect(2) = 8.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 362 WGKQAWIQQNSPLAKFA 412
           WGK+AW   NS   K A
Sbjct: 133 WGKRAWQDLNSAWGKRA 149


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,130,172
Number of Sequences: 219361
Number of extensions: 2013101
Number of successful extensions: 4576
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4559
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)