>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  113 bits (57), Expect = 6e-22
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                            
Query: 245      tagatggcggagagcctccgcagggcggccaccttgagctcgaggatgcagatgtactcg 304
                ||||| |||| |||| ||||||   |||||||||| ||||| ||||||||||||||||| 
Sbjct: 15451184 tagattgcggcgagcttccgcaacacggccaccttcagctcaaggatgcagatgtactca 15451243

                                                                            
Query: 305      gcggtctgccggagcagcacgtcgacatcggcgtcccgggcgtccgggactatcttcttg 364
                || || |||||||||||||| ||||| | | | ||  |||| || || ||||||||||| 
Sbjct: 15451244 gccgtttgccggagcagcacatcgacgttgtcctcatgggcatctggtactatcttcttc 15451303

                                                                 
Query: 365      agctccctcagcctcctcagcaccatgtgctggaagggcctcctgtgca 413
                |||||||| ||||||||| ||||||||||||| | |||| |||| ||||
Sbjct: 15451304 agctcccttagcctcctctgcaccatgtgctgaaggggcttcctatgca 15451352



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 3        aacaatggccggcttctgctgccaaacaaactcc 36
                ||||||||| ||||||| | ||||||||||||||
Sbjct: 15450968 aacaatggctggcttctccagccaaacaaactcc 15451001

>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score =  113 bits (57), Expect = 6e-22
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                          
Query: 245    tagatggcggagagcctccgcagggcggccaccttgagctcgaggatgcagatgtactcg 304
              ||||| |||| |||| ||||||   |||||||||| ||||| ||||||||||||||||| 
Sbjct: 100476 tagattgcggcgagcttccgcaacacggccaccttcagctcaaggatgcagatgtactca 100535

                                                                          
Query: 305    gcggtctgccggagcagcacgtcgacatcggcgtcccgggcgtccgggactatcttcttg 364
              || || |||||||||||||| ||||| | | | ||  |||| || || ||||||||||| 
Sbjct: 100536 gccgtttgccggagcagcacatcgacgttgtcctcatgggcatctggtactatcttcttc 100595

                                                               
Query: 365    agctccctcagcctcctcagcaccatgtgctggaagggcctcctgtgca 413
              |||||||| ||||||||| ||||||||||||| | |||| |||| ||||
Sbjct: 100596 agctcccttagcctcctctgcaccatgtgctgaaggggcttcctatgca 100644



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 3      aacaatggccggcttctgctgccaaacaaactcc 36
              ||||||||| ||||||| | ||||||||||||||
Sbjct: 100260 aacaatggctggcttctccagccaaacaaactcc 100293

>ref|XM_482651.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 282

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 239 gcgccgtagatggcggagagcctccgcagggcggccaccttgagctcgaggatgcagatg 298
           ||||||||||||||||||||| | || ||| |||| ||||||| ||| |||  |||||||
Sbjct: 278 gcgccgtagatggcggagagcttgcggaggacggcgaccttgacctccagggcgcagatg 219

                                                  
Query: 299 tactcggcggtctgccggagcagcacgtcgacatcggcg 337
           ||||||||||   |  |||||||| ||||||| ||||||
Sbjct: 218 tactcggcggcgcggtggagcagcgcgtcgacgtcggcg 180



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 356 atcttcttgagctccctcagcctcctcagcaccatgtgctggaagggcctcct 408
           |||||||| |||||||  |||| ||||||||||||  ||||||| ||||||||
Sbjct: 131 atcttcttcagctcccggagccgcctcagcaccatcagctggaacggcctcct 79

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                            
Query: 239      gcgccgtagatggcggagagcctccgcagggcggccaccttgagctcgaggatgcagatg 298
                ||||||||||||||||||||| | || ||| |||| ||||||| ||| |||  |||||||
Sbjct: 21646578 gcgccgtagatggcggagagcttgcggaggacggcgaccttgacctccagggcgcagatg 21646637

                                                       
Query: 299      tactcggcggtctgccggagcagcacgtcgacatcggcg 337
                ||||||||||   |  |||||||| ||||||| ||||||
Sbjct: 21646638 tactcggcggcgcggtggagcagcgcgtcgacgtcggcg 21646676



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 356      atcttcttgagctccctcagcctcctcagcaccatgtgctggaagggcctcct 408
                |||||||| |||||||  |||| ||||||||||||  ||||||| ||||||||
Sbjct: 21646725 atcttcttcagctcccggagccgcctcagcaccatcagctggaacggcctcct 21646777

>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0479C12
          Length = 136799

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                         
Query: 239   gcgccgtagatggcggagagcctccgcagggcggccaccttgagctcgaggatgcagatg 298
             ||||||||||||||||||||| | || ||| |||| ||||||| ||| |||  |||||||
Sbjct: 14148 gcgccgtagatggcggagagcttgcggaggacggcgaccttgacctccagggcgcagatg 14207

                                                    
Query: 299   tactcggcggtctgccggagcagcacgtcgacatcggcg 337
             ||||||||||   |  |||||||| ||||||| ||||||
Sbjct: 14208 tactcggcggcgcggtggagcagcgcgtcgacgtcggcg 14246



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 356   atcttcttgagctccctcagcctcctcagcaccatgtgctggaagggcctcct 408
             |||||||| |||||||  |||| ||||||||||||  ||||||| ||||||||
Sbjct: 14295 atcttcttcagctcccggagccgcctcagcaccatcagctggaacggcctcct 14347

>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0708B04
          Length = 170523

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                          
Query: 239    gcgccgtagatggcggagagcctccgcagggcggccaccttgagctcgaggatgcagatg 298
              ||||||||||||||||||||| | || ||| |||| ||||||| ||| |||  |||||||
Sbjct: 106752 gcgccgtagatggcggagagcttgcggaggacggcgaccttgacctccagggcgcagatg 106811

                                                     
Query: 299    tactcggcggtctgccggagcagcacgtcgacatcggcg 337
              ||||||||||   |  |||||||| ||||||| ||||||
Sbjct: 106812 tactcggcggcgcggtggagcagcgcgtcgacgtcggcg 106850



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 356    atcttcttgagctccctcagcctcctcagcaccatgtgctggaagggcctcct 408
              |||||||| |||||||  |||| ||||||||||||  ||||||| ||||||||
Sbjct: 106899 atcttcttcagctcccggagccgcctcagcaccatcagctggaacggcctcct 106951

>gb|AY106670.1| Zea mays PCO096646 mRNA sequence
          Length = 608

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 254 gagagcctccgcagggcggccaccttgagctcgaggatgcagatgtactcggcggtctgc 313
           ||||||||||| |||   |||||||| ||||| ||   ||||||||||||||||||| ||
Sbjct: 304 gagagcctccggaggagtgccaccttcagctccagcgcgcagatgtactcggcggtccgc 245

                            
Query: 314 cggagcagcacgtcgac 330
           ||||||| |||||||||
Sbjct: 244 cggagcaccacgtcgac 228



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 356 atcttcttgagctccctcagcctcctcagcaccatgtgctggaagggcc 404
           |||||||| ||||||| ||||| ||||||||||||| ||||||| ||||
Sbjct: 193 atcttcttcagctcccgcagccgcctcagcaccatgagctggaacggcc 145

>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
              sequence
          Length = 208153

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 507    ggttgctgtgtcactaacttgtg 529
              |||||||||||||||||||||||
Sbjct: 111286 ggttgctgtgtcactaacttgtg 111308

>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence
          Length = 355714

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 267   gggcggccaccttgagctcgag 288
             ||||||||||||||||||||||
Sbjct: 26135 gggcggccaccttgagctcgag 26156

>ref|XM_817114.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0092)
            partial mRNA
          Length = 2991

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 267  gggcggccaccttgagctcgag 288
            ||||||||||||||||||||||
Sbjct: 1729 gggcggccaccttgagctcgag 1708

>gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, complete sequence
          Length = 200195

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ctggaagggcctcctgtgca 413
              ||||||||||||||||||||
Sbjct: 182631 ctggaagggcctcctgtgca 182650

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    tctgccggagcagcacgtcg 328
              ||||||||||||||||||||
Sbjct: 833809 tctgccggagcagcacgtcg 833790

>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence
          Length = 216602

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    agctccctcagcctcctcag 384
              ||||||||||||||||||||
Sbjct: 100469 agctccctcagcctcctcag 100488

>gb|AC142318.1| Pan troglodytes BAC clone RP43-55D2 from 7, complete sequence
          Length = 166749

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   ctggaagggcctcctgtgca 413
             ||||||||||||||||||||
Sbjct: 53291 ctggaagggcctcctgtgca 53310

>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7
          Length = 349323

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 342  gggcgtccgggactatcttcttgagctc 369
            ||||| ||| ||||||||||||||||||
Sbjct: 2316 gggcggccgcgactatcttcttgagctc 2343

>gb|AC012325.9| Homo sapiens chromosome 16 clone RP11-93H5, complete sequence
          Length = 204524

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 423    ccaccacccccttggcctttccca 446
              |||||||| |||||||||||||||
Sbjct: 143016 ccaccaccaccttggcctttccca 142993

>gb|AC007249.5| Homo sapiens BAC clone RP11-320M2 from 2, complete sequence
          Length = 200491

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 365    agctccctcagcctcctcagcacc 388
              ||||||| ||||||||||||||||
Sbjct: 187152 agctcccacagcctcctcagcacc 187175

>gb|AC132186.3| Homo sapiens chromosome 16 clone CTD-2258A20, complete sequence
          Length = 157833

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   ccaccacccccttggcctttccca 446
             |||||||| |||||||||||||||
Sbjct: 52178 ccaccaccaccttggcctttccca 52155

>ref|NM_013058.2| Rattus norvegicus inhibitor of DNA binding 3 (Id3), mRNA
          Length = 983

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  gggtgtggggggtacacgag 111
           ||||||||||||||||||||
Sbjct: 712 gggtgtggggggtacacgag 731

>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    cggcgtcccgggcgtccggg 352
              ||||||||||||||||||||
Sbjct: 169443 cggcgtcccgggcgtccggg 169424

>gb|BC064658.1| Rattus norvegicus inhibitor of DNA binding 3, mRNA (cDNA clone
           MGC:72531 IMAGE:5623701), complete cds
          Length = 983

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  gggtgtggggggtacacgag 111
           ||||||||||||||||||||
Sbjct: 712 gggtgtggggggtacacgag 731

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 200     ggtgggccggaccgagacgg 219
               ||||||||||||||||||||
Sbjct: 2157972 ggtgggccggaccgagacgg 2157991

>emb|AL390778.31| Human DNA sequence from clone RP11-399H11 on chromosome 9 Contains the 3'
              end of the OLFM1 gene for olfactomedin 1, two putative
              novel transcripts and two CpG islands, complete sequence
          Length = 221372

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    cctcagcctcctcagcacca 389
              ||||||||||||||||||||
Sbjct: 149983 cctcagcctcctcagcacca 149964

>emb|AJ812656.1| Acinetobacter sp. 93A2 partial 16S rRNA gene, strain 93A2
          Length = 1433

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   aacaaactcccatgtgtgac 46
            ||||||||||||||||||||
Sbjct: 1374 aacaaactcccatgtgtgac 1355

>emb|AL627342.15| Mouse DNA sequence from clone RP23-281G20 on chromosome 4, complete
             sequence
          Length = 84122

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 373   cagcctcctcagcaccatgtgctg 396
             ||||| ||||||||||||||||||
Sbjct: 70128 cagccacctcagcaccatgtgctg 70105


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,542,166
Number of Sequences: 3902068
Number of extensions: 4542166
Number of successful extensions: 85086
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84919
Number of HSP's gapped (non-prelim): 165
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)