ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1b12 |
|---|---|
| Clone Library Name | barley_pub |
>NRK2_HUMAN (Q9NPI5) Nicotinamide riboside kinase 2 (EC 2.7.1.-) (Integrin| beta-1-binding protein 3) (Muscle integrin-binding protein) (MIBP) Length = 230 Score = 209 bits (533), Expect = 4e-54 Identities = 99/167 (59%), Positives = 125/167 (74%), Gaps = 1/167 (0%) Frame = -1 Query: 617 CVVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNEL 441 CV+HQDDFFKPQD+I V EDGFKQ+DV+ +LDMEAM+ T+ W P KF R+HG++ + Sbjct: 30 CVIHQDDFFKPQDQIAVGEDGFKQWDVLESLDMEAMLDTVQAWLSSPQKFARAHGVSVQP 89 Query: 440 DSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRNYTVPD 261 ++ HIL++EGFLLY+YKPL+DL+++ YFL+VPY+ECK RRS+RNYTVPD Sbjct: 90 EAS---------DTHILLLEGFLLYSYKPLVDLYSRRYFLTVPYEECKWRRSTRNYTVPD 140 Query: 260 PPGLFDGHVWPMYIKHKNIMEELTVNVEQLDGTNTREELFNRVYGDI 120 PPGLFDGHVWPMY K++ ME V V LDG +REELF V DI Sbjct: 141 PPGLFDGHVWPMYQKYRQEMEANGVEVVYLDGMKSREELFREVLEDI 187
>NRK2_MOUSE (Q9D7C9) Nicotinamide riboside kinase 2 (EC 2.7.1.-) (Integrin| beta-1-binding protein 3) (Muscle integrin-binding protein) (MIBP) Length = 195 Score = 205 bits (522), Expect = 8e-53 Identities = 99/167 (59%), Positives = 126/167 (75%), Gaps = 1/167 (0%) Frame = -1 Query: 617 CVVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNEL 441 CV+HQDDFFKPQD+I V EDGFKQ+DV+ +LDME M+ST+ W KDP KF R+HG++ L Sbjct: 30 CVIHQDDFFKPQDQIAVGEDGFKQWDVLESLDMETMLSTVQAWVKDPHKFARAHGVS--L 87 Query: 440 DSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRNYTVPD 261 S A H+L++EGFLLY+Y+PL+DL+++ YFL+VPY+ECKRRR SR Y VPD Sbjct: 88 QSGA-------SDTHVLLLEGFLLYSYRPLVDLYSQRYFLTVPYEECKRRRRSRTYMVPD 140 Query: 260 PPGLFDGHVWPMYIKHKNIMEELTVNVEQLDGTNTREELFNRVYGDI 120 PPGLFDGHVWPMY K++ ME+ V V LDG + E LF++V DI Sbjct: 141 PPGLFDGHVWPMYQKYRREMEQDGVEVVYLDGMKSPEGLFHQVLEDI 187
>NRK1_RAT (Q6AY91) Nicotinamide riboside kinase 1 (EC 2.7.1.-)| Length = 195 Score = 177 bits (450), Expect = 2e-44 Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 1/166 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ QDDFFKP+ +I++ E+GF QYDV+ AL+ME MMS + W ++P Sbjct: 32 VISQDDFFKPESEIDIDENGFLQYDVLEALNMEKMMSAVSCWMENPGS------------ 79 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRNYTVPDP 258 S P E + + ILI+EGFLL+ YKPL ++ + YFL+VPY+ECKRRRS+R Y PDP Sbjct: 80 SAGPAALESAQGVPILIIEGFLLFNYKPLDTIWNRSYFLTVPYEECKRRRSTRVYEPPDP 139 Query: 257 PGLFDGHVWPMYIKHKNIMEELTVNVEQLDGTNTREELFNRVYGDI 120 PG FDGHVWPMY+KH+ M +T ++ LDGT + E+LF++VY D+ Sbjct: 140 PGYFDGHVWPMYLKHRQEMNSITWDIVYLDGTRSEEDLFSQVYEDV 185
>NRK1_MOUSE (Q91W63) Nicotinamide riboside kinase 1 (EC 2.7.1.-)| Length = 195 Score = 177 bits (450), Expect = 2e-44 Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 1/166 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ QDDFFKP+ +I++ E+GF QYDV+ AL+ME MMS + W ++P Sbjct: 32 VISQDDFFKPESEIDIDENGFLQYDVLEALNMEKMMSAVSCWMENPGS------------ 79 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRNYTVPDP 258 S P E + + ILI+EGFLL+ YKPL ++ + YFL+VPY+ECKRRRS+R Y PDP Sbjct: 80 SAGPAALESAQGVPILIIEGFLLFNYKPLDTIWNRSYFLTVPYEECKRRRSTRVYEPPDP 139 Query: 257 PGLFDGHVWPMYIKHKNIMEELTVNVEQLDGTNTREELFNRVYGDI 120 PG FDGHVWPMY+KH+ M +T ++ LDGT + E+LF++VY D+ Sbjct: 140 PGYFDGHVWPMYLKHRQEMSSITWDIVYLDGTRSEEDLFSQVYEDV 185
>NRK1_HUMAN (Q9NWW6) Nicotinamide riboside kinase 1 (EC 2.7.1.-)| Length = 199 Score = 168 bits (426), Expect = 1e-41 Identities = 82/167 (49%), Positives = 111/167 (66%), Gaps = 1/167 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVE-DGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ QDDFFKP+ +IE + +GF QYDV+ AL+ME MMS I W + Sbjct: 32 VISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWMESARH------------ 79 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRNYTVPDP 258 S D E E + ILI+EGFLL+ YKPL ++ + YFL++PY+ECKRRRS+R Y PD Sbjct: 80 SVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYEECKRRRSTRVYQPPDS 139 Query: 257 PGLFDGHVWPMYIKHKNIMEELTVNVEQLDGTNTREELFNRVYGDIL 117 PG FDGHVWPMY+K++ M+++T V LDGT + E+LF +VY D++ Sbjct: 140 PGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQVYEDLI 186
>NRK1_SCHPO (Q9C0W1) Probable nicotinamide riboside kinase 1 (EC 2.7.1.-)| Length = 230 Score = 67.0 bits (162), Expect = 4e-11 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 27/176 (15%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGI------ 453 +VH+DDF+K +I V++G +D +L+++A + + + R HG+ Sbjct: 34 LVHEDDFYKTDAEIPVKNGIADWDCQESLNLDAFLENLH--------YIRDHGVLPTHLR 85 Query: 452 NNELDSEAPQDAEKRESL--------------HILIVEGFLLYTYKPLIDLFTKCYFLSV 315 N E + AP+ + + H++ V+GF++Y + LI+ F L Sbjct: 86 NRENKNVAPEALIEYADIIKEFKAPAIPTLEQHLVFVDGFMMYVNEDLINAFDIRLMLVT 145 Query: 314 PYDECKRRRSSRNYTV------PDPPGLFDGHVWPMYIK-HKNIMEELTVNVEQLD 168 +D KRRR +R + DPP F+ +VWP Y+ H ++ V + LD Sbjct: 146 DFDTLKRRREARTGYITLEGFWQDPPHYFENYVWPGYVHGHSHLFVNGDVTGKLLD 201
>NRK1_ASHGO (P62511) Nicotinamide riboside kinase 1 (EC 2.7.1.-)| Length = 241 Score = 51.6 bits (122), Expect = 2e-06 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK--QYDVITALDMEAMMSTID---------------GWQK 486 +VHQDDF++ D++ ++ ++ +DV ALDM +D G Sbjct: 43 LVHQDDFYRHDDEVPFDEEYQIGNWDVPEALDMAQFERELDHIRATGRPAAKLVHNGNID 102 Query: 485 DPAKFERSHGINNELDSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYD 306 D KF GI+ E E + R S +++V+GF+LY + F + PY Sbjct: 103 DVGKF----GISEEYLEELRRRYRGRISQPVVLVDGFMLYHDDKVAARFDCRLLVRAPYA 158 Query: 305 ECKRRRSSR-NYTV-----PDPPGLFDGHVWPMY 222 K RR+SR Y DPP FD V+ Y Sbjct: 159 TMKARRASRGGYKTLDSFWQDPPFYFDKFVYKSY 192
>NRK1_YEAST (P53915) Nicotinamide riboside kinase 1 (EC 2.7.1.-)| Length = 240 Score = 47.0 bits (110), Expect = 4e-05 Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 24/155 (15%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGF--KQYDVITALDMEAMMSTIDGWQK--------------- 486 ++H+DDF+K +++ V+ + + +D ALD + +D ++ Sbjct: 35 LIHEDDFYKHDNEVPVDAKYNIQNWDSPEALDFKLFGKELDVIKQTGKIATKLIHNNNVD 94 Query: 485 DP-AKFERSHGINNELDSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPY 309 DP KF + +EL +A D+ + ++IV+GF+++ + F + PY Sbjct: 95 DPFTKFHIDRQVWDEL--KAKYDSINDDKYEVVIVDGFMIFNNTGISKKFDLKILVRAPY 152 Query: 308 DECKRRRSSR-NYTV-----PDPPGLFDGHVWPMY 222 + K+RR+SR Y DPP FD V+ Y Sbjct: 153 EVLKKRRASRKGYQTLDSFWVDPPYYFDEFVYESY 187
>URK_VIBCH (Q9KT67) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 39.3 bits (90), Expect = 0.009 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD +ALD + + + + A + Sbjct: 42 VITEDCYYKDQSHLSMEERVKTNYDHPSALDHDLLCQHLQMLARGEAVEVPEYSYTEHTR 101 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 +E ++ ++I+EG LL T L DL F+ P D C RR R+ Sbjct: 102 TEQTTTMTPKK---VIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRD 152
>URK_PASMU (Q9CM85) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 216 Score = 38.5 bits (88), Expect = 0.016 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 6/119 (5%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKD-----PAKFERSHGI 453 ++ +D ++K Q +++ED K YD ++D ++ + + P H Sbjct: 44 IISEDSYYKDQSHLDMEDRIKTNYDHPNSMDRHLLIEHLKALKSGQPVDIPVYSYVEHTR 103 Query: 452 NNELDSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 N++ P+ ++I+EG LL T + L D + F+ P D C RR R+ Sbjct: 104 TNQVQHFEPKK--------VIILEGILLLTDEKLRDEVSVSVFVDTPLDICFIRRLQRD 154
>URK_VIBVY (Q7MM12) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 38.1 bits (87), Expect = 0.021 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++ Q + +E+ K YD ALD + + ++ K + + Sbjct: 42 VITEDCYYNDQSHLSMEERVKTNYDHPNALDHDLLCEHLEKLMKGESVEVPEYSYTEHTR 101 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 +E ++ ++I+EG LL T L DL F+ P D C RR R+ Sbjct: 102 TENTTTMTPKK---VIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRD 152
>URK_VIBVU (Q8D8F4) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 38.1 bits (87), Expect = 0.021 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++ Q + +E+ K YD ALD + + ++ K + + Sbjct: 42 VITEDCYYNDQSHLSMEERVKTNYDHPNALDHDLLCEHLEKLMKGESVEVPEYSYTEHTR 101 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 +E ++ ++I+EG LL T L DL F+ P D C RR R+ Sbjct: 102 TENTTTMTPKK---VIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRD 152
>URK_SALTY (P67408) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 38.1 bits (87), Expect = 0.021 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD A+D + + ++ A + + ++ Sbjct: 43 VIPEDSYYKDQSHLSMEERVKTNYDHPNAMDHSLLFQHLQALKRGSAI---ELPVYSYVE 99 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 Q+ + E ++I+EG LL T L + F+ P D C RR R+ Sbjct: 100 HTRMQETVRVEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRD 153
>URK_SALTI (P67409) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 38.1 bits (87), Expect = 0.021 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD A+D + + ++ A + + ++ Sbjct: 43 VIPEDSYYKDQSHLSMEERVKTNYDHPNAMDHSLLFQHLQALKRGSAI---ELPVYSYVE 99 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 Q+ + E ++I+EG LL T L + F+ P D C RR R+ Sbjct: 100 HTRMQETVRVEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRD 153
>URK_SHIFL (P0A8F7) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 37.0 bits (84), Expect = 0.046 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD +A+D ++ + ++ A + + ++ Sbjct: 43 VIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAI---DLPVYSYVE 99 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 ++ E ++I+EG LL T L D F+ P D C RR R+ Sbjct: 100 HTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRD 153
>URK_ECOLI (P0A8F4) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 37.0 bits (84), Expect = 0.046 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD +A+D ++ + ++ A + + ++ Sbjct: 43 VIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAI---DLPVYSYVE 99 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 ++ E ++I+EG LL T L D F+ P D C RR R+ Sbjct: 100 HTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRD 153
>URK_ECOL6 (P0A8F5) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 37.0 bits (84), Expect = 0.046 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD +A+D ++ + ++ A + + ++ Sbjct: 43 VIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAI---DLPVYSYVE 99 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 ++ E ++I+EG LL T L D F+ P D C RR R+ Sbjct: 100 HTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRD 153
>URK_ECO57 (P0A8F6) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 37.0 bits (84), Expect = 0.046 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD +A+D ++ + ++ A + + ++ Sbjct: 43 VIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAI---DLPVYSYVE 99 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 ++ E ++I+EG LL T L D F+ P D C RR R+ Sbjct: 100 HTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRD 153
>URK_VIBPA (Q87N09) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 36.6 bits (83), Expect = 0.061 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKF--ERSHGINNE 444 V+ +D ++ Q + +E+ K YD +ALD + + ++ + A E S+ + Sbjct: 42 VITEDCYYNDQSHLSMEERVKTNYDHPSALDHDLLCEHLEKLVRGEAVEVPEYSYTEHTR 101 Query: 443 LDSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 + +K ++I+EG LL T L DL F+ P D C RR R+ Sbjct: 102 TSNTTTMTPKK-----VIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRD 152
>ACM3_CHICK (P49578) Muscarinic acetylcholine receptor M3| Length = 639 Score = 36.6 bits (83), Expect = 0.061 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -1 Query: 311 YDECKRRRSSRNYTVPDPPGLFDGHVW 231 Y C ++RSS+NYTVPDP FD W Sbjct: 5 YQLCFQKRSSQNYTVPDPTSCFDVPPW 31
>URK_YERPE (Q8ZFZ9) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 34.7 bits (78), Expect = 0.23 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 6/119 (5%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+ +D ++K Q + +E+ K YD +A+D ++ + + + L Sbjct: 43 VIPEDGYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHLQA-------LKAGKPVELPLY 95 Query: 437 SEAPQDAEKRESLH-----ILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 S + K+E++H ++I+EG LL T L F+ P D C RR R+ Sbjct: 96 SYT-EHTRKKETVHLEPKKVIILEGILLLTDIRLRQEMNFSIFVDTPLDICLMRRMKRD 153
>URK_HAEIN (P44533) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 213 Score = 34.3 bits (77), Expect = 0.30 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDGFK-QYDVITALDMEAMMSTIDGWQKD-----PAKFERSHGI 453 ++ +D ++K Q +E+ + K YD ++D + ++ + + P H Sbjct: 41 IITEDSYYKDQSHLEMTERVKTNYDHPNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTR 100 Query: 452 NNELDSEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRR----- 288 NE P+ I+I+EG LL T + + L F+ P D C RR Sbjct: 101 TNETTHFTPK--------RIVILEGILLLTDERVRQLADISVFVDTPLDICFIRRLQRDM 152 Query: 287 SSRNYTVPDPPGLFDGHVWPMYIKHKNIMEELTVNVEQLDGTNTREELFNRVYGDILDLI 108 R ++ + V PM+++ ++ V G N N + IL L+ Sbjct: 153 EERGRSLQSVIDQYRATVRPMFLQFIEPSKQYADIVIPRGGKN--RIAINMLKAQILHLL 210 Query: 107 NSK 99 N K Sbjct: 211 NQK 213
>URK_SHEON (Q8EDX4) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)| (Cytidine monophosphokinase) Length = 212 Score = 32.7 bits (73), Expect = 0.87 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 1/114 (0%) Frame = -1 Query: 614 VVHQDDFFKPQDKIEVEDG-FKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELD 438 V+++D +++ Q + +++ YD ALD + + + + + A + + Sbjct: 41 VINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYT---E 97 Query: 437 SEAPQDAEKRESLHILIVEGFLLYTYKPLIDLFTKCYFLSVPYDECKRRRSSRN 276 + K ++I+EG LL T L +L F+ P D C RR +R+ Sbjct: 98 HTRMAETVKMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRD 151
>YRR6_CAEEL (Q10000) Hypothetical protein R144.6| Length = 345 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +1 Query: 469 SNLAGSFCQPSIVLI---IASISNAVITSYCLNPSSTSILSWGLKKSSW 606 S+ G FC S ++I I S +N +S + PS T+ WG+ ++SW Sbjct: 235 SHYIGIFCTASALMIGYVIYSRNNPFASSRLVGPSMTAGSMWGIAQASW 283
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = -3 Query: 273 HRSRSTGTV*WPCLAYVHKAQEHNGRINS*C*ATGWDKYQRRVVQQSVW 127 HR ST T+ LA + HNG IN+ W+K + +++ S+W Sbjct: 237 HRRFSTNTMPKWSLAQPMRFMAHNGEINTLLGNLNWNKSKESLLKSSIW 285
>RPOC2_MAIZE (P16025) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1527 Score = 30.4 bits (67), Expect = 4.3 Identities = 19/78 (24%), Positives = 39/78 (50%) Frame = -1 Query: 605 QDDFFKPQDKIEVEDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELDSEAP 426 ++++ ++K +G +Y+++ E S+ DG +K+ E ++E DSE Sbjct: 720 EEEYGSLENKYRTREGEGEYEILEEESEEEYGSSEDGSEKEYGTLEEDSEEDSEEDSEDE 779 Query: 425 QDAEKRESLHILIVEGFL 372 + + +S IL EGF+ Sbjct: 780 YGSPEEDS--ILKKEGFI 795
>RPOC2_SORBI (Q01923) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) (Fragment) Length = 435 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/78 (24%), Positives = 39/78 (50%) Frame = -1 Query: 605 QDDFFKPQDKIEVEDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELDSEAP 426 ++++ ++K +G +Y+++ E S+ DG +K+ E ++E DSE Sbjct: 305 EEEYGSLENKYRTREGEGEYEILEEDSEEEYGSSEDGSEKEYGTLEEDSEEDSEEDSEDE 364 Query: 425 QDAEKRESLHILIVEGFL 372 + + +S IL EGF+ Sbjct: 365 YGSPEEDS--ILKKEGFI 380
>IDI_CITFR (Q7X5H2) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) (IPP:DMAPP isomerase) Length = 182 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -1 Query: 332 CYFLSVPYDECKRRRSSRNYTVPDPPGLFDGHVWPMYIKHKNIMEELTVNVEQL 171 C+ L D + Y DP G+ + V P+Y H I+ EL +N +++ Sbjct: 85 CFELGADIDSLSPVYTDFRYCATDPSGIVENEVCPVYAAH--IVSELQLNPDEV 136
>HMP_SHIFL (Q7C0F9) Flavohemoprotein (Hemoglobin-like protein)| (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) (NO oxygenase) (NOD) Length = 396 Score = 29.6 bits (65), Expect = 7.4 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Frame = -1 Query: 545 DVITALDMEAMMSTIDGWQKDPAKFERSHGINNELDSEAPQDAEKRES--------LHIL 390 D + L T W + P++ +R+ G + DSE D K E ++ Sbjct: 306 DEVKELGQSLPRFTAHTWYRQPSEADRAKG---QFDSEGLMDLSKLEGAFSDPTMQFYLC 362 Query: 389 IVEGFLLYTYKPLIDLFTK 333 GF+ +T K L+DL K Sbjct: 363 GPVGFMQFTAKQLVDLGVK 381
>HMP_ECOLI (P24232) Flavohemoprotein (Hemoglobin-like protein)| (Flavohemoglobin) (HMP) (Nitric oxide dioxygenase) (EC 1.14.12.17) (NO oxygenase) (NOD) Length = 396 Score = 29.6 bits (65), Expect = 7.4 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Frame = -1 Query: 545 DVITALDMEAMMSTIDGWQKDPAKFERSHGINNELDSEAPQDAEKRES--------LHIL 390 D + L T W + P++ +R+ G + DSE D K E ++ Sbjct: 306 DEVKELGQSLPRFTAHTWYRQPSEADRAKG---QFDSEGLMDLSKLEGAFSDPTMQFYLC 362 Query: 389 IVEGFLLYTYKPLIDLFTK 333 GF+ +T K L+DL K Sbjct: 363 GPVGFMQFTAKQLVDLGVK 381
>HEMK_RICFE (Q4UJU4) Bifunctional methyltransferase [Includes: HemK protein| homolog (EC 2.1.1.-); tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA(m7G46)-methyltransferase)] Length = 527 Score = 29.3 bits (64), Expect = 9.7 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 20/86 (23%) Frame = -1 Query: 596 FFKPQDKIEVEDGFKQYDVITAL------DMEAMMSTIDGWQK----DPAKFERSHG--- 456 F KP KI +E GFKQ + +T + ++E++ + G + P RS+ Sbjct: 261 FLKPNGKIVLEIGFKQEEAVTQIFLSNGYNIESVYKDLQGHSRVILFSPINLNRSYARRI 320 Query: 455 -------INNELDSEAPQDAEKRESL 399 N LD+E P+ +E L Sbjct: 321 GKSLSGLQQNLLDNELPKYLFSKEKL 346
>RPOC2_SACOF (Q6ENX1) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1534 Score = 29.3 bits (64), Expect = 9.7 Identities = 19/78 (24%), Positives = 38/78 (48%) Frame = -1 Query: 605 QDDFFKPQDKIEVEDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELDSEAP 426 ++++ ++K +G +Y+++ E S+ DG +K+ E ++E DSE Sbjct: 727 EEEYGSLENKYRTREGEGEYEILEEDSEEEYGSSEDGSEKEYGTLEEDSEEDSEEDSEDE 786 Query: 425 QDAEKRESLHILIVEGFL 372 + + S IL EGF+ Sbjct: 787 YGSPEENS--ILKKEGFI 802
>RPOC2_SACHY (Q6L3A5) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1534 Score = 29.3 bits (64), Expect = 9.7 Identities = 19/78 (24%), Positives = 38/78 (48%) Frame = -1 Query: 605 QDDFFKPQDKIEVEDGFKQYDVITALDMEAMMSTIDGWQKDPAKFERSHGINNELDSEAP 426 ++++ ++K +G +Y+++ E S+ DG +K+ E ++E DSE Sbjct: 727 EEEYGSLENKYRTREGEGEYEILEEDSEEEYGSSEDGSEKEYGTLEEDSEEDSEEDSEDE 786 Query: 425 QDAEKRESLHILIVEGFL 372 + + S IL EGF+ Sbjct: 787 YGSPEENS--ILKKEGFI 802 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,801,620 Number of Sequences: 219361 Number of extensions: 1831332 Number of successful extensions: 4602 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4487 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4588 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
