Clone Name | rbasd1b02 |
---|---|
Clone Library Name | barley_pub |
>B2_DAUCA (P37707) B2 protein| Length = 207 Score = 142 bits (358), Expect = 9e-34 Identities = 64/86 (74%), Positives = 76/86 (88%) Frame = -1 Query: 642 HQLHGVFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRRLCKALEEDAFRPVLHHY 463 HQLHGVFEAASFGG+NIDPTAWEDKK +GESRFPAQVR+ R++C+ LEED+FRP+LHHY Sbjct: 122 HQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHY 181 Query: 462 DGPKFRLELSIAETLSLLDLCKSEDA 385 DGPKFRLEL+I E +SLLD+ + A Sbjct: 182 DGPKFRLELNIPEAISLLDIFEETKA 207
>ALDO1_ARATH (Q7G193) Aldehyde oxidase 1 (EC 1.2.3.1) (AtAO-1) (AtAO1)| Length = 1368 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 13/74 (17%) Frame = -1 Query: 507 KALEEDAFRPV-------LHHYDGPKFRLELS-IAETLSLLDLCKSEDA*SA-----SEH 367 KA++ED + + +G +F LELS I + +L+D +++ + E Sbjct: 4 KAIDEDKVEAMKSSKTSLVFAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEG 63 Query: 366 GCGCSVVLFSKYHP 325 GCG VVL SKY P Sbjct: 64 GCGACVVLLSKYDP 77
>AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = -1 Query: 615 ASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRRLCKALEEDAFRPVLHHYD 460 A+ GG+ +DP E+++C E F ++I + + L D +RP+L D Sbjct: 79 ATGGGTILDP---ENRRCMQERGFVVFLKINVNTQLERLAHDRYRPLLQQID 127
>IRG1_MOUSE (P54987) Immune-responsive protein 1 (Fragment)| Length = 646 Score = 31.6 bits (70), Expect = 2.2 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 195 HLRGLLLPSTRSFLGEMQPPTNSLRFHGRRTEQNIVKTSSTTYR 326 H G LL + L +++ P +G+R N++KTS TT++ Sbjct: 589 HCFGFLLHLPSNELSKVESPETETSVYGKRLVYNLIKTSPTTFK 632
>ALDO2_ARATH (Q7G192) Aldehyde oxidase 2 (EC 1.2.3.1) (AtAO-2) (AtAO3)| Length = 1321 Score = 30.8 bits (68), Expect = 3.7 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = -1 Query: 462 DGPKFRLELSIAE-TLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 325 +G +F LELS + + +LL+ + + + S E GCG VVL SK+ P Sbjct: 8 NGQRFELELSSVDPSTTLLEFLRYQTSFKSVKLSCGEGGCGACVVLLSKFDP 59
>ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (AtAO2)| Length = 1337 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = -1 Query: 462 DGPKFRLELSIAETLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 325 +G KF + LS+ + +LL+ +S S E GCG +V+ SKY P Sbjct: 11 NGEKFEV-LSVNPSTTLLEFLRSNTCFKSVKLSCGEGGCGACIVILSKYDP 60
>VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (Minor| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP42] Length = 1912 Score = 30.0 bits (66), Expect = 6.3 Identities = 17/66 (25%), Positives = 29/66 (43%) Frame = +3 Query: 126 HK*GEHTDHRXLRTNGTNTETGSHLRGLLLPSTRSFLGEMQPPTNSLRFHGRRTEQNIVK 305 H+ GE H R+ + + H G L R+FLG++ PP ++ R++ Sbjct: 1398 HRHGEKAAHSSRRSPTSRAASAHHRPGSSLTRERNFLGDVIPPGITIVAQAVRSDNRNQG 1457 Query: 306 TSSTTY 323 +T Y Sbjct: 1458 YQATAY 1463
>KRA31_HUMAN (Q9BYR8) Keratin-associated protein 3-1 (Keratin-associated protein| 3.1) (High sulfur keratin-associated protein 3.1) Length = 98 Score = 29.6 bits (65), Expect = 8.2 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 9/52 (17%) Frame = -3 Query: 214 RSRPLRCEPVSVLVPFVRNXR*SVCSPYLC---------ICSAVCPPPAGKP 86 RS + P + F ++ R VC P C IC CPPP KP Sbjct: 7 RSCSVPTGPATTFCSFDKSCRCGVCLPSTCPHEISLLQPICCDTCPPPCCKP 58
>RNZ_LACAC (Q5FKH3) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3| endonuclease) Length = 312 Score = 29.6 bits (65), Expect = 8.2 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Frame = +3 Query: 135 GEHTDHRXLRTN---------GTNTETGSHLRGLL-LPSTRSFLGEMQPPTNSLRFHGRR 284 GE T H+ LRTN + G H+ GL L STRSF G++ P L +G Sbjct: 39 GEATQHQILRTNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVGP----LTIYGPA 94 Query: 285 TEQNIVKTSSTTYRDDI 335 ++ VK S R I Sbjct: 95 GIEDFVKISLKVSRTKI 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,672,931 Number of Sequences: 219361 Number of extensions: 2551013 Number of successful extensions: 6035 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5787 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6029 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)