Clone Name | rbasd0h12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... | 246 | 6e-75 | 2 | PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... | 44 | 3e-04 | 3 | PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... | 31 | 2.2 | 4 | RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigment... | 30 | 3.8 |
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>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 246 bits (628), Expect(2) = 6e-75 Identities = 114/114 (100%), Positives = 114/114 (100%) Frame = -1 Query: 505 HVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHD 326 HVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHD Sbjct: 255 HVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHD 314 Query: 325 YGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 164 YGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS Sbjct: 315 YGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368 Score = 54.7 bits (130), Expect(2) = 6e-75 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = -3 Query: 578 EEPEGRESLQKLWQRYRVDIAYFG 507 EEPEGRESLQKLWQRYRVDIAYFG Sbjct: 231 EEPEGRESLQKLWQRYRVDIAYFG 254
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 43.9 bits (102), Expect = 3e-04 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 10/102 (9%) Frame = -1 Query: 505 HVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGTIFVVAGGGG-----SHLSSYTTAI 356 H+H YER PL + ++ + T+Y+ ++ G G S S Sbjct: 499 HIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIESHSEFSDGEGLT 558 Query: 355 PKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 230 ++ YGF+KLT FN ++L +E ++ DG V DS T+ Sbjct: 559 NITALLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 31.2 bits (69), Expect = 2.2 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 9/93 (9%) Frame = -1 Query: 505 HVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSHLSSYTTAI---P 353 HVH YER+ + N +G + I++ G GG+ T + P Sbjct: 356 HVHAYERS-----ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQP 410 Query: 352 KWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 254 K+S FR+ +G L N + F + ++ DG Sbjct: 411 KYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 30.4 bits (67), Expect = 3.8 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Frame = -1 Query: 493 YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 320 + ++ PL Q S VN ++ + G T G + T WS + + G Sbjct: 914 HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973 Query: 319 FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 140 + + N L + +S +G +YDS+ L +HD+C + S+ H Sbjct: 974 KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024 Query: 139 VNVMEGHPSNKIV 101 +++ + P K+V Sbjct: 1025 LSIEKSRPEVKLV 1037 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,649,574 Number of Sequences: 219361 Number of extensions: 1286980 Number of successful extensions: 3247 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3245 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)