>EF1G_DROME (Q9NJH0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
          Length = 431

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = -2

Query: 342 FCPVSVSEFRSKNAARKPASG-------KKQAEKKRKLDKEAVPEEENGAADETNAAE 190
           F P   +EF++K  A KP          KK  EKK    K A P EE  AADE  AAE
Sbjct: 212 FDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAEPAEELDAADEALAAE 269

>ERF2_ZYGRO (Q9HGI4) Eukaryotic peptide chain release factor GTP-binding|
           subunit (ERF2) (Translation release factor 3)
           (Polypeptide release factor 3) (ERF3) (ERF-3)
          Length = 662

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -2

Query: 333 VSVSEFRSKNAARKPASGKKQAEKKRKLDKEAVPEEENGAADE 205
           VS S  +  NA +KP   +K+ E+ +K +K+A P+E+    +E
Sbjct: 130 VSSSGIKLANATKKPKEDEKKEEEPKKEEKKAEPKEQESKKEE 172

>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neurofilament|
            protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1026

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -2

Query: 354  SPPPFCPVSVSEFRSKNAARKPASGKKQAEKKRKLDKEAVPEEENGAADETNAAED 187
            +P    P    E + + A  KP   K +A+K+   DK+ VP  E  A  +    ED
Sbjct: 870  APKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKED 925

>MAAY3_SCHCO (P37934) Mating-type protein A-alpha Y3|
          Length = 926

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 351 PPPFCP-VSVSEFRSKNAARKPASGKKQAEKKRKLDKEAVPEEENGAADETNAAED 187
           P  F P V+++E R+K  ARK        EKK++ +KEA  EE+    +   A +D
Sbjct: 608 PDDFAPFVALAEKRAKRRARK--------EKKKQAEKEARKEEKRARKEAKQAKKD 655

>RL12_PYRAB (Q9UXS6) 50S ribosomal protein L12P|
          Length = 107

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 336 PVSVSEFRSKNAARKPASGKKQAEKKRKLDKEAVPEEE 223
           PV+V+   +   A  PA  KK+ EKK +  +E V EEE
Sbjct: 60  PVAVAAAPAAAPAEAPAEEKKEEEKKEEEKEEEVSEEE 97

>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)|
          Length = 2025

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = -2

Query: 351  PPPFCPVSVSEFRSKNAARKPASGKKQAEKKRKLD---KEAVPEEENGAADETNAAED*F 181
            P     +++ + ++KN     + G +++E KRK +   K A  EEE    +  N+ ED  
Sbjct: 1561 PQKLIEINLIDNQNKNQEVYQSEGCRESEMKRKTELKGKVATEEEEEEEEEGANSIED-- 1618

Query: 180  FRPCARLNLNHNSRRT 133
                   N NH +R T
Sbjct: 1619 ------SNSNHGNRNT 1628

>PTMS_HUMAN (P20962) Parathymosin|
          Length = 101

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 330 SVSEFRSKNAARKPASGKKQAEKKRKLDKEAVPEEENGA-ADETNAAED 187
           + +E  +K+   K    +++A +K +  KE V EEENGA  +E   AED
Sbjct: 7   AAAELSAKDLKEKKEKVEEKASRKER-KKEVVEEEENGAEEEEEETAED 54

>RRP1_DROME (P27864) Recombination repair protein 1 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
          Length = 679

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 315 RSKNAARKPASGKKQAEKKRKLDKE-AVPEEENGAADETNAAE 190
           R+K   ++PA GKKQ   K+  DKE  V EEE   + ET  A+
Sbjct: 310 RAKKEGKEPAPGKKQ---KKSADKENGVVEEEAKPSTETKPAK 349

>DKC1_ARATH (Q9LD90) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)|
           (Nucleolar protein NAP57 homolog) (Nopp-140-associated
           protein of 57 kDa homolog) (AtNAP57)
          Length = 565

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 336 PVSVSEFRSKNAARKPASGK-KQAEKKRKLDKEAVPEEENGA 214
           PV+  + ++K    + A  K K ++KK+K DKE   EEE G+
Sbjct: 453 PVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGS 494


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,564,138
Number of Sequences: 219361
Number of extensions: 1591045
Number of successful extensions: 4255
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4239
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)