ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC065810.1| Mus musculus cDNA clone IMAGE:3825663, partial cds 46 0.15
2ref|XM_701999.1| PREDICTED: Danio rerio similar to Solute carrie... 46 0.15
3emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on ch... 46 0.15
4dbj|AB093603.1| Turnip mosaic virus gene for polyprotein, comple... 44 0.58
5emb|AL161669.5|CNS01RHC Human chromosome 14 DNA sequence BAC R-7... 44 0.58
6dbj|AB076532.1| Turnip mosaic virus CP gene for polyprotein, par... 44 0.58
7gb|AY739095.1| Takifugu rubripes frMCM8, frQ9UJA2, frPLCB1, frAL... 42 2.3
8gb|AC114818.4| Mus musculus BAC clone RP23-47O11 from 8, complet... 42 2.3
9gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, comp... 42 2.3
10gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.3
11gb|AC090338.6| Homo sapiens chromosome 18, clone RP11-704C2, com... 42 2.3
12gb|AC021506.5|AC021506 Homo sapiens chromosome 18, clone RP11-17... 42 2.3
13ref|XM_227201.3| PREDICTED: Rattus norvegicus similar to SH3-con... 42 2.3
14gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complet... 42 2.3
15gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome... 42 2.3
16gb|AC137764.6| Mus musculus chromosome 3, clone RP24-512E12, com... 42 2.3
17gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, comple... 42 2.3
18emb|CT030193.7| Mouse DNA sequence from clone RP24-272P19 on chr... 42 2.3
19ref|NM_192437.1| Oryza sativa (japonica cultivar-group), predic... 40 9.1
20gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
21gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
22gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 9.1
23gb|BT013557.1| Lycopersicon esculentum clone 132294F, mRNA sequence 40 9.1
24gb|BC088560.1| Xenopus tropicalis zinc finger, MYND-type contain... 40 9.1
25gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome... 40 9.1
26gb|AC004519.1| Homo sapiens BAC clone CTB-41H4 from 7, complete ... 40 9.1
27emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chro... 40 9.1
28emb|BX470067.4| Human DNA sequence from clone WI2-84067D5 on chr... 40 9.1
29emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chr... 40 9.1
30emb|AL513349.11| Human DNA sequence from clone RP11-566G9 on chr... 40 9.1
31emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on ch... 40 9.1
32emb|AL022101.1|HS845O24 Human DNA sequence from clone RP5-845O24... 40 9.1
33ref|NM_001011379.1| Xenopus tropicalis zinc finger, MYND-type co... 40 9.1
34emb|AL662858.15| Mouse DNA sequence from clone RP23-166O21 on ch... 40 9.1
35emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chr... 40 9.1
36dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
38dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
39dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
40emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal pr... 40 9.1
41dbj|AK106271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
42dbj|AK101868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
43emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on ch... 40 9.1
44dbj|AK060747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
45emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, compl... 40 9.1
46emb|CR848399.2| Xenopus tropicalis finished cDNA, clone TNeu136j05 40 9.1
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
48emb|AL844550.5| Mouse DNA sequence from clone RP23-277K21 on chr... 40 9.1
49gb|DQ249470.1| Daphnia pulex microsatellite Dp1498 sequence 40 9.1 
>gb|BC065810.1| Mus musculus cDNA clone IMAGE:3825663, partial cds
          Length = 906

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 232 aggcactgcctctttatccagtt 254
           |||||||||||||||||||||||
Sbjct: 503 aggcactgcctctttatccagtt 481
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>ref|XM_701999.1| PREDICTED: Danio rerio similar to Solute carrier family 13
            (sodium-dependent dicarboxylate transporter), member 2,
            transcript variant 7 (LOC572872), mRNA
          Length = 2502

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 250  cagtttcctcttcttttcagctt 272
            |||||||||||||||||||||||
Sbjct: 1303 cagtttcctcttcttttcagctt 1281
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>emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on chromosome 11, complete
             sequence
          Length = 219695

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 232   aggcactgcctctttatccagtt 254
             |||||||||||||||||||||||
Sbjct: 32558 aggcactgcctctttatccagtt 32580
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>dbj|AB093603.1| Turnip mosaic virus gene for polyprotein, complete cds,
            isolate:PV0104
          Length = 9798

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 253  tttcctcttcttttcagcttgcttct 278
            |||||||| |||||||||||||||||
Sbjct: 8785 tttcctctccttttcagcttgcttct 8760
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>emb|AL161669.5|CNS01RHC Human chromosome 14 DNA sequence BAC R-736N17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192462

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 541    cagattttctaagccaacaatc 562
              ||||||||||||||||||||||
Sbjct: 144584 cagattttctaagccaacaatc 144563
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>dbj|AB076532.1| Turnip mosaic virus CP gene for polyprotein, partial cds,
           isolate:PV0104
          Length = 864

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 253 tttcctcttcttttcagcttgcttct 278
           |||||||| |||||||||||||||||
Sbjct: 63  tttcctctccttttcagcttgcttct 38
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>gb|AY739095.1| Takifugu rubripes frMCM8, frQ9UJA2, frPLCB1, frAL834445, frCDC5L, and
             frSUPTH3 genes, complete sequence; frRUNT (frRUNT) gene,
             complete cds; and frFSTL6 gene, complete sequence
          Length = 109075

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 250   cagtttcctcttcttttcagcttgc 274
             ||||||||||| |||||||||||||
Sbjct: 67447 cagtttcctctccttttcagcttgc 67423
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>gb|AC114818.4| Mus musculus BAC clone RP23-47O11 from 8, complete sequence
          Length = 100405

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    gacaatgtttggaacagaaac 45
             |||||||||||||||||||||
Sbjct: 21232 gacaatgtttggaacagaaac 21212
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>gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, complete sequence
          Length = 187070

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    gacaatgtttggaacagaaac 45
             |||||||||||||||||||||
Sbjct: 12024 gacaatgtttggaacagaaac 12004
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 389     atgaagtctggggatggtgga 409
               |||||||||||||||||||||
Sbjct: 1606065 atgaagtctggggatggtgga 1606085
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>gb|AC090338.6| Homo sapiens chromosome 18, clone RP11-704C2, complete sequence
          Length = 200525

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 244  tttatccagtttcctcttctt 264
            |||||||||||||||||||||
Sbjct: 6847 tttatccagtttcctcttctt 6827
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>gb|AC021506.5|AC021506 Homo sapiens chromosome 18, clone RP11-173L6, complete sequence
          Length = 155863

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   tttatccagtttcctcttctt 264
             |||||||||||||||||||||
Sbjct: 28614 tttatccagtttcctcttctt 28634
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>ref|XM_227201.3| PREDICTED: Rattus norvegicus similar to SH3-containing guanine
            nucleotide exchange factor (LOC310460), mRNA
          Length = 2921

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 511  ttggttgttaacaacttctgc 531
            |||||||||||||||||||||
Sbjct: 1946 ttggttgttaacaacttctgc 1926
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>gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complete sequence
          Length = 169147

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   agaagaagcagaaaggattga 457
             |||||||||||||||||||||
Sbjct: 39099 agaagaagcagaaaggattga 39079
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>gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome 17, complete sequence
          Length = 214723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    gacaatgtttggaacagaaac 45
             |||||||||||||||||||||
Sbjct: 83544 gacaatgtttggaacagaaac 83524
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>gb|AC137764.6| Mus musculus chromosome 3, clone RP24-512E12, complete sequence
          Length = 148074

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 433   tctaagaagaagcagaaagga 453
             |||||||||||||||||||||
Sbjct: 55474 tctaagaagaagcagaaagga 55454
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>gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, complete sequence
          Length = 190998

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 25     gacaatgtttggaacagaaac 45
              |||||||||||||||||||||
Sbjct: 115000 gacaatgtttggaacagaaac 114980
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>emb|CT030193.7| Mouse DNA sequence from clone RP24-272P19 on chromosome 17, complete
              sequence
          Length = 159435

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 25     gacaatgtttggaacagaaac 45
              |||||||||||||||||||||
Sbjct: 158270 gacaatgtttggaacagaaac 158250
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>ref|NM_192437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5289

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   ttggaacagaaacagagcca 52
            ||||||||||||||||||||
Sbjct: 3301 ttggaacagaaacagagcca 3320
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>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018K14,
              complete sequence
          Length = 152725

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    ttgtttctaaattaaattct 435
              ||||||||||||||||||||
Sbjct: 135323 ttgtttctaaattaaattct 135342
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>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0542B04, complete sequence
          Length = 182823

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   ttgtttctaaattaaattct 435
             ||||||||||||||||||||
Sbjct: 35367 ttgtttctaaattaaattct 35386
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     ctcttcttttcagcttgctt 276
               ||||||||||||||||||||
Sbjct: 3659791 ctcttcttttcagcttgctt 3659772
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>gb|BT013557.1| Lycopersicon esculentum clone 132294F, mRNA sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 ttcttttcagcttgcttctt 279
           ||||||||||||||||||||
Sbjct: 632 ttcttttcagcttgcttctt 613
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>gb|BC088560.1| Xenopus tropicalis zinc finger, MYND-type containing 12, mRNA (cDNA
           clone MGC:97745 IMAGE:6987619), complete cds
          Length = 1183

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cctactattgtgattcagat 158
           ||||||||||||||||||||
Sbjct: 152 cctactattgtgattcagat 171
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>gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome 9, complete sequence
          Length = 144131

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ggtgagagcttgtatcagat 369
             ||||||||||||||||||||
Sbjct: 64407 ggtgagagcttgtatcagat 64388
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>gb|AC004519.1| Homo sapiens BAC clone CTB-41H4 from 7, complete sequence
          Length = 107889

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 644   acttgatgggcacagctgag 663
             ||||||||||||||||||||
Sbjct: 71774 acttgatgggcacagctgag 71755
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>emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chromosome 1, complete
              sequence
          Length = 153012

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    tctggggatggtggagcaag 414
              ||||||||||||||||||||
Sbjct: 128842 tctggggatggtggagcaag 128861
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>emb|BX470067.4| Human DNA sequence from clone WI2-84067D5 on chromosome 1 Contains a
             two preferentially expressed antigen in melanoma (PRAME)
             pseudogenes and the 5' end of the gene for a novel protein
             similar to preferentially expressed antigen in melanoma
             (PRAME), complete sequence
          Length = 41516

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   tctggggatggtggagcaag 414
             ||||||||||||||||||||
Sbjct: 24417 tctggggatggtggagcaag 24436
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>emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chromosome 1 Contains the
            3' end of a novel gene  similar to preferentially
            expressed antigen in melanoma (PRAME), two novel proteins
            similar to preferentially expressed antigen in melanoma
            (PRAME), a novel gene and a CpG island, complete sequence
          Length = 88806

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 395  tctggggatggtggagcaag 414
            ||||||||||||||||||||
Sbjct: 1427 tctggggatggtggagcaag 1408
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>emb|AL513349.11| Human DNA sequence from clone RP11-566G9 on chromosome 1 Contains part
             of the NEGR1 gene for neuronal growth regulator 1,
             complete sequence
          Length = 149587

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 585   cttcatttacattactgcat 604
             ||||||||||||||||||||
Sbjct: 26997 cttcatttacattactgcat 27016
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>emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on chromosome 1 Contains six
              novel genes similar to preferentially expressed antigen in
              melanoma (PRAME), two novel genes, two preferentially
              expressed antigen in melanoma (PRAME) pseudogenes and a CpG
              island, complete sequence
          Length = 184591

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    tctggggatggtggagcaag 414
              ||||||||||||||||||||
Sbjct: 153698 tctggggatggtggagcaag 153717
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>emb|AL022101.1|HS845O24 Human DNA sequence from clone RP5-845O24 on chromosome 1p36.1-36.2
             Contains the 3' end of the gene for a novel protein
             similar to preferentially expressed antigen in melanoma
             (PRAME) (LOC65121), four genes for novel proteins similar
             to preferentially expressed antigen in melanoma (PRAME)
             (LOC343068, LOC65122, LOC343070 and LOC343071), a novel
             gene, a pseudogene similar to preferentially expressed
             antigen in melanoma (PRAME) and the gene for a novel
             protein similar to heterogeneous nuclear ribonucleoprotein
             C (C1/C2) (HNRPC) (LOC343069), complete sequence
          Length = 119198

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   tctggggatggtggagcaag 414
             ||||||||||||||||||||
Sbjct: 11437 tctggggatggtggagcaag 11418
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>ref|NM_001011379.1| Xenopus tropicalis zinc finger, MYND-type containing 12 (zmynd12),
           mRNA
          Length = 1183

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cctactattgtgattcagat 158
           ||||||||||||||||||||
Sbjct: 152 cctactattgtgattcagat 171
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>emb|AL662858.15| Mouse DNA sequence from clone RP23-166O21 on chromosome 11, complete
             sequence
          Length = 195612

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    gacaatgtttggaacagaaa 44
             ||||||||||||||||||||
Sbjct: 96730 gacaatgtttggaacagaaa 96749
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>emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chromosome 1, complete
             sequence
          Length = 186712

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   tctggggatggtggagcaag 414
             ||||||||||||||||||||
Sbjct: 82852 tctggggatggtggagcaag 82833
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 416      ttgtttctaaattaaattct 435
                ||||||||||||||||||||
Sbjct: 20216225 ttgtttctaaattaaattct 20216244
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       ttggaacagaaacagagcca 52
                ||||||||||||||||||||
Sbjct: 26694719 ttggaacagaaacagagcca 26694700



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 266      tcagcttgcttcttgcctga 285
                ||||||||||||||||||||
Sbjct: 20485815 tcagcttgcttcttgcctga 20485796
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>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1156H12
          Length = 159509

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  tcagcttgcttcttgcctga 285
            ||||||||||||||||||||
Sbjct: 9637 tcagcttgcttcttgcctga 9618
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>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0694A04
          Length = 141476

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ttggaacagaaacagagcca 52
             ||||||||||||||||||||
Sbjct: 41811 ttggaacagaaacagagcca 41792
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>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6
          Length = 957

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 599 ctgcattagagttagccttg 618
           ||||||||||||||||||||
Sbjct: 631 ctgcattagagttagccttg 612
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>dbj|AK106271.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G09, full
           insert sequence
          Length = 2320

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  ttggaacagaaacagagcca 52
           ||||||||||||||||||||
Sbjct: 113 ttggaacagaaacagagcca 132
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>dbj|AK101868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070D24, full
            insert sequence
          Length = 3160

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  tcagcttgcttcttgcctga 285
            ||||||||||||||||||||
Sbjct: 2660 tcagcttgcttcttgcctga 2679
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>emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on chromosome 9, complete
              sequence
          Length = 208050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ggtgagagcttgtatcagat 369
              ||||||||||||||||||||
Sbjct: 118319 ggtgagagcttgtatcagat 118300
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>dbj|AK060747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F03, full
            insert sequence
          Length = 1595

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  tcagcttgcttcttgcctga 285
            ||||||||||||||||||||
Sbjct: 1110 tcagcttgcttcttgcctga 1129
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>emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, complete sequence
          Length = 269619

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   ttgtttctaaattaaattct 435
             ||||||||||||||||||||
Sbjct: 95659 ttgtttctaaattaaattct 95678
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>emb|CR848399.2| Xenopus tropicalis finished cDNA, clone TNeu136j05
          Length = 1163

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cctactattgtgattcagat 158
           ||||||||||||||||||||
Sbjct: 155 cctactattgtgattcagat 174
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 416      ttgtttctaaattaaattct 435
                ||||||||||||||||||||
Sbjct: 20501094 ttgtttctaaattaaattct 20501113
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>emb|AL844550.5| Mouse DNA sequence from clone RP23-277K21 on chromosome 2, complete
             sequence
          Length = 118080

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   gggtggcggtgagagcttgt 362
             ||||||||||||||||||||
Sbjct: 60949 gggtggcggtgagagcttgt 60930
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>gb|DQ249470.1| Daphnia pulex microsatellite Dp1498 sequence
          Length = 434

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 aattaaattctaagaagaag 444
           ||||||||||||||||||||
Sbjct: 158 aattaaattctaagaagaag 177


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,863,999
Number of Sequences: 3902068
Number of extensions: 6863999
Number of successful extensions: 137206
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136898
Number of HSP's gapped (non-prelim): 308
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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