ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0h06 |
|---|---|
| Clone Library Name | barley_pub |
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 153 bits (386), Expect(2) = 6e-39 Identities = 81/108 (75%), Positives = 92/108 (85%), Gaps = 1/108 (0%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSGSLAAMSVFE KY+EGLTR+EGI LVAE+I +GIFNDLGSGSNVD+CVITKGN EYLR Sbjct: 167 GSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLR 226 Query: 356 NHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVAD-GDAMEE 216 N+ PNPRT+VSSKGYSF K TEVL TKIT L + E+ + G+AMEE Sbjct: 227 NYMEPNPRTYVSSKGYSFTK-KTEVLLTKITPLLERVEITEVGEAMEE 273 Score = 27.3 bits (59), Expect(2) = 6e-39 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 577 PHGSTDTLPFCHDG 536 PHGSTDTLPF G Sbjct: 154 PHGSTDTLPFATMG 167
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 152 bits (383), Expect(2) = 1e-38 Identities = 81/109 (74%), Positives = 92/109 (84%), Gaps = 2/109 (1%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSGSLAAMSVFE KY+EGLTR+EGI LVAEAI +GIFNDLGSGSNVD+CVITKG+ EYLR Sbjct: 167 GSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKGHKEYLR 226 Query: 356 NHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVAD--GDAMEE 216 N+ PNPRT+VSSKGYSF K TEVL TKIT L + E+ + G+AMEE Sbjct: 227 NYMEPNPRTYVSSKGYSFTK-KTEVLLTKITPLLERVEIVEVAGEAMEE 274 Score = 27.3 bits (59), Expect(2) = 1e-38 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 Query: 577 PHGSTDTLPFCHDG 536 PHGSTDTLPF G Sbjct: 154 PHGSTDTLPFATMG 167
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 97.1 bits (240), Expect = 3e-20 Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 2/112 (1%) Frame = -1 Query: 578 SAWLHRYSSLLP--RWGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGS 405 S + H + LP GSGSLAAM+VFE K+R + EE LV+EAI AGIFNDLGSGS Sbjct: 155 SIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGS 214 Query: 404 NVDVCVITKGNTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 249 N+D+CVI+K ++LR + +PN + + Y KG T VL+ K+T L+L+ Sbjct: 215 NIDLCVISKSKLDFLRPYSVPNKKGTRFGR-YRCEKGTTAVLTEKVTPLELE 265
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 95.9 bits (237), Expect = 7e-20 Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 2/112 (1%) Frame = -1 Query: 578 SAWLHRYSSLLP--RWGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGS 405 S + H + LP GSGSLAAM+VFE K+R + EE LV+EAI AGIFNDLGSGS Sbjct: 155 SIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGS 214 Query: 404 NVDVCVITKGNTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 249 N+D+CVI+K ++LR + +PN + + Y KG T VL+ KIT L+++ Sbjct: 215 NIDLCVISKNKLDFLRPYTVPNKKGTRLGR-YRCEKGTTAVLTEKITPLEIE 265
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 95.1 bits (235), Expect = 1e-19 Identities = 54/112 (48%), Positives = 73/112 (65%), Gaps = 2/112 (1%) Frame = -1 Query: 578 SAWLHRYSSLLP--RWGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGS 405 S + H + LP GSGSLAAM+VFE K+R + EE LV+EAI AGIFNDLGSGS Sbjct: 155 SIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGS 214 Query: 404 NVDVCVITKGNTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 249 N+D+CVI+K ++LR +PN + + Y KG T VL+ K+T L+++ Sbjct: 215 NIDLCVISKSKLDFLRPFSVPNKKGTRLGR-YRCEKGTTAVLTEKVTPLEIE 265
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 93.2 bits (230), Expect = 5e-19 Identities = 51/94 (54%), Positives = 65/94 (69%), Gaps = 1/94 (1%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG-NTEYL 360 GSGSLAAM+V E +++ LT+EE I L ++AI+AGI+NDLGSGSNVDVCV+ G + EYL Sbjct: 157 GSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYL 216 Query: 359 RNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQL 258 RN+ PN R K Y F +G T VL I + Sbjct: 217 RNYLTPNVRE-EKQKSYKFPRGTTAVLKESIVNI 249
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 83.6 bits (205), Expect = 4e-16 Identities = 51/102 (50%), Positives = 61/102 (59%), Gaps = 2/102 (1%) Frame = -1 Query: 566 HRYSSLLP--RWGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDV 393 H S LP GSGSLAA+SV E KY+ L R E + LV EAI AGIFNDLGSGSN D+ Sbjct: 151 HGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDL 210 Query: 392 CVITKGNTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKI 267 VI + R + PN R SK Y++++G T VL I Sbjct: 211 VVIDEEKATPYRGYSKPNERATKQSK-YTYDRGTTAVLKEDI 251
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 69.3 bits (168), Expect = 7e-12 Identities = 45/107 (42%), Positives = 58/107 (54%), Gaps = 1/107 (0%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG AA++V E +++ +T E L+ EA+ AGI DLGSG NVD CVITK + LR Sbjct: 167 GSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLR 226 Query: 356 NHELPNPRTFVSSKG-YSFNKGHTEVLSTKITQLKLKPEVADGDAME 219 L +P V G Y F G T VL+ + L L+ AME Sbjct: 227 T--LSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAME 271
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 66.2 bits (160), Expect = 6e-11 Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 1/107 (0%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG AA+++ E +++ +T E L+ EAI AGI +DLGSG NVD CVIT G + R Sbjct: 167 GSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQR 226 Query: 356 NHELPNPRTFVSSKG-YSFNKGHTEVLSTKITQLKLKPEVADGDAME 219 L P V G Y F G T VL+ ++ L L+ AME Sbjct: 227 --ALSTPTEPVQRAGRYRFAPGTTPVLTREVRPLTLELLEETVQAME 271
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 49.7 bits (117), Expect = 6e-06 Identities = 29/72 (40%), Positives = 39/72 (54%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSGS A V E +YRE +T +EG+ L AI D SG N+DV VITK + L Sbjct: 139 GSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRLD 198 Query: 356 NHELPNPRTFVS 321 E+ + R ++ Sbjct: 199 PEEVKSRRALLN 210
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/64 (40%), Positives = 36/64 (56%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG A S+ + +Y++ LT EEGI L +AI I D+ SG + V ITK + L Sbjct: 138 GSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEGYKELS 197 Query: 356 NHEL 345 + EL Sbjct: 198 DSEL 201
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/64 (40%), Positives = 33/64 (51%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG A SV + +YRE L EGI + EAI + I D+ SG + V IT+ L Sbjct: 138 GSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEGYRELS 197 Query: 356 NHEL 345 N L Sbjct: 198 NSRL 201
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 43.5 bits (101), Expect = 4e-04 Identities = 24/53 (45%), Positives = 30/53 (56%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITK 378 GSGS V E +Y E +T +EG+ LV AI A D SG +DV VIT+ Sbjct: 136 GSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 188
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 43.1 bits (100), Expect = 6e-04 Identities = 22/64 (34%), Positives = 34/64 (53%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSGS A V E Y ++ EEGI L A+++ + D SG+ + + VITK + Sbjct: 137 GSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVKIFE 196 Query: 356 NHEL 345 + E+ Sbjct: 197 DEEI 200
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/64 (35%), Positives = 34/64 (53%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG A S+ + +YRE ++ +GI L +AI I D+ +G + V ITK + R Sbjct: 138 GSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYR 197 Query: 356 NHEL 345 EL Sbjct: 198 GAEL 201
>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) (20S proteasome alpha subunit) Length = 261 Score = 38.5 bits (88), Expect = 0.014 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEY 363 GSG M + E +YR+ +T +EG+ L A+ N+ NVDVC+IT + ++ Sbjct: 167 GSGRPVVMELLEKEYRDDITLDEGLELAITALTKA--NEDIKPENVDVCIITVKDAQF 222
>PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 37.7 bits (86), Expect = 0.024 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 381 GSG AM++FE KYR+ + E+ I L A+ + N S N++V VIT Sbjct: 167 GSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENP--SADNIEVAVIT 216
>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/52 (40%), Positives = 31/52 (59%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 381 GSG AM++FE KYR+ +T +E I L A+ + + S N++V VIT Sbjct: 167 GSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTM--EKPSAENIEVAVIT 216
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 35.8 bits (81), Expect = 0.091 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 381 GSG AM++FE KY++ ++ EE I L A+ + + S N++V +IT Sbjct: 167 GSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM--EKPSAENIEVAIIT 216
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/53 (37%), Positives = 26/53 (49%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITK 378 GSGS F+ ++EG+T+EE LV A+ I D SG V I K Sbjct: 142 GSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINK 194
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTE 366 GSGS + YREG+T+EE + A A+ + D SG + + I + E Sbjct: 163 GSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVE 219
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)| (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2) (Multicatalytic endopeptidase complex subunit PRE2) Length = 287 Score = 34.7 bits (78), Expect = 0.20 Identities = 23/79 (29%), Positives = 37/79 (46%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG A V + Y+ L+ E+ + L +I A D SG +V++ +T+ Y Sbjct: 205 GSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHG 264 Query: 356 NHELPNPRTFVSSKGYSFN 300 NH++ V + SFN Sbjct: 265 NHDVGELFWKVKEEEGSFN 283
>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) (Proteasome chain 5) Length = 238 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTE 366 GSGS + YREG+T++E + A A+ + D SG + + I + E Sbjct: 162 GSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQQSGVE 218
>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 238 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTE 366 GSGS + YREG+T++E + A A+ + D SG + + I + E Sbjct: 162 GSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVE 218
>UBP4_YEAST (P32571) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Vacuole biogenesis protein SSV7) Length = 926 Score = 33.5 bits (75), Expect = 0.45 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Frame = +1 Query: 133 SRTSTEKKEEMAQILSMTACLNVSTQDHSSIASPSATSGFSFSCVIFVDNTSVCPLLKLY 312 SRT+T K + Q +SM LN+++ HSS S S S S +D+T V P + Sbjct: 498 SRTATPKLQRFPQTISMN--LNMNSNGHSSATSTIQPSCLSLSNNDSLDHTDVTP-TSSH 554 Query: 313 PFELTKVLG---FGNSWFLKYSVFPLVITQTSTLLPLPKS 423 ++L +G GNS ++ + ++ T T + L S Sbjct: 555 NYDLDFAVGLENLGNSCYMNCIIQCILGTHELTQIFLDDS 594
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 33.5 bits (75), Expect = 0.45 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTE 366 GSGS + +RE +T+EE + + A+ + D SG + + ++ K E Sbjct: 153 GSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGME 209
>PSA4_ORYSA (Q9LE92) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) Length = 250 Score = 33.5 bits (75), Expect = 0.45 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAI 441 G+ S AA S+ + YR+G+TREE +AL + + Sbjct: 165 GANSQAAQSMLKQDYRDGMTREEAVALALKVL 196
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 32.7 bits (73), Expect = 0.77 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITK 378 G G A+ VFE +YRE +T +E I L A+ + + N+++ V+ K Sbjct: 168 GEGRQEALDVFEEEYREDMTLQEAIELAVRALYEASREET-TADNLEIAVVDK 219
>PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 233 Score = 32.7 bits (73), Expect = 0.77 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGI 429 GSG A +S E +Y+EGL+ +E + L +A++A + Sbjct: 166 GSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASL 201
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 32.3 bits (72), Expect = 1.0 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVI 384 GSGS F+ +++ +T+EE LV +A+ I D SG V +I Sbjct: 141 GSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVII 191
>GPDA_HAEDU (Q7VNA0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 336 Score = 32.3 bits (72), Expect = 1.0 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLRNHEL--PNPRTFVSSKG 312 AI AGI + +G G+N +IT+G E R E NP+TF+ G Sbjct: 200 AIGAGISDGMGFGANARTALITRGLAEISRLGESLGANPKTFMGMAG 246
>MNTH2_PSEAE (Q9RPF2) Manganese transport protein mntH2| Length = 438 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = +1 Query: 406 LPLPKSLKIPARIASATSAIPSSLVRPSLYFNSNTDIAARDPEPHRGKREEYRWSHA 576 LP P+ L PA + A + ++++ +LY +S+ + P GKR+ RW+ A Sbjct: 201 LPSPRVLSDPAALYLAIGIVGATVMPHNLYLHSSLVQSRAYPRSLAGKRKALRWAVA 257
>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)| (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) Length = 215 Score = 30.0 bits (66), Expect = 5.0 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYL 360 GSGS + +RE +++EE + + ++ I D SG + + V+T E L Sbjct: 147 GSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERL 205
>CSPG2_MOUSE (Q62059) Versican core protein precursor (Large fibroblast| proteoglycan) (Chondroitin sulfate proteoglycan core protein 2) (PG-M) Length = 3358 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = +1 Query: 394 TSTLLPLPKS--------LKIPARIASATSAIPSSLVRPSLYFNSNT 510 T TL PL S + IPA IA S +PS RP+ +NSN+ Sbjct: 1634 TDTLSPLDMSKIMITNHHIYIPATIAPLDSKLPSPDARPTTVWNSNS 1680
>GPD_ASHGO (Q759G5) Glycerol-3-phosphate dehydrogenase [NAD+] (EC 1.1.1.8)| Length = 424 Score = 29.6 bits (65), Expect = 6.5 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 11/61 (18%) Frame = -1 Query: 368 EYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQ-----------LKLKPEVADGDAM 222 E L+ H P R KG+S K ++LST I + L PEVA G+ Sbjct: 173 EQLKGHVKPGARAISCLKGFSVGKDGVQLLSTYIEEHLHIPCGALSGANLAPEVAKGNWS 232 Query: 221 E 219 E Sbjct: 233 E 233
>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 29.6 bits (65), Expect = 6.5 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTE 366 GSGS + +YR G+T+EE V + + D SG + I + +T+ Sbjct: 146 GSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTIDEHSTD 202
>PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 259 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAI 441 GSG AM V E KY E +T EG+ L A+ Sbjct: 168 GSGRPIAMEVLESKYDENMTVSEGMELALYAL 199
>GPDA_GLOVI (Q7NF59) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 305 Score = 29.3 bits (64), Expect = 8.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 AI AG+ + LG G+N +IT+G E +R Sbjct: 166 AIAAGVSDGLGLGANAKAALITRGLAEMIR 195
>GPDA_BACHK (Q6HL50) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 312 A+ AGI + LG G N ++T+G TE R NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACCZ (Q63DM7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 312 A+ AGI + LG G N ++T+G TE R NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACCR (Q81FR4) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 312 A+ AGI + LG G N ++T+G TE R NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACC1 (P61737) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 312 A+ AGI + LG G N ++T+G TE R NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACAN (Q81SW8) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 312 A+ AGI + LG G N ++T+G TE R NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>APCE_CYACA (Q9TLS6) Phycobilisome linker polypeptide (Anchor polypeptide)| (PBS-anchor protein) Length = 870 Score = 29.3 bits (64), Expect = 8.5 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 12/98 (12%) Frame = +1 Query: 205 TQDHSSIASPSATSGFSFSCVI--FVDNTSVCPLLKLYPFELTKVLGFGNS--------- 351 T D +S S +T G + F +TS P F+ V+ +G+S Sbjct: 95 TSDQASSTSIQSTKGLGNGNIFQNFFKSTSEAPT----GFKPINVVRYGSSNMKKSIRDL 150 Query: 352 -WFLKYSVFPLVITQTSTLLPLPKSLKIPARIASATSA 462 WFL+Y + +V TS L+ K L+ A ++SA Sbjct: 151 DWFLRYVTYAIVAGDTSILIVNTKGLRELIDKACSSSA 188
>PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG AM++FE YR+ + +++ I L A+ + G V + + + L Sbjct: 167 GSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLP 226 Query: 356 NHEL 345 EL Sbjct: 227 REEL 230
>PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -1 Query: 536 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 GSG AM++FE YR+ + +++ I L A+ + G V + + + L Sbjct: 167 GSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLP 226 Query: 356 NHEL 345 EL Sbjct: 227 REEL 230
>SRB15_CAEEL (O01509) Serpentine receptor class beta-15 (Protein srb-15)| Length = 336 Score = 29.3 bits (64), Expect = 8.5 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 16/86 (18%) Frame = +1 Query: 268 IFVDNTSVCPLLKLYPFELTKVLGFGNSWFL---------KYSVFPLVITQTSTLLPL-- 414 +FV +S+ PL+ F+L K GN FL +SV +I+ T L+PL Sbjct: 28 LFVSISSIIPLIYFVIFKLPKTSFHGNLKFLFSAYFVSVFLFSVDFAIISTTEILIPLFS 87 Query: 415 --PKSLKIP---ARIASATSAIPSSL 477 P +L IP +I + T +I SL Sbjct: 88 KHPCNLLIPDQYLKIGNTTVSIFMSL 113
>GPDA_METCA (Q604K1) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 335 Score = 29.3 bits (64), Expect = 8.5 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 446 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR 357 AI AGI + LG G+N +IT+G E +R Sbjct: 196 AIAAGISDGLGFGANARAALITRGLAEMMR 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,753,972 Number of Sequences: 219361 Number of extensions: 1679496 Number of successful extensions: 4739 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4625 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4732 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
