Clone Name | rbasd0h03 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I | 53 | 6e-07 | 2 | YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1) | 42 | 0.001 | 3 | BOI2_YEAST (P39969) Protein BOI2 (Protein BEB1) | 29 | 8.7 | 4 | ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing prote... | 29 | 8.7 |
---|
>YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I| Length = 81 Score = 53.1 bits (126), Expect = 6e-07 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Frame = -3 Query: 456 NSLAILNEDRFLGPRGWSMSEVSGNGQTK-SLKGQIVGLIYATQ-FLRMPLIALNVLIIV 283 N++AIL+EDRFLG GWS S G G + ++K +I+ LI A + + PLIA+N ++IV Sbjct: 16 NAVAILSEDRFLGRIGWSQSAALGFGDRQDTIKSRILHLIRAIRTVMTFPLIAINTIVIV 75 Query: 282 VKMVSG 265 +V G Sbjct: 76 YNLVLG 81
>YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1)| Length = 85 Score = 42.4 bits (98), Expect = 0.001 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Frame = -3 Query: 456 NSLAILNEDRFLGPRGWSMSE----VSGNGQTKSLKGQIVGLIYATQ-FLRMPLIALNVL 292 N++A+L+E+RFL G S V G Q + K ++V LI A Q LR+PLI +N+L Sbjct: 18 NAVAVLSEERFLRRIGLGRSNDETPVFGQDQNTT-KSKVVQLIGAVQTLLRIPLIGINIL 76 Query: 291 IIVVKMVSG 265 +IV +++ G Sbjct: 77 VIVYELLLG 85
>BOI2_YEAST (P39969) Protein BOI2 (Protein BEB1)| Length = 1040 Score = 29.3 bits (64), Expect = 8.7 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = +1 Query: 205 HNAGN*NQINPTAETRERASA*HHFHNNDKNIKRYQGHPQKLSGIDEPHDLPLQRLCLPI 384 +NA NQ+ P A +RAS Y+GH +K S DLP Q+ +P Sbjct: 345 NNANIYNQLMPPANVDQRAS--------------YRGHVRKTS--QSLEDLPSQQNFIPT 388 Query: 385 S*NFRHAPSPGTKKAVFIQDSQ 450 N R++ + + + DSQ Sbjct: 389 PRNTRNSSASKHRPKSLVFDSQ 410
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 29.3 bits (64), Expect = 8.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 Query: 451 RICKKQKTLQQHPQAHLSDRPRGVP 525 ++CK L +H Q H ++RP G P Sbjct: 772 KVCKTAAALSRHGQRHAAERPGGTP 796 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,304,475 Number of Sequences: 219361 Number of extensions: 1819401 Number of successful extensions: 5045 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4882 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5040 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)