ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACY1_PIG (P37111) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-a... 65 3e-11
2ACY1_HUMAN (Q03154) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino... 64 7e-11
3TES_CALJA (Q2QLG8) Testin 31 0.63
4BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 28 5.3
5Z3H7A_HUMAN (Q8IWR0) Zinc finger CCCH-type domain-containing pro... 28 5.3
6Y376_MYCPN (P75405) Hypothetical protein MPN376 (A19_orf1140) 27 9.1

>ACY1_PIG (P37111) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid|
           amidohydrolase) (ACY-1)
          Length = 406

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -3

Query: 385 ARYFREIGIPAXGFSPMANTPVLLHDHNEFLSKDEYLKGIGIYESIIKALAT 230
           ARY R  G+PA GFSPM +TPVLLHDH+E L +  +L+G+ IY  ++ ALA+
Sbjct: 347 ARYIRAAGVPALGFSPMNHTPVLLHDHDERLHEAVFLRGVDIYTQLLSALAS 398



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>ACY1_HUMAN (Q03154) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid|
           amidohydrolase) (ACY-1)
          Length = 408

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = -3

Query: 382 RYFREIGIPAXGFSPMANTPVLLHDHNEFLSKDEYLKGIGIYESIIKALAT 230
           RY R +G+PA GFSPM  TPVLLHDH+E L +  +L+G+ IY  ++ ALA+
Sbjct: 350 RYIRAVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALAS 400



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>TES_CALJA (Q2QLG8) Testin|
          Length = 421

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
 Frame = +2

Query: 191 LCPRLLVDAVIFVCGQCLYNGLIYXNS-------FEVLIFAQELVMIMKQYWCVRH 337
           +C  LLVD + F   + LY G  Y +S        + LIF+ E     KQ W ++H
Sbjct: 270 ICHELLVDMIYFWKNEKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAEKQSWHLKH 325



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>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 146  LLTFSANTCSVSAPAAKAKP 87
            ++ ++ANTCS   PA KAKP
Sbjct: 1286 VMKWNANTCSCECPADKAKP 1305



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>Z3H7A_HUMAN (Q8IWR0) Zinc finger CCCH-type domain-containing protein 7A|
          Length = 971

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 179 LSSQLCPRLLVDAVIFVCGQCLYNGLI 259
           L +Q+ P  L   + FVC QCL NG +
Sbjct: 695 LGNQIMPGFLNMKIKFVCAQCLRNGQV 721



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>Y376_MYCPN (P75405) Hypothetical protein MPN376 (A19_orf1140)|
          Length = 1140

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 316 LHDHNEFLSKD--EYLKGIGIYESIIKALATHKDDGI 212
           L+D  E   KD   YLK  GI E+ IK  A HK D +
Sbjct: 676 LNDERERFQKDINNYLKVQGISETEIKVNAVHKVDAM 712


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,263,046
Number of Sequences: 219361
Number of extensions: 989284
Number of successful extensions: 2467
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2467
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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