ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0h01 |
|---|---|
| Clone Library Name | barley_pub |
>YHG9_YEAST (P38758) Uncharacterized protein YHR009C| Length = 523 Score = 62.4 bits (150), Expect = 7e-10 Identities = 30/68 (44%), Positives = 43/68 (63%) Frame = -1 Query: 435 PATSPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAP 256 P + T G P+IGE VK Y+A+GHSCWGI NAP TG +AE++LDG+A +++ Sbjct: 453 PVLNVPTSSG-PLIGET-NVKDLYIASGHSCWGINNAPATGKLMAEILLDGEATSAEISS 510 Query: 255 FSPARFLN 232 P + + Sbjct: 511 LDPKLYFD 518
>YURR_BACSU (O32159) Hypothetical oxidoreductase yurR (EC 1.-.-.-)| Length = 372 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/60 (43%), Positives = 36/60 (60%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T LPV+G +P V+G Y A G G+ P GA LA+L+L Q ++ DL+P+ PA Sbjct: 310 PFTPGFLPVVGAVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQTEL-DLSPYDPA 368
>Y4548_PSEAE (P33642) Probable D-amino acid oxidase PA4548| Length = 364 Score = 48.9 bits (115), Expect = 8e-06 Identities = 24/60 (40%), Positives = 39/60 (65%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P + +G+P IG +PG G ++ TGH G++ AP + LA+L + G+ I+D AP++PA Sbjct: 303 PGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADL-MSGREPIIDPAPYAPA 361
>YAM3_SCHPO (Q10058) Hypothetical protein C1F5.03c in chromosome I| Length = 382 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/54 (44%), Positives = 29/54 (53%) Frame = -1 Query: 408 GLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSP 247 G PVIG++ YVA H CWGI P TG L+ELILDG ++ P Sbjct: 326 GAPVIGKIGS--SIYVAAAHGCWGITLGPGTGKVLSELILDGAVTSANIDLLDP 377
>GLOX_BACSU (O31616) Glycine oxidase (EC 1.4.3.19)| Length = 369 Score = 39.3 bits (90), Expect = 0.006 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILD 286 P T DG P IG P A GH GIL AP TGA +++LI++ Sbjct: 303 PGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 348
>THIG_SYNY3 (Q55710) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 656 Score = 39.3 bits (90), Expect = 0.006 Identities = 26/63 (41%), Positives = 35/63 (55%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T D P +G P +A GH GIL AP+T A +++LILD + + + FSP Sbjct: 299 PGTPDEQPFLGYGP-CDNLILAIGHYRNGILLAPITAALISDLILDQKVSPL-IHAFSPQ 356 Query: 243 RFL 235 RFL Sbjct: 357 RFL 359
>THIG_ANASP (Q8YRC9) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 652 Score = 36.6 bits (83), Expect = 0.039 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILD 286 P T D LP++G +ATGH GIL AP+T A +A+LI++ Sbjct: 302 PATPDELPILGTSH-CPNLTLATGHYRNGILLAPITAALIADLIVE 346
>DADA1_RALSO (Q8Y0W7) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)| Length = 429 Score = 36.6 bits (83), Expect = 0.039 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG P++G P V+G ++ TGH G A +G L++L+ G++ + S Sbjct: 356 PMTPDGTPIVGPTP-VRGLWINTGHGTLGWTMACGSGQLLSDLV-SGRSPAIRADDLSVY 413 Query: 243 RFL 235 R+L Sbjct: 414 RYL 416
>MTOX_SALTY (P58525) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 36.2 bits (82), Expect = 0.051 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 420 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 253 CT D P +I +PG + V TG S G APV G A+ L G+ DL PF Sbjct: 307 CTYDNSPDEDFIIDTLPGHENTLVITGLSGHGFKFAPVLGEIAADFAL-GKTPSFDLTPF 365 Query: 252 SPARF 238 +RF Sbjct: 366 RLSRF 370
>MTOX_SALTI (P58524) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 36.2 bits (82), Expect = 0.051 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 420 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 253 CT D P +I +PG + V TG S G APV G A+ L G+ DL PF Sbjct: 307 CTYDNSPDEDFIIDTLPGHENTLVITGLSGHGFKFAPVLGEIAADFAL-GKTPSFDLTPF 365 Query: 252 SPARF 238 +RF Sbjct: 366 RLSRF 370
>DADA_YERPE (Q8ZEL7) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 434 Score = 36.2 bits (82), Expect = 0.051 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIV 268 P T DG P++G P +K Y+ TGH G A +G LA++I + IV Sbjct: 356 PMTPDGTPIVGRTP-LKNLYLNTGHGTLGWTMACGSGQLLADIIQGRRPAIV 406
>M2GD_MOUSE (Q9DBT9) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 869 Score = 35.8 bits (81), Expect = 0.066 Identities = 22/58 (37%), Positives = 33/58 (56%) Frame = -1 Query: 411 DGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPARF 238 D LP++G GV+ +VATG +GI++A G L++ IL G+ DL P R+ Sbjct: 370 DILPMVGPHQGVRNYWVATGFG-YGIIHAGGVGKFLSDWILHGEPPF-DLIELDPNRY 425
>DADA_XANCP (Q8P4Q9) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 429 Score = 35.8 bits (81), Expect = 0.066 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G P ++ TGH G A +G LA+L + G+ +D Sbjct: 357 PATPDGTPVVGATP-YANLFLNTGHGTLGWTMACGSGRYLADL-MQGRTPEIDTEGLDVF 414 Query: 243 RFLNNKKSR 217 R+L+ + +R Sbjct: 415 RYLSTRSTR 423
>DADA2_RALSO (Q8XX54) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)| Length = 425 Score = 35.0 bits (79), Expect = 0.11 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T G+PV+G P V G ++ GH G A + LA+LI +A + AP++ A Sbjct: 367 PATPTGVPVVGPSP-VDGLWLNVGHGALGFTLAMGSAGLLADLIA-RRAPAIAAAPYALA 424 Query: 243 R 241 R Sbjct: 425 R 425
>DADA_XYLFT (Q87AK0) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 435 Score = 34.7 bits (78), Expect = 0.15 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 292 P T DG PVIG P +G ++ TGH G + +G LA+LI Sbjct: 357 PATPDGTPVIGATP-YQGLFLNTGHGTLGWTMSSGSGRYLADLI 399
>DADA_XYLFA (Q9PF27) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 435 Score = 34.7 bits (78), Expect = 0.15 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 292 P T DG PVIG P +G ++ TGH G + +G LA+LI Sbjct: 357 PATPDGTPVIGATP-YQGLFLNTGHGTLGWTMSSGSGRYLADLI 399
>DADA_XANAC (Q8PGC9) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 429 Score = 33.9 bits (76), Expect = 0.25 Identities = 22/69 (31%), Positives = 33/69 (47%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G P ++ TGH G A +G LA+L + G+ +D Sbjct: 357 PATPDGTPVVGATP-YANLFLNTGHGTLGWTMACGSGRYLADL-MQGRTPEIDTEGLDVF 414 Query: 243 RFLNNKKSR 217 R+L+ + R Sbjct: 415 RYLSPRSVR 423
>M2GD_RAT (Q63342) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 857 Score = 33.5 bits (75), Expect = 0.33 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = -1 Query: 411 DGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPARF 238 D LP++G GV+ +VA G +GI++A G L++ IL G+ DL P R+ Sbjct: 370 DILPMVGPHQGVRNYWVAIGFG-YGIIHAGGVGKYLSDWILHGEPPF-DLIELDPNRY 425
>M2GD_HUMAN (Q9UI17) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 866 Score = 33.5 bits (75), Expect = 0.33 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = -1 Query: 411 DGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPARF 238 D LP++G GV+ +VA G +GI++A G L++ IL G+ DL P R+ Sbjct: 377 DILPMVGPHQGVRNYWVAIGFG-YGIIHAGGVGKYLSDWILHGEPPF-DLIELDPNRY 432
>DADA_PSESM (Q88BB6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 433 Score = 33.1 bits (74), Expect = 0.43 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 292 P T DG P++G P ++ ++ TGH G A +G LA+LI Sbjct: 357 PTTPDGTPIVGATP-LRNLFLNTGHGTLGWTMACGSGRLLADLI 399
>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6| Length = 1177 Score = 32.7 bits (73), Expect = 0.56 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +2 Query: 281 CPSRMSSASAAPVTGALRIPQQLCPVAT*HPFTPGISPMTGSP 409 CP RM S+ ++P G+ ++PQ C HP +PG P G P Sbjct: 466 CPQRMYSSESSPGPGS-KVPQG-CESPVRHPGSPGHHPCVGPP 506
>DADA_VIBCH (Q9KTV1) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 421 Score = 32.3 bits (72), Expect = 0.73 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 271 P T DG P+IG P Y TGH G A + + LA+++ G++ + Sbjct: 358 PMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMACGSASILADVLTHGESPL 407
>Y1942_CHRVO (Q7NWN9) UPF0209 protein CV_1942| Length = 660 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 384 PGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI-VDL-APFSPARFLNNKKSRR 214 P +G YV H G++ AP++G LA L+ A + DL P+RFL RR Sbjct: 595 PWAEGLYVNAAHGSRGLITAPLSGEILASLLEGEPAPLPADLMRAVHPSRFLLRDLIRR 653
>DADA_SHIFL (Q7UCT6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGS-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>DADA_RHILV (Q9RAE6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 416 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 271 P T DG PVIG V G ++ TGH G + + + +L+ GQ +I Sbjct: 356 PMTPDGTPVIGPTK-VAGLFLNTGHGTLGWTMSTGSARLIGDLVGGGQPEI 405
>DADA_ECOLI (P0A6J5) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>DADA_ECOL6 (P0A6J6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>DADA_ECO57 (P0A6J7) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>OOXB1_RHIME (Q92XP5) Opine oxidase subunit B (EC 1.-.-.-) (Octopine oxidase| subunit B) Length = 368 Score = 31.6 bits (70), Expect = 1.2 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 411 DGLPVIGEMPGVKGCYVATGHS--CWGILNAPVTGAALAE 298 DGLP+ E P + G YV T HS L+A G ALAE Sbjct: 312 DGLPIYEEAPEMPGAYVVTCHSGVTLASLHALELGPALAE 351
>Y4SL_RHISN (P55655) Hypothetical protein y4sL| Length = 203 Score = 31.2 bits (69), Expect = 1.6 Identities = 18/62 (29%), Positives = 31/62 (50%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PVIG + G ++ TGH G + + +A+L+ G+ +D + + Sbjct: 143 PMTPDGTPVIGPTK-IAGLFLNTGHGTLGWTMSSGSARVIADLV-SGRKPEIDATDLAVS 200 Query: 243 RF 238 R+ Sbjct: 201 RY 202
>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 367 Score = 31.2 bits (69), Expect = 1.6 Identities = 20/51 (39%), Positives = 24/51 (47%) Frame = +2 Query: 278 ACPSRMSSASAAPVTGALRIPQQLCPVAT*HPFTPGISPMTGSPSSVHGEV 430 A S S ASA GA IPQ VA P P ++P+T P + EV Sbjct: 207 AASSASSLASAGSAEGASGIPQSKGQVAPATPPPPPVAPVTPPPPPLSAEV 257
>DADA_SALTY (Q8ZP17) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.2 bits (69), Expect = 1.6 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G L++ IL G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRYKNLWLNTGHGTLGWTMACGSGQLLSD-ILSGRTPAIPYDDLSVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>DADA_SALTI (Q8Z687) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.2 bits (69), Expect = 1.6 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G L++++L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRYKNLWLNTGHGTLGWTMACGSGQLLSDILL-GRTPAIPYDDLSVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>DADA1_PSEPK (Q88EM0) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)| Length = 432 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI----VDLAP 256 P T DG P++G+ + ++ TGH G + +G LA+L+ + KI +D++ Sbjct: 357 PATPDGTPIVGKTK-YRNLFLNTGHGTLGWTMSCGSGRLLADLMAGKKPKISAKGLDISR 415 Query: 255 FSPARFLNN 229 +S + +N Sbjct: 416 YSNQKEAHN 424
>DADA2_PSEPK (Q88CB1) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)| Length = 434 Score = 30.0 bits (66), Expect = 3.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 292 P T DG P++G + ++ TGH G A +G LA+LI Sbjct: 357 PATPDGTPIVG-ATAFRNLFLNTGHGTLGWTMACGSGRLLADLI 399
>DADA_KLEAE (O30745) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 30.0 bits (66), Expect = 3.6 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 244 P T DG PV+G K ++ TGH G A +G +++LI G+ + + A Sbjct: 356 PMTPDGTPVVGR-TAYKNLWLNTGHGTLGWTMACGSGQLISDLI-SGRTPAIPYDDLAVA 413 Query: 243 RF 238 R+ Sbjct: 414 RY 415
>GCSP_PHOLL (Q7N199) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 958 Score = 29.6 bits (65), Expect = 4.7 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +1 Query: 193 PRITLHSAPALLV--VEKSCRAEGRKINDLGLPIEDELGECCTGNWSIEDPP 342 P ++ A L+V E + E + D L I E+G+ G WS+ED P Sbjct: 844 PTMSFPVAGTLMVEPTESESKVEIDRFVDAMLAIRAEIGKVAKGEWSLEDNP 895
>MURI_DEIRA (Q9RU10) Glutamate racemase (EC 5.1.1.3)| Length = 290 Score = 29.3 bits (64), Expect = 6.2 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 405 LPVIGEMPGVKGCYVATGHSCWGILNAPVT--GAALAELI 292 LP+IG +P VK AT G+L P T G LA++I Sbjct: 104 LPIIGLVPAVKPAVAATKSGVVGVLATPGTLRGTLLADVI 143
>Y3456_PSEAE (Q9HYF0) UPF0209 protein PA3456| Length = 654 Score = 29.3 bits (64), Expect = 6.2 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -1 Query: 384 PGVKGCYVATGHSCWGILNAPVTGAALAELI 292 P + G Y+ +GH G+++AP++G LA I Sbjct: 593 PWLPGLYLNSGHGSRGLISAPLSGELLAAWI 623
>CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-)| Length = 720 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 89 LFIRTLFDLVSPPRTGYKRGYVGVSFYSVAKFGR 190 L+ R L+ +V PP G++ GY GV + + +FGR Sbjct: 116 LYPRLLYRVV-PPGQGFQDGYAGVFHFQLWQFGR 148
>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)| (Cell division cycle 2-like) Length = 952 Score = 29.3 bits (64), Expect = 6.2 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -1 Query: 423 PCTDDGLPVIGEMPGVKGCYVATGHSC 343 PC D G+P+ PGV+GC C Sbjct: 534 PCDDKGIPLPNYYPGVQGCRSVEEFQC 560
>ADIP_HUMAN (Q9Y2D8) Afadin- and alpha-actinin-binding protein (ADIP) (Afadin| DIL domain-interacting protein) (SSX2-interacting protein) Length = 614 Score = 29.3 bits (64), Expect = 6.2 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Frame = +1 Query: 238 KSCRAEGRKINDLGLPIEDEL-----GECCTGNWSIEDPPAAVPGC 360 +SC +E IN L + E+ GEC WS+ P + GC Sbjct: 550 RSCISEHSSINVLNITAEEIKPNQVGGECTNQKWSVASRPGSQEGC 595
>RT03_PROWI (P46740) Mitochondrial ribosomal protein S3| Length = 500 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +1 Query: 91 IYPYII*FGVPSSDRLQARIRRSIFLFGCQVWQEPRITLHSAPALLVVEKSCRAEGRKIN 270 +YP+ F +P + R+ +F + W +S+P V KS + KIN Sbjct: 68 VYPF---FCIPKASRVSLAKNLGLFQHLSKAW-------NSSPKYFVSSKSKQLSQLKIN 117 Query: 271 DLGLPIED 294 D LP+ + Sbjct: 118 DASLPVNN 125
>Y407_MYCPN (P75377) Hypothetical protein MPN407 (F11_orf879)| Length = 879 Score = 28.9 bits (63), Expect = 8.1 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -1 Query: 366 YVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPARFLNNKK 223 + + G+ +G L P T L E+ +D Q ++D+ P + NK+ Sbjct: 758 FASLGYLSFGYLKKPATVVELPEVTVDDQTGVLDIKQSVPPKLKVNKQ 805
>CD5R2_MOUSE (O35926) Cyclin-dependent kinase 5 activator 2 precursor (CDK5| activator 2) (Cyclin-dependent kinase 5 regulatory subunit 2) (P39) (P39I) Length = 369 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +2 Query: 284 PSRMSSASAAPVTGALRIPQQLCPVAT*HPFTPGISPMTGSPSSVHGEVAGLFRDYLC 457 PS S+A+ P +G + P P P PG SP + GE+ RD++C Sbjct: 138 PSGGSAAAPPPGSGGGKPPPPPPPAPQAAPPAPGSSPRRVIVQASTGELLRCLRDFVC 195 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,597,902 Number of Sequences: 219361 Number of extensions: 1710674 Number of successful extensions: 3912 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3908 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
