>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 34       ctcctctccatccacttcctcc 55
                ||||||||||||||||||||||
Sbjct: 23514892 ctcctctccatccacttcctcc 23514913

>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
             sequence
          Length = 144383

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    ctcctctccatccacttcctcc 55
             ||||||||||||||||||||||
Sbjct: 67365 ctcctctccatccacttcctcc 67344

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 34       ctcctctccatccacttcctcc 55
                ||||||||||||||||||||||
Sbjct: 23507920 ctcctctccatccacttcctcc 23507941

>gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosome X, complete sequence
          Length = 212318

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   ttttcagttttgaaattaata 200
             |||||||||||||||||||||
Sbjct: 43730 ttttcagttttgaaattaata 43750

>gb|AC144902.2| Mus musculus BAC clone RP23-400D9 from chromosome 5, complete sequence
          Length = 204858

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     ctcctctccatccacttcctc 54
              |||||||||||||||||||||
Sbjct: 159531 ctcctctccatccacttcctc 159551

>emb|Z92864.1|CEY65A5A Caenorhabditis elegans YAC Y65A5A, complete sequence
          Length = 24905

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 176 taaattttcagttttgaaatt 196
           |||||||||||||||||||||
Sbjct: 832 taaattttcagttttgaaatt 812

>emb|AL035209.1|HS7H11 Human DNA sequence from clone XX-D7H11 on chromosome 1q32.2-32.3
             Contains the 3' end of the MCP gene for membrane cofactor
             protein (CD46, trophoblast-lymphocyte cross-reactive
             antigen) and the 3' end of a novel gene, complete sequence
          Length = 77551

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    catgcctcttctcctctccatccac 48
             ||||||||||||||||| |||||||
Sbjct: 35546 catgcctcttctcctctgcatccac 35522

>dbj|AK125868.1| Homo sapiens cDNA FLJ43880 fis, clone TESTI4009022
          Length = 3526

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 24   catgcctcttctcctctccatccac 48
            ||||||||||||||||| |||||||
Sbjct: 2171 catgcctcttctcctctgcatccac 2147

>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 182489

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    catgcctcttctcctctccatccac 48
             ||||||||||||||||| |||||||
Sbjct: 72956 catgcctcttctcctctgcatccac 72932

>ref|NM_001039568.1| Homo sapiens hypothetical protein LOC148696 (LOC148696), mRNA
          Length = 3526

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 24   catgcctcttctcctctccatccac 48
            ||||||||||||||||| |||||||
Sbjct: 2171 catgcctcttctcctctgcatccac 2147

>gb|AC154458.2| Mus musculus BAC clone RP24-162I9 from chromosome 17, complete sequence
          Length = 183027

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 32     ttctcctctccatccacttcctcct 56
              ||||||||||| |||||||||||||
Sbjct: 120957 ttctcctctccctccacttcctcct 120933

>emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 in linkage group 20,
              complete sequence
          Length = 200617

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    taaattttcagttttgaaatt 196
              |||||||||||||||||||||
Sbjct: 143957 taaattttcagttttgaaatt 143977

>emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 in linkage group 20,
             complete sequence
          Length = 134837

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   taaattttcagttttgaaatt 196
             |||||||||||||||||||||
Sbjct: 34872 taaattttcagttttgaaatt 34892

>emb|AL683827.6| Mouse DNA sequence from clone RP23-473F3 on chromosome X, complete
              sequence
          Length = 181878

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 180    ttttcagttttgaaattaata 200
              |||||||||||||||||||||
Sbjct: 135930 ttttcagttttgaaattaata 135950

>emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on chromosome 2, complete
              sequence
          Length = 237337

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 30     tcttctcctctccatccacttcctccttg 58
              ||||||||||| || ||||||||||||||
Sbjct: 147353 tcttctcctcttcacccacttcctccttg 147325

>gb|AC112361.5| Rattus norvegicus 9 BAC CH230-61F12 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216648

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tttcagttttgaaattaata 200
              ||||||||||||||||||||
Sbjct: 131272 tttcagttttgaaattaata 131253

>ref|XM_419369.1| PREDICTED: Gallus gallus similar to MGC53127 protein (LOC421304),
           mRNA
          Length = 2601

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  cttctcctctccatccactt 50
           ||||||||||||||||||||
Sbjct: 408 cttctcctctccatccactt 389

>gb|AC127554.4| Mus musculus BAC clone RP24-323K23 from chromosome 8, complete sequence
          Length = 178416

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 28    cctcttctcctctccatccacttcctcc 55
             |||||||||||||| |||||||||||||
Sbjct: 73213 cctcttctcctctc-atccacttcctcc 73239

>gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, complete sequence
          Length = 246033

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 178   aattttcagttttgaaattaatat 201
             |||||| |||||||||||||||||
Sbjct: 15436 aatttttagttttgaaattaatat 15413

>emb|BX469922.12| Zebrafish DNA sequence from clone DKEY-30N5 in linkage group 24, complete
              sequence
          Length = 200409

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ttcagttttgaaattaatat 201
              ||||||||||||||||||||
Sbjct: 181034 ttcagttttgaaattaatat 181015

>gb|BC079199.1| Rattus norvegicus hypothetical protein LOC500825, mRNA (cDNA clone
            MGC:94252 IMAGE:7131579), complete cds
          Length = 1759

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   ctctccatccacttcctcct 56
            ||||||||||||||||||||
Sbjct: 1298 ctctccatccacttcctcct 1279

>gb|AC138527.22| Medicago truncatula clone mth2-10a20, complete sequence
          Length = 115023

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cagtaaattttcagttttga 192
             ||||||||||||||||||||
Sbjct: 82046 cagtaaattttcagttttga 82065

>ref|NM_001025052.1| Rattus norvegicus hypothetical protein LOC500825 (LOC500825), mRNA
          Length = 1759

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   ctctccatccacttcctcct 56
            ||||||||||||||||||||
Sbjct: 1298 ctctccatccacttcctcct 1279

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 174      agtaaattttcagttttgaa 193
                ||||||||||||||||||||
Sbjct: 27845951 agtaaattttcagttttgaa 27845932

>emb|BX324215.14| Zebrafish DNA sequence from clone DKEY-42L16 in linkage group 22,
             complete sequence
          Length = 207877

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   attttcagttttgaaattaa 198
             ||||||||||||||||||||
Sbjct: 73968 attttcagttttgaaattaa 73987

>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete
              sequence
          Length = 358943

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    aattttcagttttgaaatta 197
              ||||||||||||||||||||
Sbjct: 126617 aattttcagttttgaaatta 126598

>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710B08
          Length = 186991

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    agtaaattttcagttttgaa 193
              ||||||||||||||||||||
Sbjct: 148460 agtaaattttcagttttgaa 148441

>emb|BX005290.10| Zebrafish DNA sequence from clone CH211-127M10 in linkage group 6,
             complete sequence
          Length = 186793

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    cctcttctcctctccatccacttc 51
             ||||||||||||||| ||||||||
Sbjct: 65203 cctcttctcctctccttccacttc 65180

>dbj|AK109845.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E09, full
            insert sequence
          Length = 1906

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  agtaaattttcagttttgaa 193
            ||||||||||||||||||||
Sbjct: 1382 agtaaattttcagttttgaa 1401

>emb|AL831726.11| Zebrafish DNA sequence from clone DKEY-49N23 in linkage group 22,
              complete sequence
          Length = 245697

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    attttcagttttgaaattaa 198
              ||||||||||||||||||||
Sbjct: 191809 attttcagttttgaaattaa 191828

>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome II, complete sequence
          Length = 350181

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    aattttcagttttgaaatta 197
              ||||||||||||||||||||
Sbjct: 124798 aattttcagttttgaaatta 124779


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,002,055
Number of Sequences: 3902068
Number of extensions: 2002055
Number of successful extensions: 163663
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 163388
Number of HSP's gapped (non-prelim): 275
length of query: 208
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 186
effective length of database: 17,147,199,772
effective search space: 3189379157592
effective search space used: 3189379157592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)