>THIO_SHIFL (P0AA30) Thioredoxin 1 (TRX1) (TRX)|
          Length = 108

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 521 KVIDEYDEYVHFVXXXXXXXXXXXXXAGIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFI 342
           ++ DEY   +                 GI G P +  FKN E+  T  G   K + +EF+
Sbjct: 44  EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103

Query: 341 ESN 333
           ++N
Sbjct: 104 DAN 106

>THIO_SALTY (P0AA28) Thioredoxin 1 (TRX1) (TRX)|
          Length = 108

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 521 KVIDEYDEYVHFVXXXXXXXXXXXXXAGIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFI 342
           ++ DEY   +                 GI G P +  FKN E+  T  G   K + +EF+
Sbjct: 44  EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103

Query: 341 ESN 333
           ++N
Sbjct: 104 DAN 106

>THIO_SALTI (P0AA29) Thioredoxin 1 (TRX1) (TRX)|
          Length = 108

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 521 KVIDEYDEYVHFVXXXXXXXXXXXXXAGIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFI 342
           ++ DEY   +                 GI G P +  FKN E+  T  G   K + +EF+
Sbjct: 44  EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103

Query: 341 ESN 333
           ++N
Sbjct: 104 DAN 106

>THIO_ECOLI (P0AA25) Thioredoxin 1 (TRX1) (TRX)|
          Length = 108

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 521 KVIDEYDEYVHFVXXXXXXXXXXXXXAGIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFI 342
           ++ DEY   +                 GI G P +  FKN E+  T  G   K + +EF+
Sbjct: 44  EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103

Query: 341 ESN 333
           ++N
Sbjct: 104 DAN 106

>THIO_ECOL6 (P0AA26) Thioredoxin 1 (TRX1) (TRX)|
          Length = 108

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 521 KVIDEYDEYVHFVXXXXXXXXXXXXXAGIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFI 342
           ++ DEY   +                 GI G P +  FKN E+  T  G   K + +EF+
Sbjct: 44  EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103

Query: 341 ESN 333
           ++N
Sbjct: 104 DAN 106

>THIO_ECO57 (P0AA27) Thioredoxin 1 (TRX1) (TRX)|
          Length = 108

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 521 KVIDEYDEYVHFVXXXXXXXXXXXXXAGIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFI 342
           ++ DEY   +                 GI G P +  FKN E+  T  G   K + +EF+
Sbjct: 44  EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103

Query: 341 ESN 333
           ++N
Sbjct: 104 DAN 106

>PPCK_SULTO (Q972S7) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 602

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 289 LHFKTLGQTMSSDHLFDSMNSRYSFFIFTPEKVLIIS 399
           L  KTLG T+  DH  D   +R   FI T +K+  ++
Sbjct: 70  LPLKTLGHTIHFDHPLDQARARDDTFILTDDKIPFVN 106

>THIO2_CAEEL (Q17424) Probable thioredoxin B0024.9|
          Length = 119

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 440 GIMGTPCVQFFKNKEMIRTFSGVKMKKEYREFIE 339
           GI   P V  FKN E I  FSGV   ++  +FIE
Sbjct: 81  GISAVPTVFAFKNGEKISGFSGVLDDEQLDDFIE 114

>THEX1_HUMAN (Q8IV48) 3' histone mRNA exonuclease 1 (EC 3.1.-.-) (3'-5'|
           exonuclease ERI1) (Eri-1 homolog) (Histone mRNA 3'
           end-specific exoribonuclease) (Protein 3'hExo) (HEXO)
          Length = 348

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +3

Query: 345 EFPVFLLHLHTRESPDHF--FVFKELNTRCSHDAC 443
           EFPV LL+ HT E  D F  +V  E+NT+ S D C
Sbjct: 152 EFPVVLLNTHTLEIEDTFQQYVRPEINTQLS-DFC 185

>L_MABVM (P31352) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2331

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
 Frame = +2

Query: 134  YIVQQRIYFGFNKGDRLISYGMTA--------PGSSENLTKNCPPA 247
            YIV        N   RLI+YG TA        P S +NL +NC P+
Sbjct: 1707 YIVYPENITEINARTRLINYGSTALQGMDTKMPLSEQNLVENCRPS 1752


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,863,019
Number of Sequences: 219361
Number of extensions: 1556359
Number of successful extensions: 3265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3263
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)