ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd0g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BCHG_CHLAU (P33326) Bacteriochlorophyll synthase 34 kDa chain 30 6.0

>BCHG_CHLAU (P33326) Bacteriochlorophyll synthase 34 kDa chain|
          Length = 310

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 464 SWFHPGQEFRCWHISSVAPGWTQEIGIMHQSLALGM 571
           +WF P   F C  I+S A GW + IG     L LGM
Sbjct: 40  TWFAPTWAFMCGAIASGALGWNESIG----RLLLGM 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,639,241
Number of Sequences: 219361
Number of extensions: 2577643
Number of successful extensions: 5424
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5421
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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