ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd0g02 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 247 bits (630), Expect(2) = 4e-75 Identities = 119/120 (99%), Positives = 120/120 (100%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD Sbjct: 345 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 404 Query: 294 TYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115 TYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 405 TYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464 Score = 54.3 bits (129), Expect(2) = 4e-75 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 VVKIVDTFPGQSIDFFGALRARVYD+ Sbjct: 320 VVKIVDTFPGQSIDFFGALRARVYDD 345
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 188 bits (478), Expect(2) = 5e-56 Identities = 86/118 (72%), Positives = 104/118 (88%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD Sbjct: 353 DEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLAD 412 Query: 294 TYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 121 YMS AALGDAN+DA+ G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 413 QYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470 Score = 48.9 bits (115), Expect(2) = 5e-56 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 VVK+VD FPGQSIDFFGALRARVY + Sbjct: 328 VVKLVDAFPGQSIDFFGALRARVYHD 353
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 187 bits (476), Expect(2) = 1e-55 Identities = 89/120 (74%), Positives = 105/120 (87%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+ Sbjct: 355 DEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAE 414 Query: 294 TYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115 TY+SQAALGDAN DA+ G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 415 TYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474 Score = 48.5 bits (114), Expect(2) = 1e-55 Identities = 21/26 (80%), Positives = 24/26 (92%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 +V +VD FPGQSIDFFGALRARVYD+ Sbjct: 330 IVTLVDQFPGQSIDFFGALRARVYDD 355
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 183 bits (464), Expect(2) = 8e-55 Identities = 87/122 (71%), Positives = 102/122 (83%), Gaps = 2/122 (1%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLAD 414 Query: 294 TYMSQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLY 121 YMS+AALGDAN DA+K G+FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y Sbjct: 415 KYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474 Query: 120 TF 115 F Sbjct: 475 KF 476 Score = 50.4 bits (119), Expect(2) = 8e-55 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 +VK+VDTFPGQSIDFFGALRARVY + Sbjct: 330 IVKLVDTFPGQSIDFFGALRARVYHD 355
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 145 bits (366), Expect(2) = 4e-44 Identities = 67/84 (79%), Positives = 77/84 (91%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Sbjct: 342 DEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLAD 401 Query: 294 TYMSQAALGDANQDAMKTGSFYGK 223 Y+S+AALG AN DAMKTG+FYGK Sbjct: 402 KYLSEAALGQANDDAMKTGAFYGK 425 Score = 52.4 bits (124), Expect(2) = 4e-44 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 VV++VDTFPGQSIDFFGALRARVYD+ Sbjct: 317 VVRLVDTFPGQSIDFFGALRARVYDD 342
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 142 bits (359), Expect(2) = 2e-43 Identities = 66/83 (79%), Positives = 77/83 (92%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Sbjct: 345 DEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAE 404 Query: 294 TYMSQAALGDANQDAMKTGSFYG 226 Y+S+AALGDAN DAMKTGSFYG Sbjct: 405 QYLSEAALGDANSDAMKTGSFYG 427 Score = 52.4 bits (124), Expect(2) = 2e-43 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 +VKIVD+FPGQSIDFFGALRARVYD+ Sbjct: 320 IVKIVDSFPGQSIDFFGALRARVYDD 345
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 137 bits (344), Expect(2) = 8e-42 Identities = 62/83 (74%), Positives = 76/83 (91%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 414 Query: 294 TYMSQAALGDANQDAMKTGSFYG 226 Y+S+AALGDAN DAM TG+FYG Sbjct: 415 KYLSEAALGDANSDAMNTGTFYG 437 Score = 53.1 bits (126), Expect(2) = 8e-42 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 +VK+VDTFPGQSIDFFGALRARVYD+ Sbjct: 330 IVKLVDTFPGQSIDFFGALRARVYDD 355
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 134 bits (338), Expect(2) = 8e-41 Identities = 60/82 (73%), Positives = 76/82 (92%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Sbjct: 351 DEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLAD 410 Query: 294 TYMSQAALGDANQDAMKTGSFY 229 Y+++AALG+AN+DAMKTGSF+ Sbjct: 411 KYLNEAALGEANEDAMKTGSFF 432 Score = 52.0 bits (123), Expect(2) = 8e-41 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 VV++VDTFPGQSIDFFGALRARVYD+ Sbjct: 326 VVQLVDTFPGQSIDFFGALRARVYDD 351
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 129 bits (324), Expect(2) = 9e-40 Identities = 62/81 (76%), Positives = 72/81 (88%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 359 DEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAE 418 Query: 294 TYMSQAALGDANQDAMKTGSF 232 TY+ +AALGDAN DA+ TG+F Sbjct: 419 TYLKEAALGDANADAINTGNF 439 Score = 53.9 bits (128), Expect(2) = 9e-40 Identities = 24/26 (92%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 V+KIVDTFPGQSIDFFGALRARVYD+ Sbjct: 334 VIKIVDTFPGQSIDFFGALRARVYDD 359
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 129 bits (323), Expect(2) = 3e-39 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 354 DEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAE 413 Query: 294 TYMSQAALGDANQDAMKTG 238 TY+ +AALGDAN DA+ TG Sbjct: 414 TYLKEAALGDANADAINTG 432 Score = 52.8 bits (125), Expect(2) = 3e-39 Identities = 24/26 (92%), Positives = 26/26 (100%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 VVKIVD+FPGQSIDFFGALRARVYD+ Sbjct: 329 VVKIVDSFPGQSIDFFGALRARVYDD 354
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 129 bits (324), Expect(2) = 3e-39 Identities = 61/82 (74%), Positives = 71/82 (86%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 418 Query: 294 TYMSQAALGDANQDAMKTGSFY 229 Y+ +AALGDAN DA+ GSF+ Sbjct: 419 KYLKEAALGDANADAINNGSFF 440 Score = 52.4 bits (124), Expect(2) = 3e-39 Identities = 24/26 (92%), Positives = 25/26 (96%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 VVKIVD FPGQSIDFFGALRARVYD+ Sbjct: 334 VVKIVDNFPGQSIDFFGALRARVYDD 359
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 130 bits (327), Expect(2) = 3e-39 Identities = 59/81 (72%), Positives = 74/81 (91%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLAD 414 Query: 294 TYMSQAALGDANQDAMKTGSF 232 YMS+AALGDANQDA+K G+F Sbjct: 415 KYMSEAALGDANQDAIKRGTF 435 Score = 51.2 bits (121), Expect(2) = 3e-39 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 +VK+VD FPGQSIDFFGALRARVYD+ Sbjct: 330 IVKVVDQFPGQSIDFFGALRARVYDD 355
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 122 bits (307), Expect(2) = 4e-37 Identities = 53/82 (64%), Positives = 75/82 (91%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Sbjct: 357 DEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLAD 416 Query: 294 TYMSQAALGDANQDAMKTGSFY 229 Y+++AALG+AN+DA+K+GSF+ Sbjct: 417 KYLNEAALGNANEDAIKSGSFF 438 Score = 51.6 bits (122), Expect(2) = 4e-37 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 + K+VDTFPGQSIDFFGALRARVYD+ Sbjct: 332 ITKLVDTFPGQSIDFFGALRARVYDD 357
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 122 bits (305), Expect(2) = 2e-35 Identities = 53/82 (64%), Positives = 74/82 (90%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 295 +EVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLAD 418 Query: 294 TYMSQAALGDANQDAMKTGSFY 229 Y+++AALG+AN+DA+K+GSF+ Sbjct: 419 QYLNEAALGNANEDAIKSGSFF 440 Score = 46.6 bits (109), Expect(2) = 2e-35 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 +V++VD PGQSIDFFGALRARVYD+ Sbjct: 334 IVELVDKHPGQSIDFFGALRARVYDD 359
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 66.6 bits (161), Expect(2) = 1e-19 Identities = 33/66 (50%), Positives = 46/66 (69%) Frame = -2 Query: 468 VRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 289 VR+W+ TG++ IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y Sbjct: 330 VRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAY 388 Query: 288 MSQAAL 271 +S A L Sbjct: 389 LSGAEL 394 Score = 49.3 bits (116), Expect(2) = 1e-19 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 V +VDTFPGQSIDFFGALRARVYD+ Sbjct: 303 VENLVDTFPGQSIDFFGALRARVYDD 328
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 87.4 bits (215), Expect = 2e-17 Identities = 39/58 (67%), Positives = 49/58 (84%) Frame = -2 Query: 474 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 301 +EVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 352 DEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409 Score = 53.5 bits (127), Expect = 4e-07 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 6/50 (12%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE------*GAQVGRLYRNREHWQEA 419 +VK+VDTFPGQSIDFFGALRARVYD+ G V R+ RN + +E+ Sbjct: 327 IVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKES 376
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 52.4 bits (124), Expect(2) = 4e-14 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -2 Query: 471 EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADT 292 ++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Sbjct: 229 QIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDE 288 Query: 291 Y 289 Y Sbjct: 289 Y 289 Score = 44.7 bits (104), Expect(2) = 4e-14 Identities = 19/26 (73%), Positives = 23/26 (88%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYDE 473 V K+VD+FP QSIDFF ALR+R+YDE Sbjct: 203 VEKLVDSFPNQSIDFFSALRSRIYDE 228
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 37.7 bits (86), Expect(2) = 1e-05 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -1 Query: 541 IVDTFPGQSIDFFGALR 491 +VDTFPGQSIDFFGALR Sbjct: 1 LVDTFPGQSIDFFGALR 17 Score = 30.8 bits (68), Expect(2) = 1e-05 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -2 Query: 408 RDGPVTFEQPKMTVEK 361 R+GP TFEQP MT+EK Sbjct: 17 REGPPTFEQPAMTIEK 32
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/25 (68%), Positives = 22/25 (88%) Frame = -1 Query: 550 VVKIVDTFPGQSIDFFGALRARVYD 476 + ++VDTFP QSIDFF ALR+R+YD Sbjct: 203 IEQLVDTFPKQSIDFFSALRSRIYD 227
>Y778_AQUAE (O66974) Hypothetical UPF0052 protein aq_778| Length = 328 Score = 34.7 bits (78), Expect = 0.19 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = +2 Query: 392 VTGPSREFTSLLPMFSIP-----VEPTHLRTSFVVHPSTQSTEKVNGLSWEXVD 538 + GP FTS+LP F +P V+ + FVV+ TQ E N +W+ +D Sbjct: 188 IIGPGSLFTSILPNFLVPQIREAVKESRALKVFVVNVMTQPGETDNFTAWDHID 241
>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/102 (23%), Positives = 43/102 (42%) Frame = -2 Query: 486 GCTTNEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 307 G TTN E + K + + DGP++ E +T + ++E + + DNV V Sbjct: 24 GVTTNPTIISREGRDFETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-V 82 Query: 306 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCT 181 ++ T A +++ +KT QG + + G T Sbjct: 83 KIPMTTEGLKATNILSKEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/102 (23%), Positives = 43/102 (42%) Frame = -2 Query: 486 GCTTNEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 307 G TTN E + K + + DGP++ E +T + ++E + + DNV V Sbjct: 24 GVTTNPTIISREGRDFETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-V 82 Query: 306 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCT 181 ++ T A +++ +KT QG + + G T Sbjct: 83 KIPMTTEGLKATNILSKEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/102 (23%), Positives = 43/102 (42%) Frame = -2 Query: 486 GCTTNEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 307 G TTN E + K + + DGP++ E +T + ++E + + DNV V Sbjct: 24 GVTTNPTIISREGRDFETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-V 82 Query: 306 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCT 181 ++ T A +++ +KT QG + + G T Sbjct: 83 KIPMTTEGLKATNILSKEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/102 (23%), Positives = 43/102 (42%) Frame = -2 Query: 486 GCTTNEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 307 G TTN E + K + + DGP++ E +T + ++E + + DNV V Sbjct: 24 GVTTNPTIISREGRDFETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-V 82 Query: 306 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCT 181 ++ T A +++ +KT QG + + G T Sbjct: 83 KIPMTTEGLKATNILSKEGIKTNVTLIFTVSQGLMAMKAGAT 124
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +2 Query: 188 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 364 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 365 STVI 376 I Sbjct: 302 QAFI 305
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%) Frame = -2 Query: 504 SVLCVLGCTTNEVR-----KWVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 352 S L VL T N R W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 202 SSLQVLRLTENPWRCDCALHWLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 4.7 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 293 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 397 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>TAL_AQUAE (O66520) Probable transaldolase (EC 2.2.1.2)| Length = 217 Score = 30.0 bits (66), Expect = 4.7 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -2 Query: 486 GCTTNEVRKWVGSTG--IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 316 G TTN + TG + + K ++ DGPV+ E + E ++ G ML + +NV Sbjct: 24 GVTTNPTL--ISKTGRPFKEVVKEILELVDGPVSLETVSLDAEGMIREGRMLAELGENV 80
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 6.1 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -1 Query: 241 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 134 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 6.1 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +1 Query: 118 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 291 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 292 GVSKLHTLDIVLL 330 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 336 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 169 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 336 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 169 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 336 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 169 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 336 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 169 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DAPB_CHRVO (Q7NX34) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)| Length = 267 Score = 29.3 bits (64), Expect = 8.0 Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 6/121 (4%) Frame = -2 Query: 492 VLGCTTNEVRKWVGSTGIENIGKRLVNSRDGPV------TFEQPKMTVEKLLEYGHMLVQ 331 +L C VR +G+TG ++ GK + + G + F KLL+ ++ Sbjct: 85 MLACVERGVRMVIGTTGFDDEGKAAIRAAAGKIGIVFASNFSVGVNLTFKLLDMAARVLN 144 Query: 330 EQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPT 151 E +V+ ++ + A G A + G+ +Q + EG T + DP Sbjct: 145 EGYDVEIIEAHHRFKVDAPSGTALRMGEVIADALGRDLKQCAVYGREGVTGER----DPQ 200 Query: 150 A 148 A Sbjct: 201 A 201
>QUEA_SYNPX (Q7U8E8) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 366 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +2 Query: 440 IPVEPTHLRTSFVVHPSTQSTEKV-NGLSWEXVDDL 544 +P EP H +V P+TQ+ E +G+ W+ +++L Sbjct: 24 VPAEPRHSARMLMVPPATQALEAARHGVVWDLLEEL 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,470,131 Number of Sequences: 219361 Number of extensions: 1579025 Number of successful extensions: 4625 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4486 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4622 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
