ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd0g01 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 167 bits (424), Expect(3) = 2e-66 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD Sbjct: 345 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 404 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 TYMSQAALGDANQDAMKTGSFYG Sbjct: 405 TYMSQAALGDANQDAMKTGSFYG 427 Score = 86.3 bits (212), Expect(3) = 2e-66 Identities = 38/38 (100%), Positives = 38/38 (100%) Frame = -3 Query: 235 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464 Score = 39.7 bits (91), Expect(3) = 2e-66 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 328 PGQSIDFFGALRARVYDD 345
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 127 bits (318), Expect(3) = 8e-49 Identities = 61/83 (73%), Positives = 73/83 (87%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+ Sbjct: 355 DEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAE 414 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 TY+SQAALGDAN DA+ G+FYG Sbjct: 415 TYLSQAALGDANADAIGRGTFYG 437 Score = 67.8 bits (164), Expect(3) = 8e-49 Identities = 29/38 (76%), Positives = 33/38 (86%) Frame = -3 Query: 235 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122 GKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474 Score = 39.7 bits (91), Expect(3) = 8e-49 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 338 PGQSIDFFGALRARVYDD 355
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 130 bits (327), Expect(3) = 1e-48 Identities = 60/83 (72%), Positives = 73/83 (87%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLAD 414 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 YMS+AALGDAN DA+K G+FYG Sbjct: 415 KYMSEAALGDANNDAIKRGTFYG 437 Score = 66.6 bits (161), Expect(3) = 1e-48 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%) Frame = -3 Query: 238 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122 GG+ AQQ G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476 Score = 37.0 bits (84), Expect(3) = 1e-48 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVY + Sbjct: 338 PGQSIDFFGALRARVYHD 355
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 131 bits (330), Expect(3) = 3e-48 Identities = 59/83 (71%), Positives = 75/83 (90%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD Sbjct: 353 DEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLAD 412 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 YMS AALGDAN+DA+ G+F+G Sbjct: 413 QYMSSAALGDANKDAIDRGTFFG 435 Score = 63.9 bits (154), Expect(3) = 3e-48 Identities = 28/36 (77%), Positives = 30/36 (83%) Frame = -3 Query: 235 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 128 GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470 Score = 37.0 bits (84), Expect(3) = 3e-48 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVY + Sbjct: 336 PGQSIDFFGALRARVYHD 353
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 143 bits (361), Expect(2) = 1e-39 Identities = 66/83 (79%), Positives = 76/83 (91%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Sbjct: 342 DEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLAD 401 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 Y+S+AALG AN DAMKTG+FYG Sbjct: 402 KYLSEAALGQANDDAMKTGAFYG 424 Score = 39.7 bits (91), Expect(2) = 1e-39 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 325 PGQSIDFFGALRARVYDD 342
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 142 bits (359), Expect(2) = 2e-39 Identities = 66/83 (79%), Positives = 77/83 (92%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Sbjct: 345 DEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAE 404 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 Y+S+AALGDAN DAMKTGSFYG Sbjct: 405 QYLSEAALGDANSDAMKTGSFYG 427 Score = 39.7 bits (91), Expect(2) = 2e-39 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 328 PGQSIDFFGALRARVYDD 345
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 137 bits (344), Expect(2) = 9e-38 Identities = 62/83 (74%), Positives = 76/83 (91%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 414 Query: 351 TYMSQAALGDANQDAMKTGSFYG 283 Y+S+AALGDAN DAM TG+FYG Sbjct: 415 KYLSEAALGDANSDAMNTGTFYG 437 Score = 39.7 bits (91), Expect(2) = 9e-38 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 338 PGQSIDFFGALRARVYDD 355
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 134 bits (338), Expect(2) = 4e-37 Identities = 60/82 (73%), Positives = 76/82 (92%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Sbjct: 351 DEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLAD 410 Query: 351 TYMSQAALGDANQDAMKTGSFY 286 Y+++AALG+AN+DAMKTGSF+ Sbjct: 411 KYLNEAALGEANEDAMKTGSFF 432 Score = 39.7 bits (91), Expect(2) = 4e-37 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 334 PGQSIDFFGALRARVYDD 351
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 130 bits (327), Expect(2) = 8e-36 Identities = 59/81 (72%), Positives = 74/81 (91%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLAD 414 Query: 351 TYMSQAALGDANQDAMKTGSF 289 YMS+AALGDANQDA+K G+F Sbjct: 415 KYMSEAALGDANQDAIKRGTF 435 Score = 39.7 bits (91), Expect(2) = 8e-36 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 338 PGQSIDFFGALRARVYDD 355
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 129 bits (324), Expect(2) = 2e-35 Identities = 61/82 (74%), Positives = 71/82 (86%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 418 Query: 351 TYMSQAALGDANQDAMKTGSFY 286 Y+ +AALGDAN DA+ GSF+ Sbjct: 419 KYLKEAALGDANADAINNGSFF 440 Score = 39.7 bits (91), Expect(2) = 2e-35 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 342 PGQSIDFFGALRARVYDD 359
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 129 bits (324), Expect(2) = 2e-35 Identities = 62/81 (76%), Positives = 72/81 (88%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 359 DEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAE 418 Query: 351 TYMSQAALGDANQDAMKTGSF 289 TY+ +AALGDAN DA+ TG+F Sbjct: 419 TYLKEAALGDANADAINTGNF 439 Score = 39.7 bits (91), Expect(2) = 2e-35 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 342 PGQSIDFFGALRARVYDD 359
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 129 bits (323), Expect(2) = 2e-35 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 354 DEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAE 413 Query: 351 TYMSQAALGDANQDAMKTG 295 TY+ +AALGDAN DA+ TG Sbjct: 414 TYLKEAALGDANADAINTG 432 Score = 39.7 bits (91), Expect(2) = 2e-35 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 337 PGQSIDFFGALRARVYDD 354
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 122 bits (307), Expect(2) = 2e-33 Identities = 53/82 (64%), Positives = 75/82 (91%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Sbjct: 357 DEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLAD 416 Query: 351 TYMSQAALGDANQDAMKTGSFY 286 Y+++AALG+AN+DA+K+GSF+ Sbjct: 417 KYLNEAALGNANEDAIKSGSFF 438 Score = 39.7 bits (91), Expect(2) = 2e-33 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 340 PGQSIDFFGALRARVYDD 357
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 122 bits (305), Expect(2) = 3e-33 Identities = 53/82 (64%), Positives = 74/82 (90%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 352 +EVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLAD 418 Query: 351 TYMSQAALGDANQDAMKTGSFY 286 Y+++AALG+AN+DA+K+GSF+ Sbjct: 419 QYLNEAALGNANEDAIKSGSFF 440 Score = 39.7 bits (91), Expect(2) = 3e-33 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 342 PGQSIDFFGALRARVYDD 359
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 87.4 bits (215), Expect = 3e-17 Identities = 39/58 (67%), Positives = 49/58 (84%) Frame = -1 Query: 531 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 358 +EVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 352 DEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 6/42 (14%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE------*GAQVGRLYRNREHWQEA 476 PGQSIDFFGALRARVYD+ G V R+ RN + +E+ Sbjct: 335 PGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKES 376
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 66.6 bits (161), Expect(2) = 8e-17 Identities = 33/66 (50%), Positives = 46/66 (69%) Frame = -1 Query: 525 VRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 346 VR+W+ TG++ IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y Sbjct: 330 VRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAY 388 Query: 345 MSQAAL 328 +S A L Sbjct: 389 LSGAEL 394 Score = 39.7 bits (91), Expect(2) = 8e-17 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 PGQSIDFFGALRARVYD+ Sbjct: 311 PGQSIDFFGALRARVYDD 328
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 52.4 bits (124), Expect(2) = 4e-11 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -1 Query: 528 EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADT 349 ++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Sbjct: 229 QIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDE 288 Query: 348 Y 346 Y Sbjct: 289 Y 289 Score = 34.7 bits (78), Expect(2) = 4e-11 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -3 Query: 583 PGQSIDFFGALRARVYDE 530 P QSIDFF ALR+R+YDE Sbjct: 211 PNQSIDFFSALRSRIYDE 228
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 30.8 bits (68), Expect(2) = 0.004 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 465 RDGPVTFEQPKMTVEK 418 R+GP TFEQP MT+EK Sbjct: 17 REGPPTFEQPAMTIEK 32 Score = 28.9 bits (63), Expect(2) = 0.004 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -3 Query: 583 PGQSIDFFGALR 548 PGQSIDFFGALR Sbjct: 6 PGQSIDFFGALR 17
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 32.0 bits (71), Expect = 1.3 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -3 Query: 583 PGQSIDFFGALRARVYD 533 P QSIDFF ALR+R+YD Sbjct: 211 PKQSIDFFSALRSRIYD 227
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)| (EF-1AO) (42S p48) Length = 461 Score = 31.6 bits (70), Expect = 1.8 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Frame = -1 Query: 453 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 298 VTF +T E K +E H +QE NVK + + D A N M+ Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337 Query: 297 GSFYG*KILHTHPPSLAA 244 GSF I+ HP ++A Sbjct: 338 GSFTAQVIILNHPGQISA 355
>Y778_AQUAE (O66974) Hypothetical UPF0052 protein aq_778| Length = 328 Score = 30.8 bits (68), Expect = 3.0 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +2 Query: 449 VTGPSREFTSLLPMFSIP-----VEPTHLRTSFVVHPSTQSTEKVNGLSW 583 + GP FTS+LP F +P V+ + FVV+ TQ E N +W Sbjct: 188 IIGPGSLFTSILPNFLVPQIREAVKESRALKVFVVNVMTQPGETDNFTAW 237
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 30.4 bits (67), Expect = 3.9 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%) Frame = -1 Query: 561 SVLCVLGCTTNEVR-----KWVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 409 S L VL T N R W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 202 SSLQVLRLTENPWRCDCALHWLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>TAL_AQUAE (O66520) Probable transaldolase (EC 2.2.1.2)| Length = 217 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 543 GCTTNEVRKWVGSTG--IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 373 G TTN + TG + + K ++ DGPV+ E + E ++ G ML + +NV Sbjct: 24 GVTTNPTL--ISKTGRPFKEVVKEILELVDGPVSLETVSLDAEGMIREGRMLAELGENV 80
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)| Length = 464 Score = 30.0 bits (66), Expect = 5.1 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = -1 Query: 453 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 298 VTF +T E K +E H +QE NVK + + D A N A +T Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337 Query: 297 GSFYG*KILHTHPPSLAA 244 F I+ HP ++A Sbjct: 338 KMFTAQVIIMNHPGQISA 355
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 5.1 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 350 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 454 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)| Length = 462 Score = 29.3 bits (64), Expect = 8.7 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Frame = -1 Query: 453 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 298 VTF +T E K +E H + E NVK V + D A N M+ Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337 Query: 297 GSFYG*KILHTHPPSLAA 244 GSF I+ HP + A Sbjct: 338 GSFTAQVIILNHPGQIGA 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,020,656 Number of Sequences: 219361 Number of extensions: 1687677 Number of successful extensions: 5107 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4920 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5105 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
