>ITA5_HUMAN (P08648) Integrin alpha-5 precursor (Fibronectin receptor alpha|
           subunit) (Integrin alpha-F) (VLA-5) (CD49e antigen)
           [Contains: Integrin alpha-5 heavy chain; Integrin
           alpha-5 light chain]
          Length = 1049

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 21/58 (36%), Positives = 25/58 (43%)
 Frame = +1

Query: 52  PLGILYLPTCVGFGYRYPFVEGRSSFSWEYGIGYILQRRSAWYEPRGEAIASPRGSYF 225
           P+G  YL T   F     +   RS FSW  G GY     SA +   G  +    GSYF
Sbjct: 172 PVGTCYLSTD-NFTRILEYAPCRSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGPGSYF 228

>DOK1_MOUSE (P97465) Docking protein 1 (Downstream of tyrosine kinase 1)|
           (p62(dok))
          Length = 482

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
 Frame = -3

Query: 218 EPRGLAIASPRGSY------------QALRR*SM*PMPYSQEKLERPSTKGYLYPKPTQV 75
           EP GLA A PRG Y            QA  +     +PY+      P+T  Y  P P   
Sbjct: 363 EPEGLAPAPPRGLYDLPQEPRDAWWCQARLKEEGYELPYN------PATDDYAVPPP--- 413

Query: 74  GR*RIPRGHPXLPEVTGLLLP 12
              R P+  P  P+  GL+LP
Sbjct: 414 ---RSPKPAPA-PKPQGLILP 430

>YBIC_ECOLI (P30178) Hypothetical oxidoreductase ybiC (EC 1.1.1.-)|
          Length = 361

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 162 LKYVTDAILPGKARTTFNKRVPVP 91
           L Y T AI  GK R  ++K VPVP
Sbjct: 179 LDYATSAIAFGKTRVAWHKGVPVP 202

>YBIC_ECO57 (P58409) Hypothetical oxidoreductase ybiC (EC 1.1.1.-)|
          Length = 361

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 162 LKYVTDAILPGKARTTFNKRVPVP 91
           L Y T AI  GK R  ++K VPVP
Sbjct: 179 LDYATSAIAFGKTRVAWHKGVPVP 202

>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 4   GTRGNNSPVTSGXKGCPLGILYLPTCVGFGYRYP 105
           G  GN  P+  G  G P+G+   P  +G G  YP
Sbjct: 697 GPMGNMGPMGGGPMGGPMGVGPKPMTMGGGKMYP 730

>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase XNP) (X-linked nuclear protein)
           (dXNP) (d-xnp)
          Length = 1311

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 157 VCNRCHTPRKSSNDLQQKGTCTRNRHRWVGREYLGGTPXXPKLRGYYC 14
           VC+  H  +     + +  T  R + R V    L GTP    LR YYC
Sbjct: 613 VCDEGHLLKNEKTSISKAVTRMRTKRRIV----LTGTPLQNNLREYYC 656


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,323,757
Number of Sequences: 219361
Number of extensions: 872927
Number of successful extensions: 2271
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)